| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311137
Identifier: 18311137
GI number: 18311137
Start: 2466626
End: 2468380
Strand: Reverse
Name: 18311137
Synonym: CPE2155
Alternate gene names: NA
Gene position: 2468380-2466626 (Counterclockwise)
Preceding gene: 18311138
Following gene: 18311136
Centisome position: 81.43
GC content: 27.75
Gene sequence:
>1755_bases ATGTATATTTTGTTTACAGAAAAGGTAAAAGCAAAAGAATATTACATAAAGGATTTATTAAGTAATAAGTTCTTATTTGA AATCCCAGATTATCAAAGAGCATATTCTTGGACTAAAGAAAATTTAAAACAATTAGTTGAGGATATTTGGGAGTCAGTAG AACTAAATAAAGCAAGAGGAAATAAAGAATTTGATCAATATGAGCCATATTTCTTAGGAAGTATTGTTTTATGTTCTAAG GAATATAAGGATGATGGCTGTGGAATATATGATGTAATAGATGGACAACAAAGACTTACATCTATAATCATGTTAATTGC TGCAATAAGAGATTTAATAGATAATGAAGAGTATAAAAAAGTATTATCTGATTTAATATATCAAAAACCAAATGTTCTTA TGGGAATTAAAGAGAGCATAAGAGTTAAGGCTAGAGGAAAAGAAGAAGAGTTCTTTAAAAAGTACATATTAACTAATGGT GGAACAGAATTAGTTAAAGATTTAGATATGGAAGAACTTTCAGAAGCTAAACAAAATATGGTTAATGCAATAGAAGTATT TAGAGATAGTTTCTTTAATGAAAATGGAGAACTTTTAGAAGAAAAGTTAAATGAGTTTATAGTTTACTTACTTCAAAAAG TTGTACTAGTTGTAATAACAACAGAATCATTTACTTCAGCATTTAGATTATTCAATGTAATAAATGCAAGAGGATTACCT TTAACAGATTCAGATCTTTTAAAGAGTGAAAACTTAAGAGTTATGAACCCTGAAATAAGAAAAGAGTACACTGATATTTG GGAAAGTCATGAACAAGATTTAGGTAAGGAAAAACTAGATCAAATCATAGGTTTCATGAGAACAATGAAGCTTAAAAATA AAGTTGAAGAAAGCGTATATGAAGAGTTTAGCAAAAAGATATTTAGAAATGAACCAGAATATCTAGGAGTTAACTTTGTA AATCATTTAACTGCTGTAAAAGCTTTATATGACAAGTATATAATAGACGGTAATCTTGAAGGGGTATCAGAGGAAGAAAA ATCTTATTATAAAAATTTAATAAACATAATGAGAGAATTCTTACCATATGATGATTGGATGGCAACAGTTATTAGATTTG CTGAGAAATTCAATGATGATAAGTTAGTTTTAGAATTTGTTAAAGTTTTAGAAAAAAGACTTGTTATTGATTGGGTAAAC GGAAATTCATTTGCTGATAGATTAAATAGAGTTTATGGAATTTTAGAAGCTATAGAAGAAAAAGATTCTTTAGAAGAAAT AAAAGAAGCACCAGTATTCTTATATGACTTAGAGAGAACAACTGCATACTTTGAAAATGCTTTAAATGATATAGATTTCT ATAGCAAAGGTAGAATGATGATACCTAAGTATATCTTCGTAAGACTTGATATGGAAAAGAGAGCTAATGAAGTTTTAGAT TATAGCGATAAGATTATGATAGAGCATGTTCTTCCTAGAAATGCTAAAGAAGCTTATTGGAAAGATAACTTCTCAGCTGA TCAAAGAAGAAACTGGGCTAATAAGTTTGGTAACTTAGTTATAATAACAGGAGCTAAAAATACTAGAGCTAACAATAAAC CATTTGCTGAAAAAGTTGAACAATACTTAAGTAAGAAAAGTGATTTCGCTATAACTAAAGAAGTTTTAGAATTATCTGAT TGGAATATGGATTCATTAAAAGATAGACATGAAAGCTTAGTTAATAGAGCATTAGAACTTTGGACTAAGTTTTAG
Upstream 100 bases:
>100_bases CAAATGATGTATTTAGTGAAAAAGCCTTAAATGGCTTTTTTTCATGAGTAGAGTTATTAGTAAAAGAGGACTTAGAATAA ATAGTAAAAAATTAGGAGGC
Downstream 100 bases:
