Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311576

Identifier: 18311576

GI number: 18311576

Start: 2972325

End: 2973356

Strand: Reverse

Name: 18311576

Synonym: CPE2594

Alternate gene names: NA

Gene position: 2973356-2972325 (Counterclockwise)

Preceding gene: 18311577

Following gene: 18311575

Centisome position: 98.08

GC content: 30.04

Gene sequence:

>1032_bases
ATGAGCAAATATGCGATACTTGCAAATCCAGGTCATAATCGTATTTATTTTGATACAGCGCTTAAGATTGCAGTTTCAGA
ATTACAAGCAATTGCAGATGCTTATGATATGGAGATAAAGGAGATTGGAGAAGGGAATTTAGGTCTTCCAGCATCAATAT
GCTTTAGTACTAATAGAGAGCTTAAGGAAGAAGACTTTAAAGCATTAAGTTTTTCATCAATTTATTATGCCTTATTTGAA
ATAGTAGAGGGAAATCTTTTAAGACCTATTAGTGTCCCAGATTTTCATACATTCCCTGAAAGTATGGTTCAAATATTAAA
ATATAATGGAAAGACAAATGAGCAATTTACTAGACTTATGGTAAATTTAGCTTTAAGTGCTTGTAAAACAGGAAGTAAAA
AGATAACTTTATTAGATCCTATGTGTGGTAAAGGTACAACTTTATATGAAGGATTCATAAGAGGGTTTGATGTTAAAGGA
ATAGAGATAAATGAGCAATGGACTCAAGAGATTCAAACTTATGTTGTTAGATTTTTAAAAGAAGGAAAGTTTAAGCATAA
AGTTGAAAAATCTAAGGTGTCAGATTCTAAAAAGAAGAAAATAGCTAATGTGTTTAATTTAACTGCAGCAGCAGAAAAGA
ATGCTTTTAATTCAGGAGAGGTTCAATCATTCCAGTTATTTAATTCAGATACTAGAAAAGCAGATCTTCTTATTAAGAAA
AAATCTTGTGATATTATAATATCTGATTTACCTTATGGGGTTCAGCATGGAAGTAAGAATGATAGAAATTCTCTTATGGA
AAGAAGTCCACTAGGGCTTTTAAAAGAAGCAATTCCAGCATGGCATAATGCATTAAAAACTAAAGGAAGTTTAGTACTTT
CATACAATGAATTTACTATGAAATATGATGAGGTAGCTATTGTTTTAGAGGAAAATGGATTTAAAGTTCTTGATGAAACA
CCTTATCATAATTATTTACATAGAGTAGATCAATCAATAAATAGAAATTTAATAGTAGCTGTAAAGGCTTAA

Upstream 100 bases:

>100_bases
AAAAGTATCCTATTTTTTTATTAATATTTAAAGTGTGTGATGTTATAATATTATGGATAAAAAATAGAATTAAAAGATAA
GAATAAGTGAGGATTTTTTT

Downstream 100 bases:

>100_bases
AAATAGAGGATTACTAATTAAGTAATCCTTTATTTTTTACAAATTTAACTTAATTTTTTTATAGTTTTTTTATATTGCTA
ATAGTATAATTTAAGGTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MSKYAILANPGHNRIYFDTALKIAVSELQAIADAYDMEIKEIGEGNLGLPASICFSTNRELKEEDFKALSFSSIYYALFE
IVEGNLLRPISVPDFHTFPESMVQILKYNGKTNEQFTRLMVNLALSACKTGSKKITLLDPMCGKGTTLYEGFIRGFDVKG
IEINEQWTQEIQTYVVRFLKEGKFKHKVEKSKVSDSKKKKIANVFNLTAAAEKNAFNSGEVQSFQLFNSDTRKADLLIKK
KSCDIIISDLPYGVQHGSKNDRNSLMERSPLGLLKEAIPAWHNALKTKGSLVLSYNEFTMKYDEVAIVLEENGFKVLDET
PYHNYLHRVDQSINRNLIVAVKA

Sequences:

>Translated_343_residues
MSKYAILANPGHNRIYFDTALKIAVSELQAIADAYDMEIKEIGEGNLGLPASICFSTNRELKEEDFKALSFSSIYYALFE
IVEGNLLRPISVPDFHTFPESMVQILKYNGKTNEQFTRLMVNLALSACKTGSKKITLLDPMCGKGTTLYEGFIRGFDVKG
IEINEQWTQEIQTYVVRFLKEGKFKHKVEKSKVSDSKKKKIANVFNLTAAAEKNAFNSGEVQSFQLFNSDTRKADLLIKK
KSCDIIISDLPYGVQHGSKNDRNSLMERSPLGLLKEAIPAWHNALKTKGSLVLSYNEFTMKYDEVAIVLEENGFKVLDET
PYHNYLHRVDQSINRNLIVAVKA
>Mature_342_residues
SKYAILANPGHNRIYFDTALKIAVSELQAIADAYDMEIKEIGEGNLGLPASICFSTNRELKEEDFKALSFSSIYYALFEI
VEGNLLRPISVPDFHTFPESMVQILKYNGKTNEQFTRLMVNLALSACKTGSKKITLLDPMCGKGTTLYEGFIRGFDVKGI
EINEQWTQEIQTYVVRFLKEGKFKHKVEKSKVSDSKKKKIANVFNLTAAAEKNAFNSGEVQSFQLFNSDTRKADLLIKKK
SCDIIISDLPYGVQHGSKNDRNSLMERSPLGLLKEAIPAWHNALKTKGSLVLSYNEFTMKYDEVAIVLEENGFKVLDETP
YHNYLHRVDQSINRNLIVAVKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38733; Mature: 38602

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKYAILANPGHNRIYFDTALKIAVSELQAIADAYDMEIKEIGEGNLGLPASICFSTNRE
CCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHEEECCCCH
LKEEDFKALSFSSIYYALFEIVEGNLLRPISVPDFHTFPESMVQILKYNGKTNEQFTRLM
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHH
VNLALSACKTGSKKITLLDPMCGKGTTLYEGFIRGFDVKGIEINEQWTQEIQTYVVRFLK
HHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHH
EGKFKHKVEKSKVSDSKKKKIANVFNLTAAAEKNAFNSGEVQSFQLFNSDTRKADLLIKK
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEEE
KSCDIIISDLPYGVQHGSKNDRNSLMERSPLGLLKEAIPAWHNALKTKGSLVLSYNEFTM
CCCCEEEECCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECHHEE
KYDEVAIVLEENGFKVLDETPYHNYLHRVDQSINRNLIVAVKA
EECEEEEEEECCCCEEECCCCHHHHHHHHHHHCCCCEEEEEEC
>Mature Secondary Structure 
SKYAILANPGHNRIYFDTALKIAVSELQAIADAYDMEIKEIGEGNLGLPASICFSTNRE
CCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHEEECCCCH
LKEEDFKALSFSSIYYALFEIVEGNLLRPISVPDFHTFPESMVQILKYNGKTNEQFTRLM
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHH
VNLALSACKTGSKKITLLDPMCGKGTTLYEGFIRGFDVKGIEINEQWTQEIQTYVVRFLK
HHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHH
EGKFKHKVEKSKVSDSKKKKIANVFNLTAAAEKNAFNSGEVQSFQLFNSDTRKADLLIKK
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEEE
KSCDIIISDLPYGVQHGSKNDRNSLMERSPLGLLKEAIPAWHNALKTKGSLVLSYNEFTM
CCCCEEEECCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECHHEE
KYDEVAIVLEENGFKVLDETPYHNYLHRVDQSINRNLIVAVKA
EECEEEEEEECCCCEEECCCCHHHHHHHHHHHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA