Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311484

Identifier: 18311484

GI number: 18311484

Start: 2866252

End: 2866803

Strand: Reverse

Name: 18311484

Synonym: CPE2502

Alternate gene names: NA

Gene position: 2866803-2866252 (Counterclockwise)

Preceding gene: 18311485

Following gene: 18311483

Centisome position: 94.57

GC content: 24.28

Gene sequence:

>552_bases
ATGTTGGAATTTGTTTTAAACAAAAATGAATTTGTAAAATGTAGAAAAGAGTTTATAAGCAGAGAAATTTTCTTTTGGAC
TTTGTTTGAAATCATAGGGGCTGTATTTGTATTTATAATGACCATGGTTTTTATTAAAGCCAGCAAAGATTTAAACAATA
GTTTTTATTTTGTTACATTATTAGCATGGTTTATTTTTTCTATAGTATGTAATATTAAAAATAAAAAAATAATAGAGCGT
GATATAGAAGAGAAGGTTAGATTCTTAGAAAATAAAAATATGTTTGGTAACTGTAAAGTAGAGATTTTAGGAAATGGAAT
AAGAATTGAATATAATGAAGGAGCAGTAGAGAGAATATATCCTTGGAAAATTATAAGAGAGGTATTTTCTTTTAAGGAGA
ATATATATTTATTTATATCTTCAATTGATTATGTTTCAATTCCAAAAGGAGCTTTCAAAAACAAAGAAGAGCGTATTTCT
TTTTTAAACAAGATAAGTAGTGATAGAAATAATGTTAGAGAACGTATATTATCTATTATTGGATTAGCATAA

Upstream 100 bases:

>100_bases
ATATGTTCATAATAGTTTATTTAAAAAAGCTATGGTAAAATTATTTATATAAATTTTGGGAAAGTGGAGATTAAATGCTT
AAGGGGAGTAGAAAGCGCAT

Downstream 100 bases:

>100_bases
GCTTAACTTTTTAGTTAAGCTTTTTTTCTTATATTGATTTGGTAATCTAGGTTACATATTTTTTTATAAATTAGGTATAT
ATTAAAGATAGATTATTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MLEFVLNKNEFVKCRKEFISREIFFWTLFEIIGAVFVFIMTMVFIKASKDLNNSFYFVTLLAWFIFSIVCNIKNKKIIER
DIEEKVRFLENKNMFGNCKVEILGNGIRIEYNEGAVERIYPWKIIREVFSFKENIYLFISSIDYVSIPKGAFKNKEERIS
FLNKISSDRNNVRERILSIIGLA

Sequences:

>Translated_183_residues
MLEFVLNKNEFVKCRKEFISREIFFWTLFEIIGAVFVFIMTMVFIKASKDLNNSFYFVTLLAWFIFSIVCNIKNKKIIER
DIEEKVRFLENKNMFGNCKVEILGNGIRIEYNEGAVERIYPWKIIREVFSFKENIYLFISSIDYVSIPKGAFKNKEERIS
FLNKISSDRNNVRERILSIIGLA
>Mature_183_residues
MLEFVLNKNEFVKCRKEFISREIFFWTLFEIIGAVFVFIMTMVFIKASKDLNNSFYFVTLLAWFIFSIVCNIKNKKIIER
DIEEKVRFLENKNMFGNCKVEILGNGIRIEYNEGAVERIYPWKIIREVFSFKENIYLFISSIDYVSIPKGAFKNKEERIS
FLNKISSDRNNVRERILSIIGLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21748; Mature: 21748

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEFVLNKNEFVKCRKEFISREIFFWTLFEIIGAVFVFIMTMVFIKASKDLNNSFYFVTL
CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LAWFIFSIVCNIKNKKIIERDIEEKVRFLENKNMFGNCKVEILGNGIRIEYNEGAVERIY
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEECCCCHHHHH
PWKIIREVFSFKENIYLFISSIDYVSIPKGAFKNKEERISFLNKISSDRNNVRERILSII
HHHHHHHHHHHCCCEEEEEECCCEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
GLA
CCC
>Mature Secondary Structure
MLEFVLNKNEFVKCRKEFISREIFFWTLFEIIGAVFVFIMTMVFIKASKDLNNSFYFVTL
CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LAWFIFSIVCNIKNKKIIERDIEEKVRFLENKNMFGNCKVEILGNGIRIEYNEGAVERIY
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEECCCCHHHHH
PWKIIREVFSFKENIYLFISSIDYVSIPKGAFKNKEERISFLNKISSDRNNVRERILSII
HHHHHHHHHHHCCCEEEEEECCCEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
GLA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA