Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is spoIIIAA [H]

Identifier: 18310815

GI number: 18310815

Start: 2107599

End: 2108483

Strand: Reverse

Name: spoIIIAA [H]

Synonym: CPE1833

Alternate gene names: 18310815

Gene position: 2108483-2107599 (Counterclockwise)

Preceding gene: 18310816

Following gene: 18310814

Centisome position: 69.55

GC content: 29.38

Gene sequence:

>885_bases
TTGAAAGAGATATTTGCTGTATTACCAGATAAGATAAATTCTTGTTTAAAAGATAAAAGTAATTTAAATAAATTACAAGA
GATTAGAGTTAAGGTTGGAAAACCTCTTAACATAGTTTTAGATAATACAGAAACAATTTTTAACTATGTAATAAGGAGAG
AGGATGTTAAAGCCATAATTCAAAAAATAAGTAACTACTCTTTATATGCCTTTGAGGAAGATATAAGGCAAGGATATATA
ACTATCCAAGGAGGGCATAGAGTTGGATTAGCAGGTCAATGCGTAATAGAAGATAATTCTATTAAAACTATTAGAAATAT
AACTTCTTTAAATATTAGAGTTTGTAGAGAAATAGTAGGCTGTTCAAATAGTTTAATGAATAGCTTGGTAGAAAATAACA
GGGTAAATAATACTTTAATAATATCTCCACCTAAATGTGGAAAAACAACACTTTTAAGAGATATTACAAGAAATATATCT
AATGGGATTTCTCAAATTGGTCTTAAGGGAAAGAGAACAGTTGTAATTGATGAAAGAAGCGAAATAGCTGCTTGTTACAA
TGGAATTCCCCAAATGAATGTAGGAATGAGAACTGATGTATATGATAACTGCATAAAAAGTGAAGGGATGATGATGGCTG
TAAGAGGGCTTTCTCCAGAAGTCATTATATGTGATGAAATTGGGACATATAAAGATATGGAAGGGTTAATGATGGCATAT
AATTCAGGAGTTAGTATTATAGCTACCTTACATGGAAGAAATGTTGAAGAATTGTATAGGAGACCTGTTTTTAGGGAGAT
TGTTGAAAATAATATAATAAATAAAGTTGTAGTTCTTAGTGGAAAAAAAGGAATTGGAACAATTGAGGGTATATATAATG
TTTAA

Upstream 100 bases:

>100_bases
GAGAAGAAGAGGACTCCAAAAAAGATTTATTATTTTAAAAATAATTAGAATAATTTCTTATGTAAAGTAATAGATTTAAA
TAGAAAGGAGAGGAGGTACT

Downstream 100 bases:

>100_bases
CATAATAAAATTATCTTTAAATTTTCTAGTAGGTTATGAAAAATAAGATATCTATTTTCAATTAGTGCTACTGAATTTAT
TAGAATGAATAAAAGGTATA

Product: stage III sporulation protein AA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MKEIFAVLPDKINSCLKDKSNLNKLQEIRVKVGKPLNIVLDNTETIFNYVIRREDVKAIIQKISNYSLYAFEEDIRQGYI
TIQGGHRVGLAGQCVIEDNSIKTIRNITSLNIRVCREIVGCSNSLMNSLVENNRVNNTLIISPPKCGKTTLLRDITRNIS
NGISQIGLKGKRTVVIDERSEIAACYNGIPQMNVGMRTDVYDNCIKSEGMMMAVRGLSPEVIICDEIGTYKDMEGLMMAY
NSGVSIIATLHGRNVEELYRRPVFREIVENNIINKVVVLSGKKGIGTIEGIYNV

Sequences:

>Translated_294_residues
MKEIFAVLPDKINSCLKDKSNLNKLQEIRVKVGKPLNIVLDNTETIFNYVIRREDVKAIIQKISNYSLYAFEEDIRQGYI
TIQGGHRVGLAGQCVIEDNSIKTIRNITSLNIRVCREIVGCSNSLMNSLVENNRVNNTLIISPPKCGKTTLLRDITRNIS
NGISQIGLKGKRTVVIDERSEIAACYNGIPQMNVGMRTDVYDNCIKSEGMMMAVRGLSPEVIICDEIGTYKDMEGLMMAY
NSGVSIIATLHGRNVEELYRRPVFREIVENNIINKVVVLSGKKGIGTIEGIYNV
>Mature_294_residues
MKEIFAVLPDKINSCLKDKSNLNKLQEIRVKVGKPLNIVLDNTETIFNYVIRREDVKAIIQKISNYSLYAFEEDIRQGYI
TIQGGHRVGLAGQCVIEDNSIKTIRNITSLNIRVCREIVGCSNSLMNSLVENNRVNNTLIISPPKCGKTTLLRDITRNIS
NGISQIGLKGKRTVVIDERSEIAACYNGIPQMNVGMRTDVYDNCIKSEGMMMAVRGLSPEVIICDEIGTYKDMEGLMMAY
NSGVSIIATLHGRNVEELYRRPVFREIVENNIINKVVVLSGKKGIGTIEGIYNV

Specific function: Unknown

COG id: COG3854

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014217 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32863; Mature: 32863

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEIFAVLPDKINSCLKDKSNLNKLQEIRVKVGKPLNIVLDNTETIFNYVIRREDVKAII
CCCHHHHCCHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHH
QKISNYSLYAFEEDIRQGYITIQGGHRVGLAGQCVIEDNSIKTIRNITSLNIRVCREIVG
HHHCCCEEEEEHHHHHCCEEEEECCCEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHC
CSNSLMNSLVENNRVNNTLIISPPKCGKTTLLRDITRNISNGISQIGLKGKRTVVIDERS
CCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCH
EIAACYNGIPQMNVGMRTDVYDNCIKSEGMMMAVRGLSPEVIICDEIGTYKDMEGLMMAY
HHHHHHCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCEEEECCCCCCHHHHHHHHHH
NSGVSIIATLHGRNVEELYRRPVFREIVENNIINKVVVLSGKKGIGTIEGIYNV
CCCCEEEEEECCCCHHHHHHCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKEIFAVLPDKINSCLKDKSNLNKLQEIRVKVGKPLNIVLDNTETIFNYVIRREDVKAII
CCCHHHHCCHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHH
QKISNYSLYAFEEDIRQGYITIQGGHRVGLAGQCVIEDNSIKTIRNITSLNIRVCREIVG
HHHCCCEEEEEHHHHHCCEEEEECCCEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHC
CSNSLMNSLVENNRVNNTLIISPPKCGKTTLLRDITRNISNGISQIGLKGKRTVVIDERS
CCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCH
EIAACYNGIPQMNVGMRTDVYDNCIKSEGMMMAVRGLSPEVIICDEIGTYKDMEGLMMAY
HHHHHHCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCEEEECCCCCCHHHHHHHHHH
NSGVSIIATLHGRNVEELYRRPVFREIVENNIINKVVVLSGKKGIGTIEGIYNV
CCCCEEEEEECCCCHHHHHHCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1766372; 8969508; 9384377 [H]