Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is cotS [H]

Identifier: 18310992

GI number: 18310992

Start: 2302395

End: 2303474

Strand: Direct

Name: cotS [H]

Synonym: CPE2010

Alternate gene names: 18310992

Gene position: 2302395-2303474 (Clockwise)

Preceding gene: 18310979

Following gene: 18311024

Centisome position: 75.95

GC content: 25.74

Gene sequence:

>1080_bases
ATGGGAAAGCATTCTAAAAAGTTTAATGAAGCTGATGAAATTTTTAATGCTGTAGAATCCATAGTTTTACCTATGTATAA
TTTAGAAAACTATTCTATAGAGAATATAAAATTTAAAAATACAGATAAAAATAGAGCTGTTTATAAATTAATTGATGATA
TTAATAATCCTAAAAATACCTTTTGCTTAAAAAAGGTTTATTATGATGAAGGGACTCTCTTATTCATATATTCAGTTATG
GAATGGTTTGCTAGAAATGAAATTAAGCTTCCAAAAATGCTCCCTTCAAAGTTTAATGGTAGATTTGTTAAAGCAAATAA
TATGCTTTTTATGCTCTGTCCATGGGTTAAAGGTGAAAAATGTAACTTCGATAACTTACAACATATCTTGCTATCCATAG
AAAATCTAGCTAAAATGCATAATTGTTCAAGAAACTTTAAAGCAATTGAAGGTAGTTTAATTAAAACTGGATTTGATAGT
CTCTACATATCCACATTAAAACACTTTAATAAGATTCTTTCATCATTTAATACTGCAACTAAAATGAAACATAAGGACAA
GTTTTCATCAATATTTTTAGATGTTTTTGATGAAAATATTTATCTAGCTAAAGAAGCTCTCTTAGTTTCAGGTTCTATTA
ATGACAAAAATTTAAGTAGATCTCTTTGCCATGGAGATTATGTAAATAAAAATATTTTAATTGATAATACTGATGTTTGG
GTAATTGATTTTGATAAAGCATCCTTAAATTATTCTATGTATGATTTATGTTATTTTATGAGACGTTTATTAAAAAGATC
AAATACTAATTGGGATATAGACTTAACAAGAAAGATACTTAAAACATATAATTCAATTGCTCCTCTTACAGAGGATGACT
TCAAATATGTTTTTTCATATCTAGCATTTCCACAAAAATATTGGCGCTTATCAAAGGACTATTATAATAACATAAAAAAA
TGTAATAAATCAATGTTTGTAGAATCTCTTAAGGAAGTTTCACTAGATACCTATGCTCAGGTTAGATTTGTTGGAGAACT
TAGAACATTGTTTTCTACTGAATTTAAAATTAAAGTTTAA

Upstream 100 bases:

>100_bases
ATTTTTTGACTTTAAATCAAAGTATTTCACATTTTAAAGTATAATCTAAAGTTAATCATAATATTCTTATAATAAGGAAT
TTTTTATTAGGAGGTTAATC

Downstream 100 bases:

>100_bases
ATAAAGGAGTATTCATAATGAATACTCCTTTATTTTATATAATCTTATTTATTATCTTTTATTTTTAACTTGTGCTTGTG
CAGCTGCAAGTCTTGCTAAT

Product: spore coat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MGKHSKKFNEADEIFNAVESIVLPMYNLENYSIENIKFKNTDKNRAVYKLIDDINNPKNTFCLKKVYYDEGTLLFIYSVM
EWFARNEIKLPKMLPSKFNGRFVKANNMLFMLCPWVKGEKCNFDNLQHILLSIENLAKMHNCSRNFKAIEGSLIKTGFDS
LYISTLKHFNKILSSFNTATKMKHKDKFSSIFLDVFDENIYLAKEALLVSGSINDKNLSRSLCHGDYVNKNILIDNTDVW
VIDFDKASLNYSMYDLCYFMRRLLKRSNTNWDIDLTRKILKTYNSIAPLTEDDFKYVFSYLAFPQKYWRLSKDYYNNIKK
CNKSMFVESLKEVSLDTYAQVRFVGELRTLFSTEFKIKV

Sequences:

>Translated_359_residues
MGKHSKKFNEADEIFNAVESIVLPMYNLENYSIENIKFKNTDKNRAVYKLIDDINNPKNTFCLKKVYYDEGTLLFIYSVM
EWFARNEIKLPKMLPSKFNGRFVKANNMLFMLCPWVKGEKCNFDNLQHILLSIENLAKMHNCSRNFKAIEGSLIKTGFDS
LYISTLKHFNKILSSFNTATKMKHKDKFSSIFLDVFDENIYLAKEALLVSGSINDKNLSRSLCHGDYVNKNILIDNTDVW
VIDFDKASLNYSMYDLCYFMRRLLKRSNTNWDIDLTRKILKTYNSIAPLTEDDFKYVFSYLAFPQKYWRLSKDYYNNIKK
CNKSMFVESLKEVSLDTYAQVRFVGELRTLFSTEFKIKV
>Mature_358_residues
GKHSKKFNEADEIFNAVESIVLPMYNLENYSIENIKFKNTDKNRAVYKLIDDINNPKNTFCLKKVYYDEGTLLFIYSVME
WFARNEIKLPKMLPSKFNGRFVKANNMLFMLCPWVKGEKCNFDNLQHILLSIENLAKMHNCSRNFKAIEGSLIKTGFDSL
YISTLKHFNKILSSFNTATKMKHKDKFSSIFLDVFDENIYLAKEALLVSGSINDKNLSRSLCHGDYVNKNILIDNTDVWV
IDFDKASLNYSMYDLCYFMRRLLKRSNTNWDIDLTRKILKTYNSIAPLTEDDFKYVFSYLAFPQKYWRLSKDYYNNIKKC
NKSMFVESLKEVSLDTYAQVRFVGELRTLFSTEFKIKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Spore wall, spore coat [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CotS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009
- InterPro:   IPR014255 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 42285; Mature: 42154

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKHSKKFNEADEIFNAVESIVLPMYNLENYSIENIKFKNTDKNRAVYKLIDDINNPKNT
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCHH
FCLKKVYYDEGTLLFIYSVMEWFARNEIKLPKMLPSKFNGRFVKANNMLFMLCPWVKGEK
EEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEEECCEEEEEECCCCCCC
CNFDNLQHILLSIENLAKMHNCSRNFKAIEGSLIKTGFDSLYISTLKHFNKILSSFNTAT
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KMKHKDKFSSIFLDVFDENIYLAKEALLVSGSINDKNLSRSLCHGDYVNKNILIDNTDVW
HHHHHHHHHHHHHHHHCCCEEEEEHEEEEECCCCCHHHHHHHHCCCCCCCCEEEECCEEE
VIDFDKASLNYSMYDLCYFMRRLLKRSNTNWDIDLTRKILKTYNSIAPLTEDDFKYVFSY
EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LAFPQKYWRLSKDYYNNIKKCNKSMFVESLKEVSLDTYAQVRFVGELRTLFSTEFKIKV
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEC
>Mature Secondary Structure 
GKHSKKFNEADEIFNAVESIVLPMYNLENYSIENIKFKNTDKNRAVYKLIDDINNPKNT
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCHH
FCLKKVYYDEGTLLFIYSVMEWFARNEIKLPKMLPSKFNGRFVKANNMLFMLCPWVKGEK
EEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEEECCEEEEEECCCCCCC
CNFDNLQHILLSIENLAKMHNCSRNFKAIEGSLIKTGFDSLYISTLKHFNKILSSFNTAT
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KMKHKDKFSSIFLDVFDENIYLAKEALLVSGSINDKNLSRSLCHGDYVNKNILIDNTDVW
HHHHHHHHHHHHHHHHCCCEEEEEHEEEEECCCCCHHHHHHHHCCCCCCCCEEEECCEEE
VIDFDKASLNYSMYDLCYFMRRLLKRSNTNWDIDLTRKILKTYNSIAPLTEDDFKYVFSY
EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LAFPQKYWRLSKDYYNNIKKCNKSMFVESLKEVSLDTYAQVRFVGELRTLFSTEFKIKV
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7545510; 9387221; 9384377 [H]