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The map label for this gene is ssb

Identifier: 18311623

GI number: 18311623

Start: 3015572

End: 3016024

Strand: Reverse

Name: ssb

Synonym: CPE2641

Alternate gene names: 18311623

Gene position: 3016024-3015572 (Counterclockwise)

Preceding gene: 18311624

Following gene: 18311622

Centisome position: 99.49

GC content: 36.2

Gene sequence:

>453_bases
ATGAATAAAGTAGTTTTAATTGGTAGACTTACTAAAGATCCAGAGCTTAGATTTGCAGCAGGAAGCGGTACAGCAGTTGC
AAGATTTACACTAGCTGTAAATAGACAATTCAAAAAAGATGAAGCTGATTTTATCAGTTGCATAGCTTTTGGAAAAACTG
GTGAGACCATAGCTCAATATATTACTAAAGGCAGACAATTGGCTGTTTCAGGAAATATAAGAACTGGAAGTTATGAAGCT
CAAGATGGAACTAGAAGATATACTACTGACGTAGTTGTTGAAAGTTTTGACTTTATCGATTCAGGAAATGGCGGAGCAAG
AGGAAACTCAGGCTTTGGTTCAGGAAATGATTTCGGTGGTTCTTTCGGTATGCCAGACAATTCATTTAGTGATTCATCAT
TCAATAGTAATGATGATATGACACCAATTGATGATGGAGACATTCCATTCTAA

Upstream 100 bases:

>100_bases
AACCCAGAATTACCAAAAGAGTTAGACAGAGTATTCGGAATAACTGACGGAATAATCAGACACATCATCGTTAAAGAAGA
GCAATAAGAGGTGGTCGTAA

Downstream 100 bases:

>100_bases
TTCAGATTTTAGGTAAGGAGGGAAATAGTGATGAGTAACGTAAAAAGAGGCGGAAAATTCAGAAGAGCAAGAAAAAAAGT
TTGCATATTCTGCGTTGATA

Product: phage-related single-strand DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MNKVVLIGRLTKDPELRFAAGSGTAVARFTLAVNRQFKKDEADFISCIAFGKTGETIAQYITKGRQLAVSGNIRTGSYEA
QDGTRRYTTDVVVESFDFIDSGNGGARGNSGFGSGNDFGGSFGMPDNSFSDSSFNSNDDMTPIDDGDIPF

Sequences:

>Translated_150_residues
MNKVVLIGRLTKDPELRFAAGSGTAVARFTLAVNRQFKKDEADFISCIAFGKTGETIAQYITKGRQLAVSGNIRTGSYEA
QDGTRRYTTDVVVESFDFIDSGNGGARGNSGFGSGNDFGGSFGMPDNSFSDSSFNSNDDMTPIDDGDIPF
>Mature_150_residues
MNKVVLIGRLTKDPELRFAAGSGTAVARFTLAVNRQFKKDEADFISCIAFGKTGETIAQYITKGRQLAVSGNIRTGSYEA
QDGTRRYTTDVVVESFDFIDSGNGGARGNSGFGSGNDFGGSFGMPDNSFSDSSFNSNDDMTPIDDGDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain

Homologues:

Organism=Escherichia coli, GI1790494, Length=100, Percent_Identity=38, Blast_Score=78, Evalue=3e-16,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): SSB_CLOPE (Q8XH44)

Other databases:

- EMBL:   BA000016
- RefSeq:   NP_563557.1
- ProteinModelPortal:   Q8XH44
- SMR:   Q8XH44
- GeneID:   989297
- GenomeReviews:   BA000016_GR
- KEGG:   cpe:CPE2641
- NMPDR:   fig|195102.1.peg.2704
- HOGENOM:   HBG755544
- OMA:   NQANGER
- ProtClustDB:   CLSK519503
- BioCyc:   CPER195102:CPE2641-MONOMER
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344
- Gene3D:   G3DSA:2.40.50.140
- PANTHER:   PTHR10302
- TIGRFAMs:   TIGR00621

Pfam domain/function: PF00436 SSB; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 16024; Mature: 16024

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKVVLIGRLTKDPELRFAAGSGTAVARFTLAVNRQFKKDEADFISCIAFGKTGETIAQY
CCCEEEEEECCCCCCEEEECCCCCEEEEEEEEECCCCCCCCHHEEEEEEECCCHHHHHHH
ITKGRQLAVSGNIRTGSYEAQDGTRRYTTDVVVESFDFIDSGNGGARGNSGFGSGNDFGG
HHCCCEEEEECCEECCCEECCCCCCEEHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCC
SFGMPDNSFSDSSFNSNDDMTPIDDGDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNKVVLIGRLTKDPELRFAAGSGTAVARFTLAVNRQFKKDEADFISCIAFGKTGETIAQY
CCCEEEEEECCCCCCEEEECCCCCEEEEEEEEECCCCCCCCHHEEEEEEECCCHHHHHHH
ITKGRQLAVSGNIRTGSYEAQDGTRRYTTDVVVESFDFIDSGNGGARGNSGFGSGNDFGG
HHCCCEEEEECCEECCCEECCCCCCEEHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCC
SFGMPDNSFSDSSFNSNDDMTPIDDGDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842