>100_bases AAATTAAAAGGGCATGTATCAAAATAACTTTTATTTTTATATTTTGATACAGCCCCCTTTTTTATTTAAATAAAAGTTAA GTTTTGTCTATTGAAAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 584; Mature: 584
Protein sequence:
>584_residues MYILFTEKVKAKEYYIKDLLSNKFLFEIPDYQRAYSWTKENLKQLVEDIWESVELNKARGNKEFDQYEPYFLGSIVLCSK EYKDDGCGIYDVIDGQQRLTSIIMLIAAIRDLIDNEEYKKVLSDLIYQKPNVLMGIKESIRVKARGKEEEFFKKYILTNG GTELVKDLDMEELSEAKQNMVNAIEVFRDSFFNENGELLEEKLNEFIVYLLQKVVLVVITTESFTSAFRLFNVINARGLP LTDSDLLKSENLRVMNPEIRKEYTDIWESHEQDLGKEKLDQIIGFMRTMKLKNKVEESVYEEFSKKIFRNEPEYLGVNFV NHLTAVKALYDKYIIDGNLEGVSEEEKSYYKNLINIMREFLPYDDWMATVIRFAEKFNDDKLVLEFVKVLEKRLVIDWVN GNSFADRLNRVYGILEAIEEKDSLEEIKEAPVFLYDLERTTAYFENALNDIDFYSKGRMMIPKYIFVRLDMEKRANEVLD YSDKIMIEHVLPRNAKEAYWKDNFSADQRRNWANKFGNLVIITGAKNTRANNKPFAEKVEQYLSKKSDFAITKEVLELSD WNMDSLKDRHESLVNRALELWTKF
Sequences:
>Translated_584_residues MYILFTEKVKAKEYYIKDLLSNKFLFEIPDYQRAYSWTKENLKQLVEDIWESVELNKARGNKEFDQYEPYFLGSIVLCSK EYKDDGCGIYDVIDGQQRLTSIIMLIAAIRDLIDNEEYKKVLSDLIYQKPNVLMGIKESIRVKARGKEEEFFKKYILTNG GTELVKDLDMEELSEAKQNMVNAIEVFRDSFFNENGELLEEKLNEFIVYLLQKVVLVVITTESFTSAFRLFNVINARGLP LTDSDLLKSENLRVMNPEIRKEYTDIWESHEQDLGKEKLDQIIGFMRTMKLKNKVEESVYEEFSKKIFRNEPEYLGVNFV NHLTAVKALYDKYIIDGNLEGVSEEEKSYYKNLINIMREFLPYDDWMATVIRFAEKFNDDKLVLEFVKVLEKRLVIDWVN GNSFADRLNRVYGILEAIEEKDSLEEIKEAPVFLYDLERTTAYFENALNDIDFYSKGRMMIPKYIFVRLDMEKRANEVLD YSDKIMIEHVLPRNAKEAYWKDNFSADQRRNWANKFGNLVIITGAKNTRANNKPFAEKVEQYLSKKSDFAITKEVLELSD WNMDSLKDRHESLVNRALELWTKF >Mature_584_residues MYILFTEKVKAKEYYIKDLLSNKFLFEIPDYQRAYSWTKENLKQLVEDIWESVELNKARGNKEFDQYEPYFLGSIVLCSK EYKDDGCGIYDVIDGQQRLTSIIMLIAAIRDLIDNEEYKKVLSDLIYQKPNVLMGIKESIRVKARGKEEEFFKKYILTNG GTELVKDLDMEELSEAKQNMVNAIEVFRDSFFNENGELLEEKLNEFIVYLLQKVVLVVITTESFTSAFRLFNVINARGLP LTDSDLLKSENLRVMNPEIRKEYTDIWESHEQDLGKEKLDQIIGFMRTMKLKNKVEESVYEEFSKKIFRNEPEYLGVNFV NHLTAVKALYDKYIIDGNLEGVSEEEKSYYKNLINIMREFLPYDDWMATVIRFAEKFNDDKLVLEFVKVLEKRLVIDWVN GNSFADRLNRVYGILEAIEEKDSLEEIKEAPVFLYDLERTTAYFENALNDIDFYSKGRMMIPKYIFVRLDMEKRANEVLD YSDKIMIEHVLPRNAKEAYWKDNFSADQRRNWANKFGNLVIITGAKNTRANNKPFAEKVEQYLSKKSDFAITKEVLELSD WNMDSLKDRHESLVNRALELWTKF
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68932; Mature: 68932
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYILFTEKVKAKEYYIKDLLSNKFLFEIPDYQRAYSWTKENLKQLVEDIWESVELNKARG CEEEEECHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NKEFDQYEPYFLGSIVLCSKEYKDDGCGIYDVIDGQQRLTSIIMLIAAIRDLIDNEEYKK CCCCHHCCCHHHHHHHEECHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHH VLSDLIYQKPNVLMGIKESIRVKARGKEEEFFKKYILTNGGTELVKDLDMEELSEAKQNM HHHHHHHCCCCCEECCHHHHEECCCCCHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHH VNAIEVFRDSFFNENGELLEEKLNEFIVYLLQKVVLVVITTESFTSAFRLFNVINARGLP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC LTDSDLLKSENLRVMNPEIRKEYTDIWESHEQDLGKEKLDQIIGFMRTMKLKNKVEESVY CCCHHHHHCCCCEEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH EEFSKKIFRNEPEYLGVNFVNHLTAVKALYDKYIIDGNLEGVSEEEKSYYKNLINIMREF HHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH LPYDDWMATVIRFAEKFNDDKLVLEFVKVLEKRLVIDWVNGNSFADRLNRVYGILEAIEE CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHH KDSLEEIKEAPVFLYDLERTTAYFENALNDIDFYSKGRMMIPKYIFVRLDMEKRANEVLD HHHHHHHHHCCEEEEEHHHHHHHHHHHHHHCCHHCCCCEECCEEEEEEECHHHHHHHHHC YSDKIMIEHVLPRNAKEAYWKDNFSADQRRNWANKFGNLVIITGAKNTRANNKPFAEKVE CCCHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHH QYLSKKSDFAITKEVLELSDWNMDSLKDRHESLVNRALELWTKF HHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYILFTEKVKAKEYYIKDLLSNKFLFEIPDYQRAYSWTKENLKQLVEDIWESVELNKARG CEEEEECHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NKEFDQYEPYFLGSIVLCSKEYKDDGCGIYDVIDGQQRLTSIIMLIAAIRDLIDNEEYKK CCCCHHCCCHHHHHHHEECHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHH VLSDLIYQKPNVLMGIKESIRVKARGKEEEFFKKYILTNGGTELVKDLDMEELSEAKQNM HHHHHHHCCCCCEECCHHHHEECCCCCHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHH VNAIEVFRDSFFNENGELLEEKLNEFIVYLLQKVVLVVITTESFTSAFRLFNVINARGLP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC LTDSDLLKSENLRVMNPEIRKEYTDIWESHEQDLGKEKLDQIIGFMRTMKLKNKVEESVY CCCHHHHHCCCCEEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH EEFSKKIFRNEPEYLGVNFVNHLTAVKALYDKYIIDGNLEGVSEEEKSYYKNLINIMREF HHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH LPYDDWMATVIRFAEKFNDDKLVLEFVKVLEKRLVIDWVNGNSFADRLNRVYGILEAIEE CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHH KDSLEEIKEAPVFLYDLERTTAYFENALNDIDFYSKGRMMIPKYIFVRLDMEKRANEVLD HHHHHHHHHCCEEEEEHHHHHHHHHHHHHHCCHHCCCCEECCEEEEEEECHHHHHHHHHC YSDKIMIEHVLPRNAKEAYWKDNFSADQRRNWANKFGNLVIITGAKNTRANNKPFAEKVE CCCHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHH QYLSKKSDFAITKEVLELSDWNMDSLKDRHESLVNRALELWTKF HHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA