| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311334
Identifier: 18311334
GI number: 18311334
Start: 2711502
End: 2712464
Strand: Direct
Name: 18311334
Synonym: CPE2352
Alternate gene names: NA
Gene position: 2711502-2712464 (Clockwise)
Preceding gene: 18311312
Following gene: 18311335
Centisome position: 89.45
GC content: 23.57
Gene sequence:
>963_bases ATGGACTTTAAATATAAAAAATATATTGATAATTCCTTAATATATATAATATTTGCAGTTCTTATATTAATATTTATAAT AGGTTTTTTATTTTTCAGATCACATAATGAAAAATCTAAACTTGAAGACCTAGGAAGAACTATTTCTGAAATTAATCTTA CTTATGATTTTTCTGAAGATAGTATAACATCTGAAGATTATGTTAGTTCTATAGAAAATAAATTAAAGAAACTTCAAGAA ACAAATTCGGCTTTAAAATCTTTAAAAGTTTCTCAAAAGCATCAAAATTTATCCTCTCCACTTAAGGATGGATTAGATAA AAATATAGAATTGTTTAATAAATTACTTTCTATATTGAAAACTCCAGATGCTTTAAATATATCTGATGAATACGCTATTG CTTCAAAATTAAAGAAAGAATGTGAAAATTATTATTCTATATGTAGGTCTAACTTAATACCTGTATATCTATATAAAGAG GGAAATAATTATCTACAGGATATTTTTTATTATATAAATGAGCTAATAAAAACTAATAGAGATAAAGGCTTTGTCCAAAG CCAAAAGAATGATTTTGTTGTTTCTATGAAATCATTACTTCTTAAACTTTCTTCAATGGATGAAAAACTTTTTGAAACAG CTAACCTAATAAAAGAATCAAATAGAGATTTAAAGGTTTTAGTTACAGATATAGAAAATAAACTTTCTTCTCTTCAAGAG TTAAAAAATAATTTATATTCCTTACCTATTCCCGAACAAGCTAATGATTCTTTCTTAGCTCTTGAAAATGCATTAAAATC CTATGATAAGTATATTAACTATTTCTATAAAGGCCTTTTAGATGAAATTGAAAATAAAAAGACACCAGAAGATTATTATG ATAAATCTTCGACTTTATTTGATGAGTTTATCTATTCCTTAGAGTCTGCTGAAAAGTCTTTAGATAACTATAATAAAAAT TAA
Upstream 100 bases:
>100_bases CATTTTAAATGATTTCTTTTCAGTTTTACATATTCTAGGTAATGTTATTATACATTCTCTCATATATTTTAATAGAAAAT TATATAAGGGGGTACTTGCT
Downstream 100 bases:
>100_bases ATAGGAGTATTAATTCTATTTTTTTGGTTACAATATACAAAGTAAAATAATTACCTAAAAGGAGGTTCTTATGAAAAAAA GTATTTATAATTACTTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MDFKYKKYIDNSLIYIIFAVLILIFIIGFLFFRSHNEKSKLEDLGRTISEINLTYDFSEDSITSEDYVSSIENKLKKLQE TNSALKSLKVSQKHQNLSSPLKDGLDKNIELFNKLLSILKTPDALNISDEYAIASKLKKECENYYSICRSNLIPVYLYKE GNNYLQDIFYYINELIKTNRDKGFVQSQKNDFVVSMKSLLLKLSSMDEKLFETANLIKESNRDLKVLVTDIENKLSSLQE LKNNLYSLPIPEQANDSFLALENALKSYDKYINYFYKGLLDEIENKKTPEDYYDKSSTLFDEFIYSLESAEKSLDNYNKN
Sequences:
>Translated_320_residues MDFKYKKYIDNSLIYIIFAVLILIFIIGFLFFRSHNEKSKLEDLGRTISEINLTYDFSEDSITSEDYVSSIENKLKKLQE TNSALKSLKVSQKHQNLSSPLKDGLDKNIELFNKLLSILKTPDALNISDEYAIASKLKKECENYYSICRSNLIPVYLYKE GNNYLQDIFYYINELIKTNRDKGFVQSQKNDFVVSMKSLLLKLSSMDEKLFETANLIKESNRDLKVLVTDIENKLSSLQE LKNNLYSLPIPEQANDSFLALENALKSYDKYINYFYKGLLDEIENKKTPEDYYDKSSTLFDEFIYSLESAEKSLDNYNKN >Mature_320_residues MDFKYKKYIDNSLIYIIFAVLILIFIIGFLFFRSHNEKSKLEDLGRTISEINLTYDFSEDSITSEDYVSSIENKLKKLQE TNSALKSLKVSQKHQNLSSPLKDGLDKNIELFNKLLSILKTPDALNISDEYAIASKLKKECENYYSICRSNLIPVYLYKE GNNYLQDIFYYINELIKTNRDKGFVQSQKNDFVVSMKSLLLKLSSMDEKLFETANLIKESNRDLKVLVTDIENKLSSLQE LKNNLYSLPIPEQANDSFLALENALKSYDKYINYFYKGLLDEIENKKTPEDYYDKSSTLFDEFIYSLESAEKSLDNYNKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37319; Mature: 37319
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFKYKKYIDNSLIYIIFAVLILIFIIGFLFFRSHNEKSKLEDLGRTISEINLTYDFSED CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCEEEECCCC SITSEDYVSSIENKLKKLQETNSALKSLKVSQKHQNLSSPLKDGLDKNIELFNKLLSILK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC TPDALNISDEYAIASKLKKECENYYSICRSNLIPVYLYKEGNNYLQDIFYYINELIKTNR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCC DKGFVQSQKNDFVVSMKSLLLKLSSMDEKLFETANLIKESNRDLKVLVTDIENKLSSLQE CCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH LKNNLYSLPIPEQANDSFLALENALKSYDKYINYFYKGLLDEIENKKTPEDYYDKSSTLF HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHH DEFIYSLESAEKSLDNYNKN HHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDFKYKKYIDNSLIYIIFAVLILIFIIGFLFFRSHNEKSKLEDLGRTISEINLTYDFSED CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCEEEECCCC SITSEDYVSSIENKLKKLQETNSALKSLKVSQKHQNLSSPLKDGLDKNIELFNKLLSILK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC TPDALNISDEYAIASKLKKECENYYSICRSNLIPVYLYKEGNNYLQDIFYYINELIKTNR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCC DKGFVQSQKNDFVVSMKSLLLKLSSMDEKLFETANLIKESNRDLKVLVTDIENKLSSLQE CCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH LKNNLYSLPIPEQANDSFLALENALKSYDKYINYFYKGLLDEIENKKTPEDYYDKSSTLF HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHH DEFIYSLESAEKSLDNYNKN HHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA