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The map label for this gene is hslR [C]

Identifier: 18311460

GI number: 18311460

Start: 2836445

End: 2836705

Strand: Reverse

Name: hslR [C]

Synonym: CPE2478

Alternate gene names: 18311460

Gene position: 2836705-2836445 (Counterclockwise)

Preceding gene: 18311461

Following gene: 18311459

Centisome position: 93.58

GC content: 27.97

Gene sequence:

>261_bases
ATGAGATTAGATAAATATTTAAAGGTTTCTAGAATAATTAAAAGAAGAACAGTTGCTAAGGAAGCTTGTGAAAGTGGAAG
AGTAATAATAAATGGAAAAGTTGCAAAACCTTCAAATGATATAAAAGAAGGGGATATAATAGAAATATTATTTGGAAACA
GAACTTTAAAAGCAAGGGTTATAAACATTGCTGAGCATGTTAGAAAAGAAAATGCTAAAGAGATGTATGAGATATTAGAA
GGCGAAGAAGATAAAGAATAA

Upstream 100 bases:

>100_bases
TATTTTAAGTTTGGTTAATTTAACTTTAAAAAAGCCCGAGTTATTTCTCGGGCTTTTTTATCTATTAATGAAGTTTCTTT
AAGATTAAGGAGGATATCCT

Downstream 100 bases:

>100_bases
TATGGTTTACTTAAAGCTTTATTATTAAAAATGACTAATATAATTTAAAAGATTATATTAGTCATTTTTTTGTGTAAAGA
TGAATAATCATAAGTTAGGG

Product: S4 domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MRLDKYLKVSRIIKRRTVAKEACESGRVIINGKVAKPSNDIKEGDIIEILFGNRTLKARVINIAEHVRKENAKEMYEILE
GEEDKE

Sequences:

>Translated_86_residues
MRLDKYLKVSRIIKRRTVAKEACESGRVIINGKVAKPSNDIKEGDIIEILFGNRTLKARVINIAEHVRKENAKEMYEILE
GEEDKE
>Mature_86_residues
MRLDKYLKVSRIIKRRTVAKEACESGRVIINGKVAKPSNDIKEGDIIEILFGNRTLKARVINIAEHVRKENAKEMYEILE
GEEDKE

Specific function: Involved In The Recycling Of Free 50s Ribosomal Subunits That Still Carry A Nascent Chain. Binds RNA More Specifically Than DNA. Binds With Very High Affinity To The Free 50s Ribosomal Subunit. Does Not Bind It When It Is Part Of The 70s Ribosome. [C]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 9912; Mature: 9912

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLDKYLKVSRIIKRRTVAKEACESGRVIINGKVAKPSNDIKEGDIIEILFGNRTLKARV
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECEECCCCCCCCCCCEEEEEECCCCHHHHH
INIAEHVRKENAKEMYEILEGEEDKE
HHHHHHHHHCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRLDKYLKVSRIIKRRTVAKEACESGRVIINGKVAKPSNDIKEGDIIEILFGNRTLKARV
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECEECCCCCCCCCCCEEEEEECCCCHHHHH
INIAEHVRKENAKEMYEILEGEEDKE
HHHHHHHHHCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]