| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219560
Identifier: 183219560
GI number: 183219560
Start: 133073
End: 134260
Strand: Direct
Name: 183219560
Synonym: LEPBI_I0134
Alternate gene names: NA
Gene position: 133073-134260 (Clockwise)
Preceding gene: 183219558
Following gene: 183219561
Centisome position: 3.7
GC content: 37.63
Gene sequence:
>1188_bases TTGAATTGGAGTTTTAGTGTGCTGGAATGTTTTTATCTTATGAATCATTCCCTTCGTCCCTTCCTTTTTGCCGTATTTGC CCTTGTATGCCTAGAATCCTTCGTTTCCTGTTCCCAAAAAGAACATCCTTCTGAACTCGAGATTCGGCTTGCGGTGTATG GCAAAGAAGCTGGGGATCCCATCCGCATCCTTGGTCAAAAACAAATCAATTTGGATGAAACTCCAGAAATGGAAACTTTG GTTCTCTTTCAATCCGGACAAAGCGAGGTTTTATCGGCATTTCGGAAAGAAGGATCTAGTTGGACGTTTTTATGGAAGTT GGAATTTTTTCTCAAAAATTTGGGGCCGATGTATTATGACGGCAAACAAAATGTTTGGCTTCCAGGATCTGTGTCAGGAA AAGAAAAACCGTTGTTTGCTGGCGATTGTTTCAGACGTATCGTTCTTGCTGAACTTCCTGGAGATAATTTTAATTCCGTG TTTGTTGAAGTAATGTCCGAAGAACCACCGTTAGGTTTGTTTTCGGTTCCTATGGGATATAGAAAAGGTAAAAAAATTTG GGACGGTTTCCAACTAAAAGAACATGAAGAATTAAAACGAAGTAAACGTGTAGATTTTGAATACAGCGCGAAGGAAAAAT CGTTTCGAATCTTTCCAACCAATCCTAACTATTCGCAGGAATTTGTGTTCAATGGATGGGAAATGATTGCAAACCTACCA ATGCAACCTGTGCCATCCTTTATCTCTTTAGATGTGGAACCAAAATTTCAAATTGGAAAAGAATCGCTTGTGACTTTGCA ATTAAAGAATAGAGGGAATTATGTGAGTTTAACTTACCTTTCCGTGTCTTTCCCGGAAGTTGGTTCTGTTCGTTTGGTTA ACGAAACACAAGGTGTCCGTCTTTATAAAAAAGGTGATATTGTTTACAATGTCGTTCAAAATAAAAAAATCCCGGCCGAA TATCCATTACTGGAAGTAACAAAAGAAGGATGGGCCAATCATTTTCGTTATGGAATCAAATTTTATTACACACCAAAATC CACTGATGCTCCAAAAATTTTATTTCGTTCTACGTATAAATTTTACCAAGAAATTATTTCCATTCCCAATCAATATTCCA TAGCACCGTATGAAAGAGACCAACAAGGATTTCCTTCGTATATTTTGAATCAAGTGACAGAAAAATGA
Upstream 100 bases:
>100_bases CACTGAATCCAAGCCAACAACAGTCGAAACCAATGTCGTCCCCAATTCTTACTACTTAGACGATGATAATCAATCGAATG GTTACGAAAAGCAAAAAAGG
Downstream 100 bases:
>100_bases AATCAGTCTGCCAATCAAATGTCTCAATGAATCAATATGTACTCTCACAAAGATTCGTTTTATTTTATGACGAATGTAAG TTGAAATCGTAATGAAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MNWSFSVLECFYLMNHSLRPFLFAVFALVCLESFVSCSQKEHPSELEIRLAVYGKEAGDPIRILGQKQINLDETPEMETL VLFQSGQSEVLSAFRKEGSSWTFLWKLEFFLKNLGPMYYDGKQNVWLPGSVSGKEKPLFAGDCFRRIVLAELPGDNFNSV FVEVMSEEPPLGLFSVPMGYRKGKKIWDGFQLKEHEELKRSKRVDFEYSAKEKSFRIFPTNPNYSQEFVFNGWEMIANLP MQPVPSFISLDVEPKFQIGKESLVTLQLKNRGNYVSLTYLSVSFPEVGSVRLVNETQGVRLYKKGDIVYNVVQNKKIPAE YPLLEVTKEGWANHFRYGIKFYYTPKSTDAPKILFRSTYKFYQEIISIPNQYSIAPYERDQQGFPSYILNQVTEK
Sequences:
>Translated_395_residues MNWSFSVLECFYLMNHSLRPFLFAVFALVCLESFVSCSQKEHPSELEIRLAVYGKEAGDPIRILGQKQINLDETPEMETL VLFQSGQSEVLSAFRKEGSSWTFLWKLEFFLKNLGPMYYDGKQNVWLPGSVSGKEKPLFAGDCFRRIVLAELPGDNFNSV FVEVMSEEPPLGLFSVPMGYRKGKKIWDGFQLKEHEELKRSKRVDFEYSAKEKSFRIFPTNPNYSQEFVFNGWEMIANLP MQPVPSFISLDVEPKFQIGKESLVTLQLKNRGNYVSLTYLSVSFPEVGSVRLVNETQGVRLYKKGDIVYNVVQNKKIPAE YPLLEVTKEGWANHFRYGIKFYYTPKSTDAPKILFRSTYKFYQEIISIPNQYSIAPYERDQQGFPSYILNQVTEK >Mature_395_residues MNWSFSVLECFYLMNHSLRPFLFAVFALVCLESFVSCSQKEHPSELEIRLAVYGKEAGDPIRILGQKQINLDETPEMETL VLFQSGQSEVLSAFRKEGSSWTFLWKLEFFLKNLGPMYYDGKQNVWLPGSVSGKEKPLFAGDCFRRIVLAELPGDNFNSV FVEVMSEEPPLGLFSVPMGYRKGKKIWDGFQLKEHEELKRSKRVDFEYSAKEKSFRIFPTNPNYSQEFVFNGWEMIANLP MQPVPSFISLDVEPKFQIGKESLVTLQLKNRGNYVSLTYLSVSFPEVGSVRLVNETQGVRLYKKGDIVYNVVQNKKIPAE YPLLEVTKEGWANHFRYGIKFYYTPKSTDAPKILFRSTYKFYQEIISIPNQYSIAPYERDQQGFPSYILNQVTEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45718; Mature: 45718
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWSFSVLECFYLMNHSLRPFLFAVFALVCLESFVSCSQKEHPSELEIRLAVYGKEAGDP CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCC IRILGQKQINLDETPEMETLVLFQSGQSEVLSAFRKEGSSWTFLWKLEFFLKNLGPMYYD EEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCEEEEEEHHHHHHHCCCEEEC GKQNVWLPGSVSGKEKPLFAGDCFRRIVLAELPGDNFNSVFVEVMSEEPPLGLFSVPMGY CCCCEEECCCCCCCCCCEEHHHHHHHHHHEECCCCCHHHHHHEEECCCCCCCEEECCCCC RKGKKIWDGFQLKEHEELKRSKRVDFEYSAKEKSFRIFPTNPNYSQEFVFNGWEMIANLP CCCCCCCCCCCCCHHHHHHHHHCCCCEECCCCCCEEEEECCCCCCHHHHHCHHHHHHCCC MQPVPSFISLDVEPKFQIGKESLVTLQLKNRGNYVSLTYLSVSFPEVGSVRLVNETQGVR CCCCCCCEEECCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEECCCCCCEEEEECCCCEE LYKKGDIVYNVVQNKKIPAEYPLLEVTKEGWANHFRYGIKFYYTPKSTDAPKILFRSTYK EEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHEEECEEEEECCCCCCCCHHHHHHHHH FYQEIISIPNQYSIAPYERDQQGFPSYILNQVTEK HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MNWSFSVLECFYLMNHSLRPFLFAVFALVCLESFVSCSQKEHPSELEIRLAVYGKEAGDP CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCC IRILGQKQINLDETPEMETLVLFQSGQSEVLSAFRKEGSSWTFLWKLEFFLKNLGPMYYD EEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCEEEEEEHHHHHHHCCCEEEC GKQNVWLPGSVSGKEKPLFAGDCFRRIVLAELPGDNFNSVFVEVMSEEPPLGLFSVPMGY CCCCEEECCCCCCCCCCEEHHHHHHHHHHEECCCCCHHHHHHEEECCCCCCCEEECCCCC RKGKKIWDGFQLKEHEELKRSKRVDFEYSAKEKSFRIFPTNPNYSQEFVFNGWEMIANLP CCCCCCCCCCCCCHHHHHHHHHCCCCEECCCCCCEEEEECCCCCCHHHHHCHHHHHHCCC MQPVPSFISLDVEPKFQIGKESLVTLQLKNRGNYVSLTYLSVSFPEVGSVRLVNETQGVR CCCCCCCEEECCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEECCCCCCEEEEECCCCEE LYKKGDIVYNVVQNKKIPAEYPLLEVTKEGWANHFRYGIKFYYTPKSTDAPKILFRSTYK EEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHEEECEEEEECCCCCCCCHHHHHHHHH FYQEIISIPNQYSIAPYERDQQGFPSYILNQVTEK HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA