| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311056
Identifier: 18311056
GI number: 18311056
Start: 2376317
End: 2377486
Strand: Reverse
Name: 18311056
Synonym: CPE2074
Alternate gene names: NA
Gene position: 2377486-2376317 (Counterclockwise)
Preceding gene: 18311057
Following gene: 18311053
Centisome position: 78.43
GC content: 32.05
Gene sequence:
>1170_bases ATGATAGTAGAACCAAAGTTTAGAGGATTTATATGTACTACATCACATCCTATAGGTTGTAAAAAAAATGTTGAGAATCA AATAGAATACGTAAAAGAAAATGGAAAAATAGAGGGAGCTAAAAGAGTACTTGTATTAGGGGCTTCCACTGGATATGGAT TAGCAAGTGCTATTGTAGCTTCAGAAGCCTGTGATGCGGAAGTTTTAGGTGTTTCATTTGAGAGAGAGGCAAAAGGAAAA AGAACAGCTTCAGCAGGATGGTATAATATAGAATCATTAAAGAAATTTGTAGAAGGTGAAGGGAAAAAATTCATATCAGT AAATGGAGACGCTTTTTCTAATGAAGTTAAAAGTGAAGTTATAGACTTAATAAAAGAAAATATGGGAAAAGTAGATTTAG TTATATATTCCTTAGCAGCTCCAAAGAGAAAGGATCCTGTTTCAGGAGAAGTTTATAGTTCGTGTTTAAAAACTGTAGGA GCTCCTTTTACTAGTAAAACTTTAGATTTCCACACAGGAGAAATACAGAATATTACTATTAATCCAGCTACAGAGGAGGA AATAGAAGGTACTAGAAAAGTAATGGGTGGAGAAGATTGGATGCTATGGATTGAAGCATTAAAGGAAGCTAATGTCTTAG AAAATGGCGTTAAAACAATAGCATATTCATATATTGGACCAGAAGTTACCTATCCAATATACAGAGAAGGAACTATAGGA AGAGCTAAAAATGATTTAGAAAAAACTGCCGGAGAGATAACTAAGGTTTTAAAATCATTAAATGGAGAAGGATATATATC TGTAAATAAAGCTTTAGTAACGCAAGCTAGTTCAGCTATTCCAATAGTATCTTTATATATTTCAATTCTTTATAAAGTTA TGAAAGAAAAAGGAACTCATGAGGGGTGTATTGAGCAAATATACAGAATGTTTAAAGAGCTTTACGAAGGAAACTTAAAT TTAGACTCAGAAAATAGAATTAGAATAGATGATTTAGAGATGGCTGAGGATGTACAAAAGGCTATTGAAGAAATATGGCC ACAAATAACTAGTGAGAATGTTTTTGAATTAAGTGATGCAGAAGATTTTAAAAAGGAATTTTTCAAGTTATTTGGATTTG GTTTAGAGGGAGTAGATTACTCAGAGGATGTTGATATAACAACAGTTTAG
Upstream 100 bases:
>100_bases ACAAAATAGTATCAAAGATTAAAAAGAATAGATAAAGGGCTAAAGAAAATATGAGCCTTTAAAAATAATAAATGAAAAAG AAGAAGGGAGAAAAATCTTA
Downstream 100 bases:
>100_bases TATAAAAATATTATTTGATTAATTTTAAAAATATGAAAAGGTCATACTTTAGTTAAGTTACTAGAGTAAGGCCTTTTATA TTTTATTTAAAGTTACTTTA
Product: trans-2-enoyl-CoA reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MIVEPKFRGFICTTSHPIGCKKNVENQIEYVKENGKIEGAKRVLVLGASTGYGLASAIVASEACDAEVLGVSFEREAKGK RTASAGWYNIESLKKFVEGEGKKFISVNGDAFSNEVKSEVIDLIKENMGKVDLVIYSLAAPKRKDPVSGEVYSSCLKTVG APFTSKTLDFHTGEIQNITINPATEEEIEGTRKVMGGEDWMLWIEALKEANVLENGVKTIAYSYIGPEVTYPIYREGTIG RAKNDLEKTAGEITKVLKSLNGEGYISVNKALVTQASSAIPIVSLYISILYKVMKEKGTHEGCIEQIYRMFKELYEGNLN LDSENRIRIDDLEMAEDVQKAIEEIWPQITSENVFELSDAEDFKKEFFKLFGFGLEGVDYSEDVDITTV
Sequences:
>Translated_389_residues MIVEPKFRGFICTTSHPIGCKKNVENQIEYVKENGKIEGAKRVLVLGASTGYGLASAIVASEACDAEVLGVSFEREAKGK RTASAGWYNIESLKKFVEGEGKKFISVNGDAFSNEVKSEVIDLIKENMGKVDLVIYSLAAPKRKDPVSGEVYSSCLKTVG APFTSKTLDFHTGEIQNITINPATEEEIEGTRKVMGGEDWMLWIEALKEANVLENGVKTIAYSYIGPEVTYPIYREGTIG RAKNDLEKTAGEITKVLKSLNGEGYISVNKALVTQASSAIPIVSLYISILYKVMKEKGTHEGCIEQIYRMFKELYEGNLN LDSENRIRIDDLEMAEDVQKAIEEIWPQITSENVFELSDAEDFKKEFFKLFGFGLEGVDYSEDVDITTV >Mature_389_residues MIVEPKFRGFICTTSHPIGCKKNVENQIEYVKENGKIEGAKRVLVLGASTGYGLASAIVASEACDAEVLGVSFEREAKGK RTASAGWYNIESLKKFVEGEGKKFISVNGDAFSNEVKSEVIDLIKENMGKVDLVIYSLAAPKRKDPVSGEVYSSCLKTVG APFTSKTLDFHTGEIQNITINPATEEEIEGTRKVMGGEDWMLWIEALKEANVLENGVKTIAYSYIGPEVTYPIYREGTIG RAKNDLEKTAGEITKVLKSLNGEGYISVNKALVTQASSAIPIVSLYISILYKVMKEKGTHEGCIEQIYRMFKELYEGNLN LDSENRIRIDDLEMAEDVQKAIEEIWPQITSENVFELSDAEDFKKEFFKLFGFGLEGVDYSEDVDITTV
Specific function: Probable reductase [H]
COG id: COG3007
COG function: function code S; Uncharacterized paraquat-inducible protein B
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TER reductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR010758 [H]
Pfam domain/function: PF07055 scADH [H]
EC number: NA
Molecular weight: Translated: 43138; Mature: 43138
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVEPKFRGFICTTSHPIGCKKNVENQIEYVKENGKIEGAKRVLVLGASTGYGLASAIVA CCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHH SEACDAEVLGVSFEREAKGKRTASAGWYNIESLKKFVEGEGKKFISVNGDAFSNEVKSEV HHCCCCHHCCCCCCHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHH IDLIKENMGKVDLVIYSLAAPKRKDPVSGEVYSSCLKTVGAPFTSKTLDFHTGEIQNITI HHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEE NPATEEEIEGTRKVMGGEDWMLWIEALKEANVLENGVKTIAYSYIGPEVTYPIYREGTIG CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCC RAKNDLEKTAGEITKVLKSLNGEGYISVNKALVTQASSAIPIVSLYISILYKVMKEKGTH CHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC EGCIEQIYRMFKELYEGNLNLDSENRIRIDDLEMAEDVQKAIEEIWPQITSENVFELSDA HHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCEEECCCH EDFKKEFFKLFGFGLEGVDYSEDVDITTV HHHHHHHHHHHCCCCCCCCCCCCCCCEEC >Mature Secondary Structure MIVEPKFRGFICTTSHPIGCKKNVENQIEYVKENGKIEGAKRVLVLGASTGYGLASAIVA CCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHH SEACDAEVLGVSFEREAKGKRTASAGWYNIESLKKFVEGEGKKFISVNGDAFSNEVKSEV HHCCCCHHCCCCCCHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHH IDLIKENMGKVDLVIYSLAAPKRKDPVSGEVYSSCLKTVGAPFTSKTLDFHTGEIQNITI HHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEE NPATEEEIEGTRKVMGGEDWMLWIEALKEANVLENGVKTIAYSYIGPEVTYPIYREGTIG CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCC RAKNDLEKTAGEITKVLKSLNGEGYISVNKALVTQASSAIPIVSLYISILYKVMKEKGTH CHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC EGCIEQIYRMFKELYEGNLNLDSENRIRIDDLEMAEDVQKAIEEIWPQITSENVFELSDA HHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCEEECCCH EDFKKEFFKLFGFGLEGVDYSEDVDITTV HHHHHHHHHHHCCCCCCCCCCCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA