| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
Click here to switch to the map view.
The map label for this gene is disA
Identifier: 18311414
GI number: 18311414
Start: 2780401
End: 2781465
Strand: Reverse
Name: disA
Synonym: CPE2432
Alternate gene names: 18311414
Gene position: 2781465-2780401 (Counterclockwise)
Preceding gene: 18311415
Following gene: 18311412
Centisome position: 91.75
GC content: 30.23
Gene sequence:
>1065_bases ATGAGAACTGTACATGATGATGAGTTAAAAAAAATATTAAAAATAATGAGTCCAGGTACTTCTTTAAGGGAAGGATTAGA TAATATACTTAGAGCCAAAACAGGAGGACTTATAGTATTAGGGGATAATGAAGAAATATTAGATTTAGTAGATGGTGGAT TTAATATAAATTCTGAATATAGTCCAGCATATATATATGAGCTTGCTAAGATGGATGGAGCATTAGTACTTACTTCAGAT AGAAAAAGAATACTCTACGCAAATGCTCAGCTTATGCCAAATCAATCTATAAGTACTTTTGAAACAGGAACAAGACATAG AACTGCTCAAAGGGTTGCAAAGCAAACAAATAAAATAGCAATAGCTATATCACAAAGAAGAAATATAATTACTGTTTATA AAGGTGACATAAAATATGTTTTAAGGGATAGTGCAGTTATATTAAGTAAAGCAAATCAGGCTATACAAACATTAGAGAAG TATGTAGCTGTACTTGAAAGAGTAACAAATAATCTTAACATACTTGAGTTTCAAGACCTAGCAACTCTTTTTGATGTAAC TACAGCTATACAGAGAACTGAAATGGTAATGAGGATAGTTGAAGAGATAGAGGGCTACATTATTGAGCTAGGAAATGAGG GAAGACTTATTTCTATGCAATTAAATGAATTAGTAAGAAGTATAGAACAAGATGGAGTCCTTTTAATAAGAGATTATTGC TATGACAAGATGGAATATAATGATGTCTACAAAGAAATTCAAGAGTTATCGGCTGAAGATTTATTAGATTTAGATATAAT AGCAAAAGAATTAGGATATGTAGGAAAATCTTTAATTGACACATTAGTGTCACCAAGAGGGTATAGAATATCAAATAAGG TACCAAGAATACCTTCAAATGTAATAGAAAATTTAGTAGGACATTTTGGAAAGCTTAAATATATTCTTGAAGCTGGAAAT GAAGAATTAGATCAAGTAGAGGGAATTGGAGAAGCTAGAGCTAGAGCGATAAAAAATGGATTAAGAAGAATAAGAGAACA AGTTGCTTTAAATAAAAATTTATAA
Upstream 100 bases:
>100_bases AGTTTAGAAAAATTAAAGGGAAGTAAATTAAACCTTATAGGAGTAAAAACTGTAAGGGAAGCAATAGGAAAGATATTTTA AGATGGATAGGTGTGAGTAA
Downstream 100 bases:
>100_bases AAAGAAGTGCCATATAAATATGGCACTTAATATTTATCTAAAAGTAAACTTACCTAAAGTATCCATTTTGTTATATTCTT TTAATAAGATATCAAATAGG
Product: DNA integrity scanning protein DisA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MRTVHDDELKKILKIMSPGTSLREGLDNILRAKTGGLIVLGDNEEILDLVDGGFNINSEYSPAYIYELAKMDGALVLTSD RKRILYANAQLMPNQSISTFETGTRHRTAQRVAKQTNKIAIAISQRRNIITVYKGDIKYVLRDSAVILSKANQAIQTLEK YVAVLERVTNNLNILEFQDLATLFDVTTAIQRTEMVMRIVEEIEGYIIELGNEGRLISMQLNELVRSIEQDGVLLIRDYC YDKMEYNDVYKEIQELSAEDLLDLDIIAKELGYVGKSLIDTLVSPRGYRISNKVPRIPSNVIENLVGHFGKLKYILEAGN EELDQVEGIGEARARAIKNGLRRIREQVALNKNL
Sequences:
>Translated_354_residues MRTVHDDELKKILKIMSPGTSLREGLDNILRAKTGGLIVLGDNEEILDLVDGGFNINSEYSPAYIYELAKMDGALVLTSD RKRILYANAQLMPNQSISTFETGTRHRTAQRVAKQTNKIAIAISQRRNIITVYKGDIKYVLRDSAVILSKANQAIQTLEK YVAVLERVTNNLNILEFQDLATLFDVTTAIQRTEMVMRIVEEIEGYIIELGNEGRLISMQLNELVRSIEQDGVLLIRDYC YDKMEYNDVYKEIQELSAEDLLDLDIIAKELGYVGKSLIDTLVSPRGYRISNKVPRIPSNVIENLVGHFGKLKYILEAGN EELDQVEGIGEARARAIKNGLRRIREQVALNKNL >Mature_354_residues MRTVHDDELKKILKIMSPGTSLREGLDNILRAKTGGLIVLGDNEEILDLVDGGFNINSEYSPAYIYELAKMDGALVLTSD RKRILYANAQLMPNQSISTFETGTRHRTAQRVAKQTNKIAIAISQRRNIITVYKGDIKYVLRDSAVILSKANQAIQTLEK YVAVLERVTNNLNILEFQDLATLFDVTTAIQRTEMVMRIVEEIEGYIIELGNEGRLISMQLNELVRSIEQDGVLLIRDYC YDKMEYNDVYKEIQELSAEDLLDLDIIAKELGYVGKSLIDTLVSPRGYRISNKVPRIPSNVIENLVGHFGKLKYILEAGN EELDQVEGIGEARARAIKNGLRRIREQVALNKNL
Specific function: Participates in a DNA-damage check-point that is active prior to asymmetric division when DNA is damaged. DisA forms globular foci that rapidly scan along the chromosomes during sporulation, searching for lesions. When a lesion is present, disA pauses at
COG id: COG1623
COG function: function code R; Predicted nucleic-acid-binding protein (contains the HHH domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the disA family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DISA_CLOPE (Q8XHQ0)
Other databases:
- EMBL: BA000016 - RefSeq: NP_563348.1 - ProteinModelPortal: Q8XHQ0 - SMR: Q8XHQ0 - GeneID: 990794 - GenomeReviews: BA000016_GR - KEGG: cpe:CPE2432 - NMPDR: fig|195102.1.peg.2495 - HOGENOM: HBG292471 - OMA: ISVSQSM - ProtClustDB: PRK13482 - BioCyc: CPER195102:CPE2432-MONOMER - HAMAP: MF_01438 - InterPro: IPR018906 - InterPro: IPR003390 - InterPro: IPR003583 - InterPro: IPR010994 - SMART: SM00278
Pfam domain/function: PF10635 DisA-linker; PF02457 DisA_N; SSF47781 RuvA_2_like
EC number: NA
Molecular weight: Translated: 40005; Mature: 40005
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTVHDDELKKILKIMSPGTSLREGLDNILRAKTGGLIVLGDNEEILDLVDGGFNINSEY CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCCCCC SPAYIYELAKMDGALVLTSDRKRILYANAQLMPNQSISTFETGTRHRTAQRVAKQTNKIA CHHHHHHHHHCCCEEEEECCCCEEEEECCEECCCCCCCHHHCCHHHHHHHHHHHHCCCEE IAISQRRNIITVYKGDIKYVLRDSAVILSKANQAIQTLEKYVAVLERVTNNLNILEFQDL EEEECCCCEEEEEECCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHH ATLFDVTTAIQRTEMVMRIVEEIEGYIIELGNEGRLISMQLNELVRSIEQDGVLLIRDYC HHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEHHHHHHHHHHHHCCEEEEHHHH YDKMEYNDVYKEIQELSAEDLLDLDIIAKELGYVGKSLIDTLVSPRGYRISNKVPRIPSN CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH VIENLVGHFGKLKYILEAGNEELDQVEGIGEARARAIKNGLRRIREQVALNKNL HHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRTVHDDELKKILKIMSPGTSLREGLDNILRAKTGGLIVLGDNEEILDLVDGGFNINSEY CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCCCCC SPAYIYELAKMDGALVLTSDRKRILYANAQLMPNQSISTFETGTRHRTAQRVAKQTNKIA CHHHHHHHHHCCCEEEEECCCCEEEEECCEECCCCCCCHHHCCHHHHHHHHHHHHCCCEE IAISQRRNIITVYKGDIKYVLRDSAVILSKANQAIQTLEKYVAVLERVTNNLNILEFQDL EEEECCCCEEEEEECCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHH ATLFDVTTAIQRTEMVMRIVEEIEGYIIELGNEGRLISMQLNELVRSIEQDGVLLIRDYC HHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEHHHHHHHHHHHHCCEEEEHHHH YDKMEYNDVYKEIQELSAEDLLDLDIIAKELGYVGKSLIDTLVSPRGYRISNKVPRIPSN CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH VIENLVGHFGKLKYILEAGNEELDQVEGIGEARARAIKNGLRRIREQVALNKNL HHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11792842