Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310931

Identifier: 18310931

GI number: 18310931

Start: 2231978

End: 2232571

Strand: Reverse

Name: 18310931

Synonym: CPE1949

Alternate gene names: NA

Gene position: 2232571-2231978 (Counterclockwise)

Preceding gene: 18310932

Following gene: 18310930

Centisome position: 73.65

GC content: 26.26

Gene sequence:

>594_bases
ATGAATTTTAATAATATAAAAAATAATGATAAAATCAAAAACTTAATATTTATTCTTTTAGGCATATTTATATTTGCAAG
CAGTTATATGATAACTTACTTTTATAATAGTAGAAAAATTCAACAAACTAATATGAAGGTTACAGAGAAAAAAGGTGAAC
TTGTTTTAGCTGAGAATATGGATGTAATATTTACAAGAAGAACTTTAGATGACCATGTTGTAGTTGATTATAAAACTACT
ATTGGAGAAATGGTTAAAAATGATGAAATCAATGGAGAAAATATGGAGGAGTTAATTTCTGCTGTAGAAAAAGATGGGTA
TAAATTAGTTTCATCAACTTCAGGAGAAATAATTTTCTTAAATGATATGGGAATATTAGAAGCTGGTAAATATTATATAG
GCGAAAAAGATGGATACATAGCAATATTTAAGGCTGGTGAAGATGGAAGACCATTTATTGAAAAGCCAGAAGATGTTAGT
ACAAAGAAGATAGAAGATTTGCCAGAGGTTGATAGAAGTAAAATAAGTAATTTTGAAAAGAAATATGATACAAGAGAAGA
GTGTGAAGAGAATATAACAAATTATATAAGCTAA

Upstream 100 bases:

>100_bases
ATGATATACTTTAATCTAATTTTGATCTTAGATATAAAAAAACATAAAATGTGTGTATAAAAAGAGAAAATATGTCAATA
ATCACCAATGAGGTGATGAT

Downstream 100 bases:

>100_bases
AAATGTAAGTGGATTTATCATTTGAAAAAATATATATAATCAATAGCTATGTCTTATTAAGATATGGCTTTTTTTATTAC
TTAAATGAAAGTATGACCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MNFNNIKNNDKIKNLIFILLGIFIFASSYMITYFYNSRKIQQTNMKVTEKKGELVLAENMDVIFTRRTLDDHVVVDYKTT
IGEMVKNDEINGENMEELISAVEKDGYKLVSSTSGEIIFLNDMGILEAGKYYIGEKDGYIAIFKAGEDGRPFIEKPEDVS
TKKIEDLPEVDRSKISNFEKKYDTREECEENITNYIS

Sequences:

>Translated_197_residues
MNFNNIKNNDKIKNLIFILLGIFIFASSYMITYFYNSRKIQQTNMKVTEKKGELVLAENMDVIFTRRTLDDHVVVDYKTT
IGEMVKNDEINGENMEELISAVEKDGYKLVSSTSGEIIFLNDMGILEAGKYYIGEKDGYIAIFKAGEDGRPFIEKPEDVS
TKKIEDLPEVDRSKISNFEKKYDTREECEENITNYIS
>Mature_197_residues
MNFNNIKNNDKIKNLIFILLGIFIFASSYMITYFYNSRKIQQTNMKVTEKKGELVLAENMDVIFTRRTLDDHVVVDYKTT
IGEMVKNDEINGENMEELISAVEKDGYKLVSSTSGEIIFLNDMGILEAGKYYIGEKDGYIAIFKAGEDGRPFIEKPEDVS
TKKIEDLPEVDRSKISNFEKKYDTREECEENITNYIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22725; Mature: 22725

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFNNIKNNDKIKNLIFILLGIFIFASSYMITYFYNSRKIQQTNMKVTEKKGELVLAENM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEECCCCEEECCCCCEEEECCC
DVIFTRRTLDDHVVVDYKTTIGEMVKNDEINGENMEELISAVEKDGYKLVSSTSGEIIFL
EEEEEECCCCCEEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEECCCCCEEEE
NDMGILEAGKYYIGEKDGYIAIFKAGEDGRPFIEKPEDVSTKKIEDLPEVDRSKISNFEK
ECCCCHHCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHH
KYDTREECEENITNYIS
HCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNFNNIKNNDKIKNLIFILLGIFIFASSYMITYFYNSRKIQQTNMKVTEKKGELVLAENM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEECCCCEEECCCCCEEEECCC
DVIFTRRTLDDHVVVDYKTTIGEMVKNDEINGENMEELISAVEKDGYKLVSSTSGEIIFL
EEEEEECCCCCEEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEECCCCCEEEE
NDMGILEAGKYYIGEKDGYIAIFKAGEDGRPFIEKPEDVSTKKIEDLPEVDRSKISNFEK
ECCCCHHCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHH
KYDTREECEENITNYIS
HCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA