| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is cotS [H]
Identifier: 18310992
GI number: 18310992
Start: 2302395
End: 2303474
Strand: Direct
Name: cotS [H]
Synonym: CPE2010
Alternate gene names: 18310992
Gene position: 2302395-2303474 (Clockwise)
Preceding gene: 18310979
Following gene: 18311024
Centisome position: 75.95
GC content: 25.74
Gene sequence:
>1080_bases ATGGGAAAGCATTCTAAAAAGTTTAATGAAGCTGATGAAATTTTTAATGCTGTAGAATCCATAGTTTTACCTATGTATAA TTTAGAAAACTATTCTATAGAGAATATAAAATTTAAAAATACAGATAAAAATAGAGCTGTTTATAAATTAATTGATGATA TTAATAATCCTAAAAATACCTTTTGCTTAAAAAAGGTTTATTATGATGAAGGGACTCTCTTATTCATATATTCAGTTATG GAATGGTTTGCTAGAAATGAAATTAAGCTTCCAAAAATGCTCCCTTCAAAGTTTAATGGTAGATTTGTTAAAGCAAATAA TATGCTTTTTATGCTCTGTCCATGGGTTAAAGGTGAAAAATGTAACTTCGATAACTTACAACATATCTTGCTATCCATAG AAAATCTAGCTAAAATGCATAATTGTTCAAGAAACTTTAAAGCAATTGAAGGTAGTTTAATTAAAACTGGATTTGATAGT CTCTACATATCCACATTAAAACACTTTAATAAGATTCTTTCATCATTTAATACTGCAACTAAAATGAAACATAAGGACAA GTTTTCATCAATATTTTTAGATGTTTTTGATGAAAATATTTATCTAGCTAAAGAAGCTCTCTTAGTTTCAGGTTCTATTA ATGACAAAAATTTAAGTAGATCTCTTTGCCATGGAGATTATGTAAATAAAAATATTTTAATTGATAATACTGATGTTTGG GTAATTGATTTTGATAAAGCATCCTTAAATTATTCTATGTATGATTTATGTTATTTTATGAGACGTTTATTAAAAAGATC AAATACTAATTGGGATATAGACTTAACAAGAAAGATACTTAAAACATATAATTCAATTGCTCCTCTTACAGAGGATGACT TCAAATATGTTTTTTCATATCTAGCATTTCCACAAAAATATTGGCGCTTATCAAAGGACTATTATAATAACATAAAAAAA TGTAATAAATCAATGTTTGTAGAATCTCTTAAGGAAGTTTCACTAGATACCTATGCTCAGGTTAGATTTGTTGGAGAACT TAGAACATTGTTTTCTACTGAATTTAAAATTAAAGTTTAA
Upstream 100 bases:
>100_bases ATTTTTTGACTTTAAATCAAAGTATTTCACATTTTAAAGTATAATCTAAAGTTAATCATAATATTCTTATAATAAGGAAT TTTTTATTAGGAGGTTAATC
Downstream 100 bases:
>100_bases ATAAAGGAGTATTCATAATGAATACTCCTTTATTTTATATAATCTTATTTATTATCTTTTATTTTTAACTTGTGCTTGTG CAGCTGCAAGTCTTGCTAAT
Product: spore coat protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MGKHSKKFNEADEIFNAVESIVLPMYNLENYSIENIKFKNTDKNRAVYKLIDDINNPKNTFCLKKVYYDEGTLLFIYSVM EWFARNEIKLPKMLPSKFNGRFVKANNMLFMLCPWVKGEKCNFDNLQHILLSIENLAKMHNCSRNFKAIEGSLIKTGFDS LYISTLKHFNKILSSFNTATKMKHKDKFSSIFLDVFDENIYLAKEALLVSGSINDKNLSRSLCHGDYVNKNILIDNTDVW VIDFDKASLNYSMYDLCYFMRRLLKRSNTNWDIDLTRKILKTYNSIAPLTEDDFKYVFSYLAFPQKYWRLSKDYYNNIKK CNKSMFVESLKEVSLDTYAQVRFVGELRTLFSTEFKIKV
Sequences:
>Translated_359_residues MGKHSKKFNEADEIFNAVESIVLPMYNLENYSIENIKFKNTDKNRAVYKLIDDINNPKNTFCLKKVYYDEGTLLFIYSVM EWFARNEIKLPKMLPSKFNGRFVKANNMLFMLCPWVKGEKCNFDNLQHILLSIENLAKMHNCSRNFKAIEGSLIKTGFDS LYISTLKHFNKILSSFNTATKMKHKDKFSSIFLDVFDENIYLAKEALLVSGSINDKNLSRSLCHGDYVNKNILIDNTDVW VIDFDKASLNYSMYDLCYFMRRLLKRSNTNWDIDLTRKILKTYNSIAPLTEDDFKYVFSYLAFPQKYWRLSKDYYNNIKK CNKSMFVESLKEVSLDTYAQVRFVGELRTLFSTEFKIKV >Mature_358_residues GKHSKKFNEADEIFNAVESIVLPMYNLENYSIENIKFKNTDKNRAVYKLIDDINNPKNTFCLKKVYYDEGTLLFIYSVME WFARNEIKLPKMLPSKFNGRFVKANNMLFMLCPWVKGEKCNFDNLQHILLSIENLAKMHNCSRNFKAIEGSLIKTGFDSL YISTLKHFNKILSSFNTATKMKHKDKFSSIFLDVFDENIYLAKEALLVSGSINDKNLSRSLCHGDYVNKNILIDNTDVWV IDFDKASLNYSMYDLCYFMRRLLKRSNTNWDIDLTRKILKTYNSIAPLTEDDFKYVFSYLAFPQKYWRLSKDYYNNIKKC NKSMFVESLKEVSLDTYAQVRFVGELRTLFSTEFKIKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Spore wall, spore coat [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CotS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR011009 - InterPro: IPR014255 [H]
Pfam domain/function: PF01636 APH [H]
EC number: NA
Molecular weight: Translated: 42285; Mature: 42154
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKHSKKFNEADEIFNAVESIVLPMYNLENYSIENIKFKNTDKNRAVYKLIDDINNPKNT CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCHH FCLKKVYYDEGTLLFIYSVMEWFARNEIKLPKMLPSKFNGRFVKANNMLFMLCPWVKGEK EEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEEECCEEEEEECCCCCCC CNFDNLQHILLSIENLAKMHNCSRNFKAIEGSLIKTGFDSLYISTLKHFNKILSSFNTAT CCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KMKHKDKFSSIFLDVFDENIYLAKEALLVSGSINDKNLSRSLCHGDYVNKNILIDNTDVW HHHHHHHHHHHHHHHHCCCEEEEEHEEEEECCCCCHHHHHHHHCCCCCCCCEEEECCEEE VIDFDKASLNYSMYDLCYFMRRLLKRSNTNWDIDLTRKILKTYNSIAPLTEDDFKYVFSY EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH LAFPQKYWRLSKDYYNNIKKCNKSMFVESLKEVSLDTYAQVRFVGELRTLFSTEFKIKV HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEC >Mature Secondary Structure GKHSKKFNEADEIFNAVESIVLPMYNLENYSIENIKFKNTDKNRAVYKLIDDINNPKNT CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCHH FCLKKVYYDEGTLLFIYSVMEWFARNEIKLPKMLPSKFNGRFVKANNMLFMLCPWVKGEK EEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEEECCEEEEEECCCCCCC CNFDNLQHILLSIENLAKMHNCSRNFKAIEGSLIKTGFDSLYISTLKHFNKILSSFNTAT CCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KMKHKDKFSSIFLDVFDENIYLAKEALLVSGSINDKNLSRSLCHGDYVNKNILIDNTDVW HHHHHHHHHHHHHHHHCCCEEEEEHEEEEECCCCCHHHHHHHHCCCCCCCCEEEECCEEE VIDFDKASLNYSMYDLCYFMRRLLKRSNTNWDIDLTRKILKTYNSIAPLTEDDFKYVFSY EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH LAFPQKYWRLSKDYYNNIKKCNKSMFVESLKEVSLDTYAQVRFVGELRTLFSTEFKIKV HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7545510; 9387221; 9384377 [H]