Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311073

Identifier: 18311073

GI number: 18311073

Start: 2399789

End: 2400094

Strand: Direct

Name: 18311073

Synonym: CPE2091

Alternate gene names: NA

Gene position: 2399789-2400094 (Clockwise)

Preceding gene: 18311072

Following gene: 18311076

Centisome position: 79.16

GC content: 26.8

Gene sequence:

>306_bases
ATGCAAGAAAAAGTTTTAAGAAAATTATTTTTAGGTTTTATACATATCCATATCTTACACCATGCAAAAGTTGAACCTTT
TTTCGGATCAAAAATGATTGAAGAACTTAGGGAACATGGATATTCTATGAGTCCCGGAACTTTATACCCAATACTTCATA
ATATGGAGAGAGATGGTTTACTACTAAGAAAAGATAGATTAATAGATGGTAAGATAAGAAAATATTATAGTATTACATCA
GAAGGTAATGAGATATTAGAAGAAGCTAAAAGTAAAGCATTTGAATTATTTAAAGAAATAAAATAA

Upstream 100 bases:

>100_bases
TGAAAGAATTAAGGAGTATAATATAATAGAAAGCATTAACAGTAATCTATTTTCGATATCGTATTTATATATATATTTAT
TTGTTATAGGAGATGACCCC

Downstream 100 bases:

>100_bases
AAAACTATAGTGGTATATATTAATTTTCTATACCACTATAGTTTTTTTAATTAACTATAAATCTTTCAAGAAACTGTTTT
GTTCTTTCATTTTTAGGATT

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator PadR-Like Family; Transcriptional Regulator PadR Family; PadR-Like Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator PadR Family Protein; Transcriptional Regulator PadR-Type; ParR Family Transcriptional Regulator; Transcriptional Regulator Padr Family; Transcription Regulator PadR-Like Family

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MQEKVLRKLFLGFIHIHILHHAKVEPFFGSKMIEELREHGYSMSPGTLYPILHNMERDGLLLRKDRLIDGKIRKYYSITS
EGNEILEEAKSKAFELFKEIK

Sequences:

>Translated_101_residues
MQEKVLRKLFLGFIHIHILHHAKVEPFFGSKMIEELREHGYSMSPGTLYPILHNMERDGLLLRKDRLIDGKIRKYYSITS
EGNEILEEAKSKAFELFKEIK
>Mature_101_residues
MQEKVLRKLFLGFIHIHILHHAKVEPFFGSKMIEELREHGYSMSPGTLYPILHNMERDGLLLRKDRLIDGKIRKYYSITS
EGNEILEEAKSKAFELFKEIK

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11929; Mature: 11929

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEKVLRKLFLGFIHIHILHHAKVEPFFGSKMIEELREHGYSMSPGTLYPILHNMERDGL
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCE
LLRKDRLIDGKIRKYYSITSEGNEILEEAKSKAFELFKEIK
EEHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQEKVLRKLFLGFIHIHILHHAKVEPFFGSKMIEELREHGYSMSPGTLYPILHNMERDGL
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCE
LLRKDRLIDGKIRKYYSITSEGNEILEEAKSKAFELFKEIK
EEHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA