| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is spoVAC [H]
Identifier: 18311029
GI number: 18311029
Start: 2338709
End: 2339176
Strand: Reverse
Name: spoVAC [H]
Synonym: CPE2047
Alternate gene names: 18311029
Gene position: 2339176-2338709 (Counterclockwise)
Preceding gene: 18311030
Following gene: 18311028
Centisome position: 77.16
GC content: 33.33
Gene sequence:
>468_bases ATGTATGAAAATGACAAAAAAATAAGGACTAAGTTTGATCAACTTGAACAACAAATAAGACCAAAACCAAAGCTTCTTAG AAATTGTATAATGGCATTTATAGTAGGTGGATTAATTTGTGTAATAGGACAATTTGTGAGAAATACTTTTTTATACTATG GCTTCACAGAAGAACAAGTTAGTAGTTTAACACCTATGACTATGGTTTTTTTAGGAGCTCTTTTAACAGGACTTGGATTA TATGATAGAATAGCGGCTAAGGCTGGAGCAGGTACTATAGTTCCTATTACTGGTTTTTCAAATGCCATGGTGTCACCTGC TATAGAATTTAAAAAAGAAGGCTTTGTAATGGGAGTAGGGGCTAAAATGTTTACTATTGCAGGTCCTGTTTTAGTTTATG GTACAGGAACCTCTGTAATAGTTGGACTAATATATTACTTATTACTTAGAGTTGGAATTGTGGGGTGA
Upstream 100 bases:
>100_bases AAAGTAATCATATAAAATAATGCTCATTTTTTTGTATAGATTAAAAATAAGAACAAATAATATAAGTATATTTTAATAGA AAAGGGTGATTAATATAGCT
Downstream 100 bases:
>100_bases TAAGAATGAGTAATAATACAAAAAGAGTAGGATCTCAAACAATAGAATTAAAAAGTAAACCTAGAATAATAGCTACATAT AGTGTGGTTGGTCCTAGAGA
Product: stage V sporulation protein AC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MYENDKKIRTKFDQLEQQIRPKPKLLRNCIMAFIVGGLICVIGQFVRNTFLYYGFTEEQVSSLTPMTMVFLGALLTGLGL YDRIAAKAGAGTIVPITGFSNAMVSPAIEFKKEGFVMGVGAKMFTIAGPVLVYGTGTSVIVGLIYYLLLRVGIVG
Sequences:
>Translated_155_residues MYENDKKIRTKFDQLEQQIRPKPKLLRNCIMAFIVGGLICVIGQFVRNTFLYYGFTEEQVSSLTPMTMVFLGALLTGLGL YDRIAAKAGAGTIVPITGFSNAMVSPAIEFKKEGFVMGVGAKMFTIAGPVLVYGTGTSVIVGLIYYLLLRVGIVG >Mature_155_residues MYENDKKIRTKFDQLEQQIRPKPKLLRNCIMAFIVGGLICVIGQFVRNTFLYYGFTEEQVSSLTPMTMVFLGALLTGLGL YDRIAAKAGAGTIVPITGFSNAMVSPAIEFKKEGFVMGVGAKMFTIAGPVLVYGTGTSVIVGLIYYLLLRVGIVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014203 - InterPro: IPR005562 [H]
Pfam domain/function: PF03862 SpoVA [H]
EC number: NA
Molecular weight: Translated: 16871; Mature: 16871
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYENDKKIRTKFDQLEQQIRPKPKLLRNCIMAFIVGGLICVIGQFVRNTFLYYGFTEEQV CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH SSLTPMTMVFLGALLTGLGLYDRIAAKAGAGTIVPITGFSNAMVSPAIEFKKEGFVMGVG HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCEEEECC AKMFTIAGPVLVYGTGTSVIVGLIYYLLLRVGIVG HHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYENDKKIRTKFDQLEQQIRPKPKLLRNCIMAFIVGGLICVIGQFVRNTFLYYGFTEEQV CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH SSLTPMTMVFLGALLTGLGLYDRIAAKAGAGTIVPITGFSNAMVSPAIEFKKEGFVMGVG HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCEEEECC AKMFTIAGPVLVYGTGTSVIVGLIYYLLLRVGIVG HHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3926949; 8969508; 9384377 [H]