| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311073
Identifier: 18311073
GI number: 18311073
Start: 2399789
End: 2400094
Strand: Direct
Name: 18311073
Synonym: CPE2091
Alternate gene names: NA
Gene position: 2399789-2400094 (Clockwise)
Preceding gene: 18311072
Following gene: 18311076
Centisome position: 79.16
GC content: 26.8
Gene sequence:
>306_bases ATGCAAGAAAAAGTTTTAAGAAAATTATTTTTAGGTTTTATACATATCCATATCTTACACCATGCAAAAGTTGAACCTTT TTTCGGATCAAAAATGATTGAAGAACTTAGGGAACATGGATATTCTATGAGTCCCGGAACTTTATACCCAATACTTCATA ATATGGAGAGAGATGGTTTACTACTAAGAAAAGATAGATTAATAGATGGTAAGATAAGAAAATATTATAGTATTACATCA GAAGGTAATGAGATATTAGAAGAAGCTAAAAGTAAAGCATTTGAATTATTTAAAGAAATAAAATAA
Upstream 100 bases:
>100_bases TGAAAGAATTAAGGAGTATAATATAATAGAAAGCATTAACAGTAATCTATTTTCGATATCGTATTTATATATATATTTAT TTGTTATAGGAGATGACCCC
Downstream 100 bases:
>100_bases AAAACTATAGTGGTATATATTAATTTTCTATACCACTATAGTTTTTTTAATTAACTATAAATCTTTCAAGAAACTGTTTT GTTCTTTCATTTTTAGGATT
Product: PadR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator PadR-Like Family; Transcriptional Regulator PadR Family; PadR-Like Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator PadR Family Protein; Transcriptional Regulator PadR-Type; ParR Family Transcriptional Regulator; Transcriptional Regulator Padr Family; Transcription Regulator PadR-Like Family
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MQEKVLRKLFLGFIHIHILHHAKVEPFFGSKMIEELREHGYSMSPGTLYPILHNMERDGLLLRKDRLIDGKIRKYYSITS EGNEILEEAKSKAFELFKEIK
Sequences:
>Translated_101_residues MQEKVLRKLFLGFIHIHILHHAKVEPFFGSKMIEELREHGYSMSPGTLYPILHNMERDGLLLRKDRLIDGKIRKYYSITS EGNEILEEAKSKAFELFKEIK >Mature_101_residues MQEKVLRKLFLGFIHIHILHHAKVEPFFGSKMIEELREHGYSMSPGTLYPILHNMERDGLLLRKDRLIDGKIRKYYSITS EGNEILEEAKSKAFELFKEIK
Specific function: Unknown
COG id: COG1695
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11929; Mature: 11929
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEKVLRKLFLGFIHIHILHHAKVEPFFGSKMIEELREHGYSMSPGTLYPILHNMERDGL CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCE LLRKDRLIDGKIRKYYSITSEGNEILEEAKSKAFELFKEIK EEHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQEKVLRKLFLGFIHIHILHHAKVEPFFGSKMIEELREHGYSMSPGTLYPILHNMERDGL CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCE LLRKDRLIDGKIRKYYSITSEGNEILEEAKSKAFELFKEIK EEHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA