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The map label for this gene is ylxY [H]

Identifier: 18310893

GI number: 18310893

Start: 2189708

End: 2190484

Strand: Reverse

Name: ylxY [H]

Synonym: CPE1911

Alternate gene names: 18310893

Gene position: 2190484-2189708 (Counterclockwise)

Preceding gene: 18310897

Following gene: 18310892

Centisome position: 72.26

GC content: 26.13

Gene sequence:

>777_bases
TTGAAAAAAAATAATAATTTTTTTATTTGTAAAAACTTTATTACTACCATTACTTTAGTTGTTATTATTGCCATATTTAC
ATTGCCTATTAATGTTTTTGCAAAAGATAATAAGCCAATTCATTGTGTGGATAGAGAGGATAAAAAAATTTCTCTTACCT
TTGATGTGAATTGGGCAGAAAATGATTATTTATGTGAAATTTTGGATTTACTAGATGAAAATAATATAAAAGCTACATTT
TTTATAATGGGTAAGTGGGTAATATATCCTGAAGGTAATAGAGAAAAGTTAGTAGAAATTCATAAGAGAGGACATGAAAT
AGGAAATCATAGTTATGTACATCCTGATTTTAAGAATATAGGAAAAGAGAGAATAATTGAAGAGGTTAAAAAAACAGAAG
AAATAATAGAAAAGGAAGTTGGAGTAAAGACTAATTTATTTAGATTTCCTAGTGGTTCATATAGCCAAGAAAGCTTAAGC
GCTATTGAAGGATTAGAATATAAAAGTATACAATGGGATGTTGATAGTGTTGATTGGAAAGGAGAGAGCAAAGAGAGAGA
GTATAAAAAGGTAATTGACAATGTAAAGAGTGGTTCAATACTTTTATATCATAATAATGGTAAATATACTGTAGAGAATC
TTAAGGAAATAATTCCAAAATTAAAATCAGAAGGATATGAATTTGTTAAAATAAGCGACATAATATATGAAAATAGTTAC
GAAATAGATGACAATGGAAAACAATTGTTAATTAAAACGAAACAAAATAATAGTTGA

Upstream 100 bases:

>100_bases
TTCCTCCATAACTGTTTTGAAATAATAATCCTATTATACCATATATGTTTTAAGATAATAAAGTTATTTGATTAATATTA
AATATTAAGGAGTGAATACT

Downstream 100 bases:

>100_bases
AATCGTTGAACAAAATGTATTATAATGGAAATAGTTATTGGATATACAGATAAATATAAAAAACATATTAAACTTATATG
ATTAAACACTAATGGGGAGA

Product: polysaccharide deacetylase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MKKNNNFFICKNFITTITLVVIIAIFTLPINVFAKDNKPIHCVDREDKKISLTFDVNWAENDYLCEILDLLDENNIKATF
FIMGKWVIYPEGNREKLVEIHKRGHEIGNHSYVHPDFKNIGKERIIEEVKKTEEIIEKEVGVKTNLFRFPSGSYSQESLS
AIEGLEYKSIQWDVDSVDWKGESKEREYKKVIDNVKSGSILLYHNNGKYTVENLKEIIPKLKSEGYEFVKISDIIYENSY
EIDDNGKQLLIKTKQNNS

Sequences:

>Translated_258_residues
MKKNNNFFICKNFITTITLVVIIAIFTLPINVFAKDNKPIHCVDREDKKISLTFDVNWAENDYLCEILDLLDENNIKATF
FIMGKWVIYPEGNREKLVEIHKRGHEIGNHSYVHPDFKNIGKERIIEEVKKTEEIIEKEVGVKTNLFRFPSGSYSQESLS
AIEGLEYKSIQWDVDSVDWKGESKEREYKKVIDNVKSGSILLYHNNGKYTVENLKEIIPKLKSEGYEFVKISDIIYENSY
EIDDNGKQLLIKTKQNNS
>Mature_258_residues
MKKNNNFFICKNFITTITLVVIIAIFTLPINVFAKDNKPIHCVDREDKKISLTFDVNWAENDYLCEILDLLDENNIKATF
FIMGKWVIYPEGNREKLVEIHKRGHEIGNHSYVHPDFKNIGKERIIEEVKKTEEIIEKEVGVKTNLFRFPSGSYSQESLS
AIEGLEYKSIQWDVDSVDWKGESKEREYKKVIDNVKSGSILLYHNNGKYTVENLKEIIPKLKSEGYEFVKISDIIYENSY
EIDDNGKQLLIKTKQNNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509
- InterPro:   IPR014228
- InterPro:   IPR010916 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 30066; Mature: 30066

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNNNFFICKNFITTITLVVIIAIFTLPINVFAKDNKPIHCVDREDKKISLTFDVNWAE
CCCCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCEEEEEEEECCCC
NDYLCEILDLLDENNIKATFFIMGKWVIYPEGNREKLVEIHKRGHEIGNHSYVHPDFKNI
CCHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCHHHHHHHHHHCCCCCCCCEECCCHHHC
GKERIIEEVKKTEEIIEKEVGVKTNLFRFPSGSYSQESLSAIEGLEYKSIQWDVDSVDWK
CHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCCCCC
GESKEREYKKVIDNVKSGSILLYHNNGKYTVENLKEIIPKLKSEGYEFVKISDIIYENSY
CCCHHHHHHHHHHCCCCCEEEEEECCCCEEHHHHHHHHHHHHHCCCEEEEEEEEEECCCE
EIDDNGKQLLIKTKQNNS
EECCCCCEEEEEECCCCC
>Mature Secondary Structure
MKKNNNFFICKNFITTITLVVIIAIFTLPINVFAKDNKPIHCVDREDKKISLTFDVNWAE
CCCCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCEEEEEEEECCCC
NDYLCEILDLLDENNIKATFFIMGKWVIYPEGNREKLVEIHKRGHEIGNHSYVHPDFKNI
CCHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCHHHHHHHHHHCCCCCCCCEECCCHHHC
GKERIIEEVKKTEEIIEKEVGVKTNLFRFPSGSYSQESLSAIEGLEYKSIQWDVDSVDWK
CHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCCCCC
GESKEREYKKVIDNVKSGSILLYHNNGKYTVENLKEIIPKLKSEGYEFVKISDIIYENSY
CCCHHHHHHHHHHCCCCCEEEEEECCCCEEHHHHHHHHHHHHHCCCEEEEEEEEEECCCE
EIDDNGKQLLIKTKQNNS
EECCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 8825779 [H]