Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310988

Identifier: 18310988

GI number: 18310988

Start: 2296959

End: 2297846

Strand: Reverse

Name: 18310988

Synonym: CPE2006

Alternate gene names: NA

Gene position: 2297846-2296959 (Counterclockwise)

Preceding gene: 18310989

Following gene: 18310987

Centisome position: 75.8

GC content: 26.13

Gene sequence:

>888_bases
ATGACAAAATTTAAGGCTAGAAGAGGCCATGGCGTATTTGAAGTCTTGGCATATCTTTTATTAGGAAATGCACTATTAAT
CATATTGAATAACATAGTGAATGGTTATTTAGAGAGGAACTTAGTAATAGTATCAAGCTTTGTTTATAGCATTGTATGCA
TTTATTACATTTTACTTGATTTATCCTTAGTTTACGAAGTTAATGATGATTACATTGAAATAAATTGTTTTAAAGGATTA
AAAAAATTTAGGATAAATTTTAAAGATGTAAATGGTTTTTTAGAACAAGATAAAGTTATAAATGGATTTAAATTATCTGG
TTTTGGAAAACATAAATATTGTTTTGGTAGATGTGTTGTTCATAATGTAGGAATTGCTCGTATGTTTGTAACTTCTAGTA
AGAGGGTTATATATATACATACAGAGGATATAAGTTATGGATTATCTCCAGATGAATTTGAAAAGTTTAAAGAGTTAATA
GTATCAAAGGGAATAAAGGAAGAAAGTTTCAAGGTAAAAGTTAATAATGCAAGAGCAATAATAAGGGATAAGGGATTTTA
TATTCCTTTTATAATAACATCATTATTAATATTAGGCATTATACTAATACCTTCTATATTATATTTATCAGGAGCTATGC
CTGATAAAATGCCAATTGATTTTAGTGCACATTTCATACCTTGTACTATTGGAAGTGCGAAGGATTTTGTAGGAAGACAA
ATTATATATGGAATAATGAATATGATTCTGTTAGTATGTATTTATTATGCAAGTCATTTTTGTGCTAAATATGATAAAAA
GTTAGCTCAAAGATATATTTATTTGTCTTTAATAATATCATTGGTGTTTTTAGTTTCTCAAATACAAACACTGGTAAATT
ATTTGTAG

Upstream 100 bases:

>100_bases
TATGATTCATATAAAGTATAGAGGTAATAATAAAAGCTAAGAGCTAGTTTCTGAATAAAGCTTTATTTTATGATATAATT
ACAATGAGGTGAAGTAGTAA

Downstream 100 bases:

>100_bases
AAAGTGGGATAATATGGAGTTAAGTAAGAGATTAAAAAGAATAGCAGAACATGTTGATAAATGTGAAAGTGTAGCTGATA
TAGGTACAGATCATGGATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MTKFKARRGHGVFEVLAYLLLGNALLIILNNIVNGYLERNLVIVSSFVYSIVCIYYILLDLSLVYEVNDDYIEINCFKGL
KKFRINFKDVNGFLEQDKVINGFKLSGFGKHKYCFGRCVVHNVGIARMFVTSSKRVIYIHTEDISYGLSPDEFEKFKELI
VSKGIKEESFKVKVNNARAIIRDKGFYIPFIITSLLILGIILIPSILYLSGAMPDKMPIDFSAHFIPCTIGSAKDFVGRQ
IIYGIMNMILLVCIYYASHFCAKYDKKLAQRYIYLSLIISLVFLVSQIQTLVNYL

Sequences:

>Translated_295_residues
MTKFKARRGHGVFEVLAYLLLGNALLIILNNIVNGYLERNLVIVSSFVYSIVCIYYILLDLSLVYEVNDDYIEINCFKGL
KKFRINFKDVNGFLEQDKVINGFKLSGFGKHKYCFGRCVVHNVGIARMFVTSSKRVIYIHTEDISYGLSPDEFEKFKELI
VSKGIKEESFKVKVNNARAIIRDKGFYIPFIITSLLILGIILIPSILYLSGAMPDKMPIDFSAHFIPCTIGSAKDFVGRQ
IIYGIMNMILLVCIYYASHFCAKYDKKLAQRYIYLSLIISLVFLVSQIQTLVNYL
>Mature_294_residues
TKFKARRGHGVFEVLAYLLLGNALLIILNNIVNGYLERNLVIVSSFVYSIVCIYYILLDLSLVYEVNDDYIEINCFKGLK
KFRINFKDVNGFLEQDKVINGFKLSGFGKHKYCFGRCVVHNVGIARMFVTSSKRVIYIHTEDISYGLSPDEFEKFKELIV
SKGIKEESFKVKVNNARAIIRDKGFYIPFIITSLLILGIILIPSILYLSGAMPDKMPIDFSAHFIPCTIGSAKDFVGRQI
IYGIMNMILLVCIYYASHFCAKYDKKLAQRYIYLSLIISLVFLVSQIQTLVNYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020482
- ProDom:   PD076125 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33756; Mature: 33624

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKFKARRGHGVFEVLAYLLLGNALLIILNNIVNGYLERNLVIVSSFVYSIVCIYYILLD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LSLVYEVNDDYIEINCFKGLKKFRINFKDVNGFLEQDKVINGFKLSGFGKHKYCFGRCVV
HHHEEEECCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHH
HNVGIARMFVTSSKRVIYIHTEDISYGLSPDEFEKFKELIVSKGIKEESFKVKVNNARAI
HHCCHHHHEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCEEE
IRDKGFYIPFIITSLLILGIILIPSILYLSGAMPDKMPIDFSAHFIPCTIGSAKDFVGRQ
EECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHH
IIYGIMNMILLVCIYYASHFCAKYDKKLAQRYIYLSLIISLVFLVSQIQTLVNYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKFKARRGHGVFEVLAYLLLGNALLIILNNIVNGYLERNLVIVSSFVYSIVCIYYILLD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LSLVYEVNDDYIEINCFKGLKKFRINFKDVNGFLEQDKVINGFKLSGFGKHKYCFGRCVV
HHHEEEECCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHH
HNVGIARMFVTSSKRVIYIHTEDISYGLSPDEFEKFKELIVSKGIKEESFKVKVNNARAI
HHCCHHHHEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCEEE
IRDKGFYIPFIITSLLILGIILIPSILYLSGAMPDKMPIDFSAHFIPCTIGSAKDFVGRQ
EECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHH
IIYGIMNMILLVCIYYASHFCAKYDKKLAQRYIYLSLIISLVFLVSQIQTLVNYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11466286; 7961408 [H]