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The map label for this gene is recJ [H]

Identifier: 18311047

GI number: 18311047

Start: 2361959

End: 2363737

Strand: Reverse

Name: recJ [H]

Synonym: CPE2065

Alternate gene names: 18311047

Gene position: 2363737-2361959 (Counterclockwise)

Preceding gene: 18311048

Following gene: 18311045

Centisome position: 77.97

GC content: 30.3

Gene sequence:

>1779_bases
GTGAGAGAGCAGTGGCTACTTAAACAAAGAAAAAGAGATGAAATAGAAAATTTAAAGGAAGAATTAAATATAGATTTATT
AACATCTATTCTTTTGGTGAATAGAAATATAAAGGATGAAAAAGATGCACGTGAATTTTTATTTGGTGGAATTGAAAATT
TAAATGACCCTTATCTTATGAAAGATATGGAGAAAGGGGTTAAAAGGGTAAAAGAAGCCATAGAAAAGGGAGATAAAATA
ACCATATATGGAGACTATGATTGCGACGGTGTATCAAGCACTTCAATTCTTTATAAAGGGCTAAAAAGATGCAATGCTAA
CTTTAATTATCATATTCCAGATAGAGAAGATGAAGGGTATGGTATGAACTCTAAGAGGGTTAAAATTTTAAAGGAAGAAG
GCACTAAGGTAATTTTAACTTGCGACAATGGAATTGCAGCCTTTGAAGAAATAGATTTAGCTGAGAATTTAGGCATGGAT
GTAATATTAACAGATCATCACGATATTCCTTTAGTTAAAGATGAAAATGGAGAGATAAATAAAGAAATTCCAAAGGCTTA
TGCTGTTATAAATCCTAAACAAGAAGACTGTAATTATCCATTTAAATCCCTATGTGGAGCAGGAATTGCCTTTAAATTTA
TATGTGCATTATATAAAGAACTAGGGATTCCACAGAAGGAAGCTTTAGAATTATTAGAGATTTGTGCTATTGCTACTGTG
TGTGATGTAGTTGATCTATTAGGGGAAAATAGAATAATAGTAAAAAATGGCTTAGAAATGCTTAATAATACTAAAAATAA
AGGATTAATAGCCTTAAAGAAATATACAGGTCTTGAAGGAAAGGAAATGGCACAATATCACTTAGGATTTGTTATAGGCC
CTTGTATAAATGCCACTGGAAGACTTGAAACAGCTGACTTATCTGTTGAATTACTTTTAGCTGAAGATGATGAAAGGGCA
GATGCTTTAGCTAAGGAGCTTTTTGAGCTTAATCAAAGAAGACAGGAATTAACTAAAGACAGCGTTGATATGGTAATAAA
GCAAATAGAAGATAATAATATGGAAAATGACAAGGTTATTTTAGTTTATAATCCTTATATACATGAAAGTATTGCTGGAA
TTGTAGCAGGGAGAATAAAAGAAAAATATAATGTTCCTACAATAATAATGACTAAAGGAAAAGATATGCCTAAGGGATCT
GCAAGGTCTATAGAAGAATATAATATTTTTGAGGAATTATCAAAATGTAAAGAGCTCATAAGCAAATTTGGAGGACATCC
AATGGCTGCTGGTTTATCTGTAGAAGAAAAAAACATACCCTTATTAAGAAATATGTTATTAGAAAACTGTAAATTAACAG
ATTATGATATAATACCAAAGGTTAGAATAGATGTTAAATTACCTTTAGAAAGTTTAAATTACGGATTAGTAGATAGTTTA
GATAAGTTAGAACCCTTTGGAAAAGGAAATTCTAGCCCGCTTTTTGGAGAGAAAGATGTTAAAGTAAGCAGGGTTTGGAT
AATGGGAAAAGAGCAGAATGTAATTAAATTTAGATGTAAATTAAGGAATAGTTACAAAACCATAGATGCCATAGCCTTTG
GAAATAAGGTTGAGGAATTTAAAGAAGATTTTGCTAATAAATATGGAGAAGAGGAATTATTAAGAGTATTAGATGGTGGA
AACTGCAACTTTAGCGTTGATTTAATTTATTACCCAAATATAAATGAGTTTAATGGGAATAAATCTATTCAAGCTAATGT
AAAATACTTTAGATTATAA

Upstream 100 bases:

>100_bases
TAAACTTAGTCGAAAATTTAAGTTTAAAAGATATGAAAAATTTAATTAAAAGAGTTTTAAAGAAATCCATTGTGCAAATA
ATTAACTAAGAGGTGATGGC

Downstream 100 bases:

>100_bases
AATTAAAGGAGCAATATTTTAAAAATATTGCTCCAATGTTTTGTATATAATTAGGCATAAATTAATCATATACAATATTA
ATATTTAATTTTATTTAACA

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 592; Mature: 592

Protein sequence:

>592_residues
MREQWLLKQRKRDEIENLKEELNIDLLTSILLVNRNIKDEKDAREFLFGGIENLNDPYLMKDMEKGVKRVKEAIEKGDKI
TIYGDYDCDGVSSTSILYKGLKRCNANFNYHIPDREDEGYGMNSKRVKILKEEGTKVILTCDNGIAAFEEIDLAENLGMD
VILTDHHDIPLVKDENGEINKEIPKAYAVINPKQEDCNYPFKSLCGAGIAFKFICALYKELGIPQKEALELLEICAIATV
CDVVDLLGENRIIVKNGLEMLNNTKNKGLIALKKYTGLEGKEMAQYHLGFVIGPCINATGRLETADLSVELLLAEDDERA
DALAKELFELNQRRQELTKDSVDMVIKQIEDNNMENDKVILVYNPYIHESIAGIVAGRIKEKYNVPTIIMTKGKDMPKGS
ARSIEEYNIFEELSKCKELISKFGGHPMAAGLSVEEKNIPLLRNMLLENCKLTDYDIIPKVRIDVKLPLESLNYGLVDSL
DKLEPFGKGNSSPLFGEKDVKVSRVWIMGKEQNVIKFRCKLRNSYKTIDAIAFGNKVEEFKEDFANKYGEEELLRVLDGG
NCNFSVDLIYYPNINEFNGNKSIQANVKYFRL

Sequences:

>Translated_592_residues
MREQWLLKQRKRDEIENLKEELNIDLLTSILLVNRNIKDEKDAREFLFGGIENLNDPYLMKDMEKGVKRVKEAIEKGDKI
TIYGDYDCDGVSSTSILYKGLKRCNANFNYHIPDREDEGYGMNSKRVKILKEEGTKVILTCDNGIAAFEEIDLAENLGMD
VILTDHHDIPLVKDENGEINKEIPKAYAVINPKQEDCNYPFKSLCGAGIAFKFICALYKELGIPQKEALELLEICAIATV
CDVVDLLGENRIIVKNGLEMLNNTKNKGLIALKKYTGLEGKEMAQYHLGFVIGPCINATGRLETADLSVELLLAEDDERA
DALAKELFELNQRRQELTKDSVDMVIKQIEDNNMENDKVILVYNPYIHESIAGIVAGRIKEKYNVPTIIMTKGKDMPKGS
ARSIEEYNIFEELSKCKELISKFGGHPMAAGLSVEEKNIPLLRNMLLENCKLTDYDIIPKVRIDVKLPLESLNYGLVDSL
DKLEPFGKGNSSPLFGEKDVKVSRVWIMGKEQNVIKFRCKLRNSYKTIDAIAFGNKVEEFKEDFANKYGEEELLRVLDGG
NCNFSVDLIYYPNINEFNGNKSIQANVKYFRL
>Mature_592_residues
MREQWLLKQRKRDEIENLKEELNIDLLTSILLVNRNIKDEKDAREFLFGGIENLNDPYLMKDMEKGVKRVKEAIEKGDKI
TIYGDYDCDGVSSTSILYKGLKRCNANFNYHIPDREDEGYGMNSKRVKILKEEGTKVILTCDNGIAAFEEIDLAENLGMD
VILTDHHDIPLVKDENGEINKEIPKAYAVINPKQEDCNYPFKSLCGAGIAFKFICALYKELGIPQKEALELLEICAIATV
CDVVDLLGENRIIVKNGLEMLNNTKNKGLIALKKYTGLEGKEMAQYHLGFVIGPCINATGRLETADLSVELLLAEDDERA
DALAKELFELNQRRQELTKDSVDMVIKQIEDNNMENDKVILVYNPYIHESIAGIVAGRIKEKYNVPTIIMTKGKDMPKGS
ARSIEEYNIFEELSKCKELISKFGGHPMAAGLSVEEKNIPLLRNMLLENCKLTDYDIIPKVRIDVKLPLESLNYGLVDSL
DKLEPFGKGNSSPLFGEKDVKVSRVWIMGKEQNVIKFRCKLRNSYKTIDAIAFGNKVEEFKEDFANKYGEEELLRVLDGG
NCNFSVDLIYYPNINEFNGNKSIQANVKYFRL

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=606, Percent_Identity=30.03300330033, Blast_Score=247, Evalue=2e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 67196; Mature: 67196

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREQWLLKQRKRDEIENLKEELNIDLLTSILLVNRNIKDEKDAREFLFGGIENLNDPYLM
CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHCHHCCCCCHHH
KDMEKGVKRVKEAIEKGDKITIYGDYDCDGVSSTSILYKGLKRCNANFNYHIPDREDEGY
HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCC
GMNSKRVKILKEEGTKVILTCDNGIAAFEEIDLAENLGMDVILTDHHDIPLVKDENGEIN
CCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCEEECCCCCCC
KEIPKAYAVINPKQEDCNYPFKSLCGAGIAFKFICALYKELGIPQKEALELLEICAIATV
HHCCCCEEEECCCHHHCCCCHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
CDVVDLLGENRIIVKNGLEMLNNTKNKGLIALKKYTGLEGKEMAQYHLGFVIGPCINATG
HHHHHHHCCCEEEECCCHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCEECCCCCCC
RLETADLSVELLLAEDDERADALAKELFELNQRRQELTKDSVDMVIKQIEDNNMENDKVI
CEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
LVYNPYIHESIAGIVAGRIKEKYNVPTIIMTKGKDMPKGSARSIEEYNIFEELSKCKELI
EEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH
SKFGGHPMAAGLSVEEKNIPLLRNMLLENCKLTDYDIIPKVRIDVKLPLESLNYGLVDSL
HHHCCCCEECCCEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHCCCCHHHCH
DKLEPFGKGNSSPLFGEKDVKVSRVWIMGKEQNVIKFRCKLRNSYKTIDAIAFGNKVEEF
HHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHCCHHHHH
KEDFANKYGEEELLRVLDGGNCNFSVDLIYYPNINEFNGNKSIQANVKYFRL
HHHHHHHCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCEEEECEEEEEC
>Mature Secondary Structure
MREQWLLKQRKRDEIENLKEELNIDLLTSILLVNRNIKDEKDAREFLFGGIENLNDPYLM
CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHCHHCCCCCHHH
KDMEKGVKRVKEAIEKGDKITIYGDYDCDGVSSTSILYKGLKRCNANFNYHIPDREDEGY
HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCC
GMNSKRVKILKEEGTKVILTCDNGIAAFEEIDLAENLGMDVILTDHHDIPLVKDENGEIN
CCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCEEECCCCCCC
KEIPKAYAVINPKQEDCNYPFKSLCGAGIAFKFICALYKELGIPQKEALELLEICAIATV
HHCCCCEEEECCCHHHCCCCHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
CDVVDLLGENRIIVKNGLEMLNNTKNKGLIALKKYTGLEGKEMAQYHLGFVIGPCINATG
HHHHHHHCCCEEEECCCHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCEECCCCCCC
RLETADLSVELLLAEDDERADALAKELFELNQRRQELTKDSVDMVIKQIEDNNMENDKVI
CEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
LVYNPYIHESIAGIVAGRIKEKYNVPTIIMTKGKDMPKGSARSIEEYNIFEELSKCKELI
EEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH
SKFGGHPMAAGLSVEEKNIPLLRNMLLENCKLTDYDIIPKVRIDVKLPLESLNYGLVDSL
HHHCCCCEECCCEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHCCCCHHHCH
DKLEPFGKGNSSPLFGEKDVKVSRVWIMGKEQNVIKFRCKLRNSYKTIDAIAFGNKVEEF
HHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHCCHHHHH
KEDFANKYGEEELLRVLDGGNCNFSVDLIYYPNINEFNGNKSIQANVKYFRL
HHHHHHHCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCEEEECEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]