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The map label for this gene is atpB

Identifier: 18311169

GI number: 18311169

Start: 2508271

End: 2509668

Strand: Reverse

Name: atpB

Synonym: CPE2187

Alternate gene names: 18311169

Gene position: 2509668-2508271 (Counterclockwise)

Preceding gene: 18311170

Following gene: 18311168

Centisome position: 82.79

GC content: 36.55

Gene sequence:

>1398_bases
ATGTCTAATAATATAGGTAAAGTAGTTCAGGTTATTGGACCAGTTGTAGATATAAAATTTGCAAATGATGAACTTCCTAA
TATATTTAATGCAATACACATAAAAATGGACGATGGAAAAATCTTAGTTTGTGAGGTAGAGCAACACGTAGGAGACGATA
TAGTTAGAACTATAGCTATGGAAGCTACTGAAGGACTAAGAAGAGGTGTAGAAGCTGTTGATACAGGAGCACCTATATCA
GTACCAGTTGGTGAATGCGTATTAGGAAGAATATTTAACGTATTAGGTAAACCACTAGATAGTGGAGCTGAAGTTAATAA
CGAAGAAAAATATCCAATTCATAGACCAGCTCCATCATTTGAAGAACAATCAGTTGTTCCTCAAATGTTTGAGACAGGAA
TAAAGGTTATCGACCTTTTAGCACCTTACCAAAGAGGGGGAAAAATCGGTCTATTTGGAGGTGCAGGTGTTGGTAAAACA
GTTCTTATCCAAGAGCTTATAAACAACATAGCTAAAGAGCACGGTGGACTTTCTGTATTCACAGGAGTTGGAGAAAGATC
AAGAGAAGGTAATGACCTTTACTATGAAATGATGGAATCAGGAGTTATAAAAAATACAGCATTAGTATTTGGACAAATGA
ACGAACCACCTGGAGCAAGAATGAGAGTTGCTTTAACAGGACTTACTATGGCTGAGTACTTCAGAGACCAAGGTCAAGAC
GTGTTATTATTCATAGATAACATATTCAGATTCTCACAAGCTGGATCAGAGGTTTCAGCTTTATTAGGAAGAATACCATC
AGCTGTTGGTTACCAACCAACTCTTGCTACAGAGATGGGAGCTCTTCAAGAGAGAATCACATCAACTACCCATGGATCAA
TTACATCAGTTCAAGCGGTATACGTACCAGCCGATGACTTAACTGACCCAGCTCCAGCTACAACATTCAACCACCTTGAT
GCTAAAACAGTTTTATCAAGAAGTATAGCTGAAATAGGTATTTACCCAGCTGTTGATCCTCTAGATTCTTCATCAAGAAT
ATTAGACCCAAGAGTTGTTGGAGAAGAACACTATGAAGTTGCTTCAAAAGTTAAGCATATATTAGAAAGATATAAAGAAC
TTCAAGATATCATAGCTATCCTTGGTGTTGATGAGCTTGCAGATGAAGATAAATTAATAGTTGCTAGAGCAAGAAGAATA
CAAAAATTCTTATCACAACCATTCACAGTAGCAGAGCAATTTACTGGAATGCAAGGTAGATATGTTCCAATAAAAGAAAC
TATAAGAGGTTTCAAAGAAATATTAGAAGGTAAACATGACAATGTTCCTGAATCAGCTTTCTTATTTGCTGGAACAATAG
AAGAAGTACTAGAAAAAGCTAGAGCAATGGCCCAATAA

Upstream 100 bases:

>100_bases
TTAGATGCTAAGTACAATAGAATAAGACAAAGTATCATAACACAAGAGATATCAGAAATCGTTGGTGGAGCAGAAGCACA
AAAATAAGGAGGTACTCAAA

Downstream 100 bases:

>100_bases
AAGGGGTGAATAAAAATGAATAAATTTAAGTTAATTGTTACAACACCAGAAAGAGTTCTTATTTCAGGTGAAGTTTCAAG
AGTCTTATGTAAAAATGCTG

Product: F0F1 ATP synthase subunit beta

Products: NA

Alternate protein names: ATP synthase F1 sector subunit beta; F-ATPase subunit beta

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MSNNIGKVVQVIGPVVDIKFANDELPNIFNAIHIKMDDGKILVCEVEQHVGDDIVRTIAMEATEGLRRGVEAVDTGAPIS
VPVGECVLGRIFNVLGKPLDSGAEVNNEEKYPIHRPAPSFEEQSVVPQMFETGIKVIDLLAPYQRGGKIGLFGGAGVGKT
VLIQELINNIAKEHGGLSVFTGVGERSREGNDLYYEMMESGVIKNTALVFGQMNEPPGARMRVALTGLTMAEYFRDQGQD
VLLFIDNIFRFSQAGSEVSALLGRIPSAVGYQPTLATEMGALQERITSTTHGSITSVQAVYVPADDLTDPAPATTFNHLD
AKTVLSRSIAEIGIYPAVDPLDSSSRILDPRVVGEEHYEVASKVKHILERYKELQDIIAILGVDELADEDKLIVARARRI
QKFLSQPFTVAEQFTGMQGRYVPIKETIRGFKEILEGKHDNVPESAFLFAGTIEEVLEKARAMAQ

Sequences:

>Translated_465_residues
MSNNIGKVVQVIGPVVDIKFANDELPNIFNAIHIKMDDGKILVCEVEQHVGDDIVRTIAMEATEGLRRGVEAVDTGAPIS
VPVGECVLGRIFNVLGKPLDSGAEVNNEEKYPIHRPAPSFEEQSVVPQMFETGIKVIDLLAPYQRGGKIGLFGGAGVGKT
VLIQELINNIAKEHGGLSVFTGVGERSREGNDLYYEMMESGVIKNTALVFGQMNEPPGARMRVALTGLTMAEYFRDQGQD
VLLFIDNIFRFSQAGSEVSALLGRIPSAVGYQPTLATEMGALQERITSTTHGSITSVQAVYVPADDLTDPAPATTFNHLD
AKTVLSRSIAEIGIYPAVDPLDSSSRILDPRVVGEEHYEVASKVKHILERYKELQDIIAILGVDELADEDKLIVARARRI
QKFLSQPFTVAEQFTGMQGRYVPIKETIRGFKEILEGKHDNVPESAFLFAGTIEEVLEKARAMAQ
>Mature_464_residues
SNNIGKVVQVIGPVVDIKFANDELPNIFNAIHIKMDDGKILVCEVEQHVGDDIVRTIAMEATEGLRRGVEAVDTGAPISV
PVGECVLGRIFNVLGKPLDSGAEVNNEEKYPIHRPAPSFEEQSVVPQMFETGIKVIDLLAPYQRGGKIGLFGGAGVGKTV
LIQELINNIAKEHGGLSVFTGVGERSREGNDLYYEMMESGVIKNTALVFGQMNEPPGARMRVALTGLTMAEYFRDQGQDV
LLFIDNIFRFSQAGSEVSALLGRIPSAVGYQPTLATEMGALQERITSTTHGSITSVQAVYVPADDLTDPAPATTFNHLDA
KTVLSRSIAEIGIYPAVDPLDSSSRILDPRVVGEEHYEVASKVKHILERYKELQDIIAILGVDELADEDKLIVARARRIQ
KFLSQPFTVAEQFTGMQGRYVPIKETIRGFKEILEGKHDNVPESAFLFAGTIEEVLEKARAMAQ

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits

COG id: COG0055

COG function: function code C; F0F1-type ATP synthase, beta subunit

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family

Homologues:

Organism=Homo sapiens, GI32189394, Length=467, Percent_Identity=67.8800856531049, Blast_Score=639, Evalue=0.0,
Organism=Homo sapiens, GI19913424, Length=310, Percent_Identity=29.3548387096774, Blast_Score=122, Evalue=7e-28,
Organism=Homo sapiens, GI19913426, Length=424, Percent_Identity=26.4150943396226, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI19913428, Length=422, Percent_Identity=26.0663507109005, Blast_Score=115, Evalue=7e-26,
Organism=Homo sapiens, GI50345984, Length=389, Percent_Identity=25.9640102827763, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI4757810, Length=389, Percent_Identity=25.9640102827763, Blast_Score=107, Evalue=3e-23,
Organism=Escherichia coli, GI1790170, Length=458, Percent_Identity=66.1572052401747, Blast_Score=630, Evalue=0.0,
Organism=Escherichia coli, GI1788251, Length=365, Percent_Identity=29.3150684931507, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1790172, Length=385, Percent_Identity=25.7142857142857, Blast_Score=120, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI25144756, Length=471, Percent_Identity=66.0297239915074, Blast_Score=621, Evalue=1e-178,
Organism=Caenorhabditis elegans, GI17565854, Length=350, Percent_Identity=29.1428571428571, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17510931, Length=424, Percent_Identity=26.1792452830189, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17570191, Length=426, Percent_Identity=26.2910798122066, Blast_Score=118, Evalue=8e-27,
Organism=Caenorhabditis elegans, GI71988080, Length=395, Percent_Identity=25.3164556962025, Blast_Score=105, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI71988063, Length=395, Percent_Identity=25.3164556962025, Blast_Score=105, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI71988074, Length=367, Percent_Identity=24.2506811989101, Blast_Score=85, Evalue=7e-17,
Organism=Saccharomyces cerevisiae, GI6322581, Length=458, Percent_Identity=70.5240174672489, Blast_Score=650, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6319603, Length=425, Percent_Identity=26.5882352941176, Blast_Score=122, Evalue=9e-29,
Organism=Saccharomyces cerevisiae, GI6319370, Length=367, Percent_Identity=26.158038147139, Blast_Score=101, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6320016, Length=233, Percent_Identity=28.755364806867, Blast_Score=94, Evalue=6e-20,
Organism=Drosophila melanogaster, GI24638766, Length=467, Percent_Identity=67.6659528907923, Blast_Score=632, Evalue=0.0,
Organism=Drosophila melanogaster, GI28574560, Length=466, Percent_Identity=66.9527896995708, Blast_Score=615, Evalue=1e-176,
Organism=Drosophila melanogaster, GI24583992, Length=349, Percent_Identity=27.5071633237822, Blast_Score=129, Evalue=4e-30,
Organism=Drosophila melanogaster, GI24583988, Length=349, Percent_Identity=26.9340974212034, Blast_Score=129, Evalue=4e-30,
Organism=Drosophila melanogaster, GI24583986, Length=349, Percent_Identity=26.9340974212034, Blast_Score=129, Evalue=4e-30,
Organism=Drosophila melanogaster, GI24583984, Length=349, Percent_Identity=26.9340974212034, Blast_Score=129, Evalue=4e-30,
Organism=Drosophila melanogaster, GI20129479, Length=347, Percent_Identity=27.9538904899135, Blast_Score=126, Evalue=3e-29,
Organism=Drosophila melanogaster, GI281361666, Length=426, Percent_Identity=26.2910798122066, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24646341, Length=426, Percent_Identity=26.2910798122066, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI17136796, Length=426, Percent_Identity=26.2910798122066, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24658560, Length=396, Percent_Identity=26.010101010101, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24638768, Length=92, Percent_Identity=55.4347826086957, Blast_Score=96, Evalue=5e-20,

Paralogues:

None

Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): ATPB_CLOP1 (Q0TNC4)

Other databases:

- EMBL:   CP000246
- RefSeq:   YP_696866.1
- ProteinModelPortal:   Q0TNC4
- SMR:   Q0TNC4
- STRING:   Q0TNC4
- GeneID:   4201603
- GenomeReviews:   CP000246_GR
- KEGG:   cpf:CPF_2452
- TIGR:   CPF_2452
- eggNOG:   COG0055
- HOGENOM:   HBG565875
- OMA:   IGQEHYD
- ProtClustDB:   PRK09280
- BioCyc:   CPER195103:CPF_2452-MONOMER
- HAMAP:   MF_01347
- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005722
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100
- PANTHER:   PTHR15184:SF8
- SMART:   SM00382
- TIGRFAMs:   TIGR01039

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N; SSF47917 ATPase_a/b_C; SSF50615 ATPase_a/b_N

EC number: =3.6.3.14

Molecular weight: Translated: 50762; Mature: 50631

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNNIGKVVQVIGPVVDIKFANDELPNIFNAIHIKMDDGKILVCEVEQHVGDDIVRTIAM
CCCCHHHHHHHHCCCEEEEECCCCCCHHHCEEEEEECCCEEEEEECHHHCCHHHHHHHHH
EATEGLRRGVEAVDTGAPISVPVGECVLGRIFNVLGKPLDSGAEVNNEEKYPIHRPAPSF
HHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
EEQSVVPQMFETGIKVIDLLAPYQRGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVF
CHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEE
TGVGERSREGNDLYYEMMESGVIKNTALVFGQMNEPPGARMRVALTGLTMAEYFRDQGQD
ECCCCCCCCCCHHHHHHHHCCCCCCHHEEEECCCCCCCCEEEEEEHHHHHHHHHHHCCCE
VLLFIDNIFRFSQAGSEVSALLGRIPSAVGYQPTLATEMGALQERITSTTHGSITSVQAV
EEEEHHHHHHHHHCCHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEE
YVPADDLTDPAPATTFNHLDAKTVLSRSIAEIGIYPAVDPLDSSSRILDPRVVGEEHYEV
EECCCCCCCCCCCCHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHH
ASKVKHILERYKELQDIIAILGVDELADEDKLIVARARRIQKFLSQPFTVAEQFTGMQGR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
YVPIKETIRGFKEILEGKHDNVPESAFLFAGTIEEVLEKARAMAQ
EECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNNIGKVVQVIGPVVDIKFANDELPNIFNAIHIKMDDGKILVCEVEQHVGDDIVRTIAM
CCCHHHHHHHHCCCEEEEECCCCCCHHHCEEEEEECCCEEEEEECHHHCCHHHHHHHHH
EATEGLRRGVEAVDTGAPISVPVGECVLGRIFNVLGKPLDSGAEVNNEEKYPIHRPAPSF
HHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
EEQSVVPQMFETGIKVIDLLAPYQRGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVF
CHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEE
TGVGERSREGNDLYYEMMESGVIKNTALVFGQMNEPPGARMRVALTGLTMAEYFRDQGQD
ECCCCCCCCCCHHHHHHHHCCCCCCHHEEEECCCCCCCCEEEEEEHHHHHHHHHHHCCCE
VLLFIDNIFRFSQAGSEVSALLGRIPSAVGYQPTLATEMGALQERITSTTHGSITSVQAV
EEEEHHHHHHHHHCCHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEE
YVPADDLTDPAPATTFNHLDAKTVLSRSIAEIGIYPAVDPLDSSSRILDPRVVGEEHYEV
EECCCCCCCCCCCCHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHH
ASKVKHILERYKELQDIIAILGVDELADEDKLIVARARRIQKFLSQPFTVAEQFTGMQGR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
YVPIKETIRGFKEILEGKHDNVPESAFLFAGTIEEVLEKARAMAQ
EECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA