Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is ppaC [H]

Identifier: 18311037

GI number: 18311037

Start: 2347871

End: 2349520

Strand: Direct

Name: ppaC [H]

Synonym: CPE2055

Alternate gene names: 18311037

Gene position: 2347871-2349520 (Clockwise)

Preceding gene: 18311035

Following gene: 18311046

Centisome position: 77.45

GC content: 32.55

Gene sequence:

>1650_bases
ATGAAGGATGTTATATACATTACAGGACATAAAAATCCTGATTCAGATTCAATATGTGCTGCCTTAGCATATGCTGAATT
TAAAAACAAAACTCAAGACACTCCTGCTATACCAGTTAGATTAGGAAATGTTAGCCAAGAGACTCAATACATACTTGATT
ATTTTGGTGTAGAAGCACCTCAATTTTTAGAAACAGTTAAACTAAAAGTTGAAGATTTAGAAATGGATAAAATAGCTCCA
TTAGCTCCAGAAGTTTCATTAAAAATGGCTTGGAACATAATGAGAGATAAAAACTTAAAATCAATCCCTGTTGCTGATGG
AAATAACCACTTACTTGGAATGTTATCAACATCAAACATAACTGCAACATACATGGATATTTGGGATAGCAATATTCTTG
CTAAAAGTGCTACTTCATTAGATAACATATTAGATACATTATCTGCTGAAGCTCAAAACATAAATGAAGAAAGAAAAGTA
TTCCCAGGAAAAGTTGTAGTTGCTGCTATGCAAGCTGAATCTTTAAAAGAATTCATAAGCGAAGGCGACATAGCTATAGC
TGGAGATAGAGCTGAAATACAAGCTGAATTAATAGAGTTAAAAGTTTCTTTATTAATAGTAACAGGTGGACATACACCTT
CTAAAGAAATAATAGAACTTGCTAAGAAAAATAACATAACTGTTATTACAACTCCTCATGATTCATTCACTGCATCAAGA
TTAATCGTTCAAAGTTTACCAGTAGACTATGTTATGACTAAAGATAACTTAGTAGCTGTATCTACTGATGATTTAGTTGA
AGATGTAAAAGTAACAATGAGTGAAACTAGATACAGTAACTATCCTGTAATAGATGAAAATAACAAAGTAGTTGGTTCAA
TTGCAAGATTCCACTTAATTTCTACTCATAAGAAAAAAGTTATCCAAGTTGACCATAACGAAAGAGGTCAATCAGTACAT
GGTTTAGAGGATGCTGAAGTATTAGAGATCATAGACCATCATAGAGTTGCAGATATCCAAACTGGTAACCCTATATACTT
CAGAAATGAACCTCTTGGAAGTACTTCAACAATAGTTGCTAAGAGATTCTTCGAAAATGGAATCAGACCATCAAGAGAAG
CTGCTGGACTTTTATGTGGAGCTATAATTTCAGACACATTATTATTTAAATCACCAACTTGTACTCCACAAGACGTGAAA
ATGTGCAGAAAACTTGCTGAAATAGCAGGAATAGTTCCTGAAACATTTGCTAAAGAAATGTTTAAAGCTGGTACTTCATT
AAAAGGAAAGTCTATTGAAGAAATATTCAACGCTGACTTCAAACCTTTCACAATTGAAGGTGTTAAAGTAGGTGTTGCTC
AAGTTAACACAATGGACATAGAAGGATTCATGCCTTTAAAAGGTGAAATGTTAGATTACATGAATCAAAAAGCTGAATCA
ATGGGATTAGAAATGATTATGTTATTACTTACTGACATAATAAATGAAGGTTCACAAATATTAGTGGCTGGAAGAAGTCC
TGAAATAGCTGAAGAAGCATTCAAAGTTAAATTAGAGGACTCAACTACTTTCTTACCTGGAGTTCTTTCAAGAAAGAAAC
AAGTTGTACCACCATTAACTCAAATAATCACAACAAGAGTTAGTAAATAA

Upstream 100 bases:

>100_bases
TATGATAAAATGAGTGTTGTTAAACTTTACTTTTCATAATTTAGGAATTAAAATATATTCATGAATTAAAAAATTTCGAA
TAACAAAGGAGGCAACCTAA

Downstream 100 bases:

>100_bases
TTTTAATTAAAATAAAAGCAATCTCTAAATAGAGATTGCTTTTTTATTTCCAATTTAAAATTTTATAATTCTTATTATTT
TTCTTATAATTTATTAAATA

Product: putative manganese-dependent inorganic pyrophosphatase

Products: NA

Alternate protein names: Pyrophosphate phospho-hydrolase; PPase [H]

Number of amino acids: Translated: 549; Mature: 549

Protein sequence:

>549_residues
MKDVIYITGHKNPDSDSICAALAYAEFKNKTQDTPAIPVRLGNVSQETQYILDYFGVEAPQFLETVKLKVEDLEMDKIAP
LAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMDIWDSNILAKSATSLDNILDTLSAEAQNINEERKV
FPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAKKNNITVITTPHDSFTASR
LIVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLISTHKKKVIQVDHNERGQSVH
GLEDAEVLEIIDHHRVADIQTGNPIYFRNEPLGSTSTIVAKRFFENGIRPSREAAGLLCGAIISDTLLFKSPTCTPQDVK
MCRKLAEIAGIVPETFAKEMFKAGTSLKGKSIEEIFNADFKPFTIEGVKVGVAQVNTMDIEGFMPLKGEMLDYMNQKAES
MGLEMIMLLLTDIINEGSQILVAGRSPEIAEEAFKVKLEDSTTFLPGVLSRKKQVVPPLTQIITTRVSK

Sequences:

>Translated_549_residues
MKDVIYITGHKNPDSDSICAALAYAEFKNKTQDTPAIPVRLGNVSQETQYILDYFGVEAPQFLETVKLKVEDLEMDKIAP
LAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMDIWDSNILAKSATSLDNILDTLSAEAQNINEERKV
FPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAKKNNITVITTPHDSFTASR
LIVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLISTHKKKVIQVDHNERGQSVH
GLEDAEVLEIIDHHRVADIQTGNPIYFRNEPLGSTSTIVAKRFFENGIRPSREAAGLLCGAIISDTLLFKSPTCTPQDVK
MCRKLAEIAGIVPETFAKEMFKAGTSLKGKSIEEIFNADFKPFTIEGVKVGVAQVNTMDIEGFMPLKGEMLDYMNQKAES
MGLEMIMLLLTDIINEGSQILVAGRSPEIAEEAFKVKLEDSTTFLPGVLSRKKQVVPPLTQIITTRVSK
>Mature_549_residues
MKDVIYITGHKNPDSDSICAALAYAEFKNKTQDTPAIPVRLGNVSQETQYILDYFGVEAPQFLETVKLKVEDLEMDKIAP
LAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMDIWDSNILAKSATSLDNILDTLSAEAQNINEERKV
FPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAKKNNITVITTPHDSFTASR
LIVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLISTHKKKVIQVDHNERGQSVH
GLEDAEVLEIIDHHRVADIQTGNPIYFRNEPLGSTSTIVAKRFFENGIRPSREAAGLLCGAIISDTLLFKSPTCTPQDVK
MCRKLAEIAGIVPETFAKEMFKAGTSLKGKSIEEIFNADFKPFTIEGVKVGVAQVNTMDIEGFMPLKGEMLDYMNQKAES
MGLEMIMLLLTDIINEGSQILVAGRSPEIAEEAFKVKLEDSTTFLPGVLSRKKQVVPPLTQIITTRVSK

Specific function: Unknown

COG id: COG1227

COG function: function code C; Inorganic pyrophosphatase/exopolyphosphatase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001807
- InterPro:   IPR000644
- InterPro:   IPR004097
- InterPro:   IPR010766
- InterPro:   IPR001667 [H]

Pfam domain/function: PF00571 CBS; PF01368 DHH; PF02833 DHHA2; PF07085 DRTGG [H]

EC number: =3.6.1.1 [H]

Molecular weight: Translated: 60528; Mature: 60528

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDVIYITGHKNPDSDSICAALAYAEFKNKTQDTPAIPVRLGNVSQETQYILDYFGVEAP
CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCH
QFLETVKLKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNI
HHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCE
TATYMDIWDSNILAKSATSLDNILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFIS
EEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEHHHHHHHHHHHC
EGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAKKNNITVITTPHDSFTASR
CCCEEEECCHHHHHHHHHEEEEEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCHHHHH
LIVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLI
HHHHHCCCCEEEECCCEEEEECHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHH
STHKKKVIQVDHNERGQSVHGLEDAEVLEIIDHHRVADIQTGNPIYFRNEPLGSTSTIVA
HCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCEEEECCCCCCCHHHHHH
KRFFENGIRPSREAAGLLCGAIISDTLLFKSPTCTPQDVKMCRKLAEIAGIVPETFAKEM
HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
FKAGTSLKGKSIEEIFNADFKPFTIEGVKVGVAQVNTMDIEGFMPLKGEMLDYMNQKAES
HHCCCCCCCCCHHHHHCCCCCEEEECCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHH
MGLEMIMLLLTDIINEGSQILVAGRSPEIAEEAFKVKLEDSTTFLPGVLSRKKQVVPPLT
HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHEEEECCCCCCCCHHHHCCCCCCCHHH
QIITTRVSK
HHHHHHCCC
>Mature Secondary Structure
MKDVIYITGHKNPDSDSICAALAYAEFKNKTQDTPAIPVRLGNVSQETQYILDYFGVEAP
CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCH
QFLETVKLKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNI
HHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCE
TATYMDIWDSNILAKSATSLDNILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFIS
EEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEHHHHHHHHHHHC
EGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAKKNNITVITTPHDSFTASR
CCCEEEECCHHHHHHHHHEEEEEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCHHHHH
LIVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLI
HHHHHCCCCEEEECCCEEEEECHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHH
STHKKKVIQVDHNERGQSVHGLEDAEVLEIIDHHRVADIQTGNPIYFRNEPLGSTSTIVA
HCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCEEEECCCCCCCHHHHHH
KRFFENGIRPSREAAGLLCGAIISDTLLFKSPTCTPQDVKMCRKLAEIAGIVPETFAKEM
HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
FKAGTSLKGKSIEEIFNADFKPFTIEGVKVGVAQVNTMDIEGFMPLKGEMLDYMNQKAES
HHCCCCCCCCCHHHHHCCCCCEEEECCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHH
MGLEMIMLLLTDIINEGSQILVAGRSPEIAEEAFKVKLEDSTTFLPGVLSRKKQVVPPLT
HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHEEEECCCCCCCCHHHHCCCCCCCHHH
QIITTRVSK
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]