Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is cphA [H]

Identifier: 18311428

GI number: 18311428

Start: 2793657

End: 2795318

Strand: Reverse

Name: cphA [H]

Synonym: CPE2446

Alternate gene names: 18311428

Gene position: 2795318-2793657 (Counterclockwise)

Preceding gene: 18311429

Following gene: 18311426

Centisome position: 92.21

GC content: 27.62

Gene sequence:

>1662_bases
TTGAAACTAAAGGATTTAAGAGTTCTAGAGGGGAGAAATATAAAGGGAGAAGAAAATCTTATATTTATAGACATAGAGGA
ATCTGAAAGAAAAAGATTATATTGGTTAATAAGCGATTATGAGTTCATATGCAGAAAGATGAATATGGAAGGTACTCTAA
AAGAGGCTATATATAATGAGTTTGGAGGATGTGCGTGGTTAACTTACTCTAATAAGGAATTAGCTTTATTTATAATTGAA
AGCTTAATAGAGGGAGTAAGTGCAGATAAATTATTAAATGAAGCTGTAGCTAAAAAGCAACGTATTTGGGAGTATAACTT
ATTAGAAGAGTGTTCTAAGAAAAAAATAGACTTCTTTAAAGAGGATGATGAGATAATAGTAGGGTATGGAGTAAATTCTA
AGAGAATAAGTAAAGAGGATTATGAAAATAAAAATTATAATCTGGATTTAATAAATAATGGAGTTATTCCTATAGTATCT
ATAACAGGAACTAATGGTAAAACATCTACTTCAAGATTAATATATAAAGGTTTTGAGAATTTAGGGTATTTCTCTGGATT
GGCTATGACTGGTGGAATAATTATAAATAATGAGTTTGTAAAGAAGGGAGATACTACAGGATTTTATAGTGCTAAAAAGG
TTCTTACAAATCCACAGGTTGAAGTTGAGGTTTTAGAGACTGCTAGAGGTGGTATTTTAAGAAAGGGATTAGGATTTAAA
AATTCTAAGGTTGCCATAATAACATCCTTAGCAGAGGACCACATAGGGGTAGATGGAATAAAAGATATTAATGATTTACT
AGATATAAAACTAATTACAACTAGAGAGGTTTTACCGGAAGGAAAAGTAATAATAAAGGCAGAGCCAAAGCTATATGAAG
TTTTACAGACAAAAGAGAACTTAGTTTTATTTAATTCTAAAAAGAATGAATATATTGAAAAACACATGAAAAATGGTAAG
GAAGCTTGGTTCGTAGAGGATGAAAATGTAATATTTTTTGATGGTAAAGATAAAAATATAATCTCTAATATAAAAGATTT
TAAGTTTACTCATAATGGTAATTCAAAAACTAATATAAATAATATTTTAGTATCTATAGCTGCTATATATGAAGTACATA
AAAATTTAAAGGAAGTAGTGGATTCCTTAAAAAATATAGAGTGTGATGTCTATAACAATATTGGAAGACAAAACATAATT
GAACTTGAAAATTTTAAGATTATATTGGACTATGGTCATAATCCAGAAGCCTTTGAGGAATTATTTTACTTAGCTAATAA
TATCAAAAGAAATAAGATAATTTCTATAGTTTCATCACCAGGGGATAGACTTGATGAATACATAAAAGAATTAGGAAGAA
TAGCAGGTAAAAATTCAGATACTATTATAATAAAAGAAACCTTTGATAGAAGGGGAAGAGAGGAATTAGAAATAACTAAT
TTAATAAAAAGTGGGATAAATGAAATTAAAAATAAATCAGTAGAAGTATTATCAATAATAGATGAAGAAGAAGCTATCAA
AAAGGCAATATCAATGGCCAAAGAAGGAGATATTATAGTAGATTTTACTCAACATTTAGATGTAGTAATACCTGTTATAA
ATAAATACTTATCTCATCATGGAAAAGAAATTATAGAGGTTGATTTAGAAGATTTTCACTAA

Upstream 100 bases:

>100_bases
CAGCTTTAAGCTGCTTTTTTTATTTTAAAGTAAATTTTGAATAAATGTAGGAGAGTGTTGGGAAAATATAATATAAAAAA
TGGTAGGAAGGGTGAGTGAT

Downstream 100 bases:

>100_bases
AGAAAAAGACTATATCAAATTCCTAAGTAATGGAGTTTGCATATAGTCTTTTATATCATATCTTCGGAAGTTAGTTCTAA
TATTTTTATTGTAGTATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Cyanophycin synthase [H]

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MKLKDLRVLEGRNIKGEENLIFIDIEESERKRLYWLISDYEFICRKMNMEGTLKEAIYNEFGGCAWLTYSNKELALFIIE
SLIEGVSADKLLNEAVAKKQRIWEYNLLEECSKKKIDFFKEDDEIIVGYGVNSKRISKEDYENKNYNLDLINNGVIPIVS
ITGTNGKTSTSRLIYKGFENLGYFSGLAMTGGIIINNEFVKKGDTTGFYSAKKVLTNPQVEVEVLETARGGILRKGLGFK
NSKVAIITSLAEDHIGVDGIKDINDLLDIKLITTREVLPEGKVIIKAEPKLYEVLQTKENLVLFNSKKNEYIEKHMKNGK
EAWFVEDENVIFFDGKDKNIISNIKDFKFTHNGNSKTNINNILVSIAAIYEVHKNLKEVVDSLKNIECDVYNNIGRQNII
ELENFKIILDYGHNPEAFEELFYLANNIKRNKIISIVSSPGDRLDEYIKELGRIAGKNSDTIIIKETFDRRGREELEITN
LIKSGINEIKNKSVEVLSIIDEEEAIKKAISMAKEGDIIVDFTQHLDVVIPVINKYLSHHGKEIIEVDLEDFH

Sequences:

>Translated_553_residues
MKLKDLRVLEGRNIKGEENLIFIDIEESERKRLYWLISDYEFICRKMNMEGTLKEAIYNEFGGCAWLTYSNKELALFIIE
SLIEGVSADKLLNEAVAKKQRIWEYNLLEECSKKKIDFFKEDDEIIVGYGVNSKRISKEDYENKNYNLDLINNGVIPIVS
ITGTNGKTSTSRLIYKGFENLGYFSGLAMTGGIIINNEFVKKGDTTGFYSAKKVLTNPQVEVEVLETARGGILRKGLGFK
NSKVAIITSLAEDHIGVDGIKDINDLLDIKLITTREVLPEGKVIIKAEPKLYEVLQTKENLVLFNSKKNEYIEKHMKNGK
EAWFVEDENVIFFDGKDKNIISNIKDFKFTHNGNSKTNINNILVSIAAIYEVHKNLKEVVDSLKNIECDVYNNIGRQNII
ELENFKIILDYGHNPEAFEELFYLANNIKRNKIISIVSSPGDRLDEYIKELGRIAGKNSDTIIIKETFDRRGREELEITN
LIKSGINEIKNKSVEVLSIIDEEEAIKKAISMAKEGDIIVDFTQHLDVVIPVINKYLSHHGKEIIEVDLEDFH
>Mature_553_residues
MKLKDLRVLEGRNIKGEENLIFIDIEESERKRLYWLISDYEFICRKMNMEGTLKEAIYNEFGGCAWLTYSNKELALFIIE
SLIEGVSADKLLNEAVAKKQRIWEYNLLEECSKKKIDFFKEDDEIIVGYGVNSKRISKEDYENKNYNLDLINNGVIPIVS
ITGTNGKTSTSRLIYKGFENLGYFSGLAMTGGIIINNEFVKKGDTTGFYSAKKVLTNPQVEVEVLETARGGILRKGLGFK
NSKVAIITSLAEDHIGVDGIKDINDLLDIKLITTREVLPEGKVIIKAEPKLYEVLQTKENLVLFNSKKNEYIEKHMKNGK
EAWFVEDENVIFFDGKDKNIISNIKDFKFTHNGNSKTNINNILVSIAAIYEVHKNLKEVVDSLKNIECDVYNNIGRQNII
ELENFKIILDYGHNPEAFEELFYLANNIKRNKIISIVSSPGDRLDEYIKELGRIAGKNSDTIIIKETFDRRGREELEITN
LIKSGINEIKNKSVEVLSIIDEEEAIKKAISMAKEGDIIVDFTQHLDVVIPVINKYLSHHGKEIIEVDLEDFH

Specific function: Catalyzes the ATP-dependent polymerization of arginine and aspartate to multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer) [H]

COG id: COG0769

COG function: function code M; UDP-N-acetylmuramyl tripeptide synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR011810
- InterPro:   IPR004101
- InterPro:   IPR013221 [H]

Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; PF08443 RimK [H]

EC number: =6.3.2.29; =6.3.2.30 [H]

Molecular weight: Translated: 63159; Mature: 63159

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKDLRVLEGRNIKGEENLIFIDIEESERKRLYWLISDYEFICRKMNMEGTLKEAIYNE
CCCCCEEEECCCCCCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHH
FGGCAWLTYSNKELALFIIESLIEGVSADKLLNEAVAKKQRIWEYNLLEECSKKKIDFFK
CCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
EDDEIIVGYGVNSKRISKEDYENKNYNLDLINNGVIPIVSITGTNGKTSTSRLIYKGFEN
CCCCEEEEECCCCCCCCHHHCCCCCCEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHH
LGYFSGLAMTGGIIINNEFVKKGDTTGFYSAKKVLTNPQVEVEVLETARGGILRKGLGFK
CCHHHHHHHCCCEEEECHHHCCCCCCCCHHHHHHHCCCCEEEEEEHHHCCCHHHCCCCCC
NSKVAIITSLAEDHIGVDGIKDINDLLDIKLITTREVLPEGKVIIKAEPKLYEVLQTKEN
CCCEEEEEEEHHHCCCCCCHHHHHHHHEEEEEEEHHCCCCCCEEEEECCHHHHHHHCCCC
LVLFNSKKNEYIEKHMKNGKEAWFVEDENVIFFDGKDKNIISNIKDFKFTHNGNSKTNIN
EEEEECCCHHHHHHHHCCCCEEEEEECCCEEEECCCCCHHHHCHHHCEEEECCCCCCHHH
NILVSIAAIYEVHKNLKEVVDSLKNIECDVYNNIGRQNIIELENFKIILDYGHNPEAFEE
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHCCCCCCEEEEECEEEEEECCCCHHHHHH
LFYLANNIKRNKIISIVSSPGDRLDEYIKELGRIAGKNSDTIIIKETFDRRGREELEITN
HHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHH
LIKSGINEIKNKSVEVLSIIDEEEAIKKAISMAKEGDIIVDFTQHLDVVIPVINKYLSHH
HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHC
GKEIIEVDLEDFH
CCEEEEEECCCCC
>Mature Secondary Structure
MKLKDLRVLEGRNIKGEENLIFIDIEESERKRLYWLISDYEFICRKMNMEGTLKEAIYNE
CCCCCEEEECCCCCCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHH
FGGCAWLTYSNKELALFIIESLIEGVSADKLLNEAVAKKQRIWEYNLLEECSKKKIDFFK
CCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
EDDEIIVGYGVNSKRISKEDYENKNYNLDLINNGVIPIVSITGTNGKTSTSRLIYKGFEN
CCCCEEEEECCCCCCCCHHHCCCCCCEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHH
LGYFSGLAMTGGIIINNEFVKKGDTTGFYSAKKVLTNPQVEVEVLETARGGILRKGLGFK
CCHHHHHHHCCCEEEECHHHCCCCCCCCHHHHHHHCCCCEEEEEEHHHCCCHHHCCCCCC
NSKVAIITSLAEDHIGVDGIKDINDLLDIKLITTREVLPEGKVIIKAEPKLYEVLQTKEN
CCCEEEEEEEHHHCCCCCCHHHHHHHHEEEEEEEHHCCCCCCEEEEECCHHHHHHHCCCC
LVLFNSKKNEYIEKHMKNGKEAWFVEDENVIFFDGKDKNIISNIKDFKFTHNGNSKTNIN
EEEEECCCHHHHHHHHCCCCEEEEEECCCEEEECCCCCHHHHCHHHCEEEECCCCCCHHH
NILVSIAAIYEVHKNLKEVVDSLKNIECDVYNNIGRQNIIELENFKIILDYGHNPEAFEE
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHCCCCCCEEEEECEEEEEECCCCHHHHHH
LFYLANNIKRNKIISIVSSPGDRLDEYIKELGRIAGKNSDTIIIKETFDRRGREELEITN
HHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHH
LIKSGINEIKNKSVEVLSIIDEEEAIKKAISMAKEGDIIVDFTQHLDVVIPVINKYLSHH
HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHC
GKEIIEVDLEDFH
CCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9652408 [H]