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The map label for this gene is rpmB

Identifier: 18310716

GI number: 18310716

Start: 2011513

End: 2011767

Strand: Direct

Name: rpmB

Synonym: CPE1734

Alternate gene names: 18310716

Gene position: 2011513-2011767 (Clockwise)

Preceding gene: 18310709

Following gene: 18310784

Centisome position: 66.36

GC content: 34.12

Gene sequence:

>255_bases
ATGGCAAGAAGATGCGAGATTTGTAACAAAGGAGTTGTAGCTGGAGTACAATACAGTCACTCTCACAGACAATCAAAGAG
AACTTGGGCTCCTAACATAAAAAAGGTTAAAGCAATCGTTAAAGGAACACCAAAAACTGTTCACGTTTGTACAAGATGCT
TAAGATCGGAAAAGTTCAAAGAGCTATATAAGAAATCTTTGGCTAAAATGCAGTTTAATAACTGCATTTTTATTTTGCAT
AAAAATAAGGGATAA

Upstream 100 bases:

>100_bases
AATTATTTTAATATTATACTTGCATAACTAATATATATTATGATAGAATATTATCTGTCCTATTGAAGATTTTATCTTCA
TTTTAAAGGAGGTGTTTTTA

Downstream 100 bases:

>100_bases
GTTTTACTTATCCCTTAATTTTTTCCATCTTATGTATCAGATTTCTTATTACCTTTAAACATTCTAACTATTTTAGCTAA
GAACTTTGGTAATTTAATAG

Product: 50S ribosomal protein L28

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 83

Protein sequence:

>84_residues
MARRCEICNKGVVAGVQYSHSHRQSKRTWAPNIKKVKAIVKGTPKTVHVCTRCLRSEKFKELYKKSLAKMQFNNCIFILH
KNKG

Sequences:

>Translated_84_residues
MARRCEICNKGVVAGVQYSHSHRQSKRTWAPNIKKVKAIVKGTPKTVHVCTRCLRSEKFKELYKKSLAKMQFNNCIFILH
KNKG
>Mature_83_residues
ARRCEICNKGVVAGVQYSHSHRQSKRTWAPNIKKVKAIVKGTPKTVHVCTRCLRSEKFKELYKKSLAKMQFNNCIFILHK
NKG

Specific function: Unknown

COG id: COG0227

COG function: function code J; Ribosomal protein L28

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L28P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL28_CLOPE (Q8XJM2)

Other databases:

- EMBL:   BA000016
- RefSeq:   NP_562650.1
- ProteinModelPortal:   Q8XJM2
- SMR:   Q8XJM2
- GeneID:   990044
- GenomeReviews:   BA000016_GR
- KEGG:   cpe:CPE1734
- NMPDR:   fig|195102.1.peg.1797
- HOGENOM:   HBG597003
- OMA:   TRCLRSN
- BioCyc:   CPER195102:CPE1734-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00373
- InterPro:   IPR001383
- TIGRFAMs:   TIGR00009

Pfam domain/function: PF00830 Ribosomal_L28

EC number: NA

Molecular weight: Translated: 9703; Mature: 9572

Theoretical pI: Translated: 11.06; Mature: 11.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
6.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRCEICNKGVVAGVQYSHSHRQSKRTWAPNIKKVKAIVKGTPKTVHVCTRCLRSEKFK
CCCCCCCCCCCCEECCCCCHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ELYKKSLAKMQFNNCIFILHKNKG
HHHHHHHHHHCCCCEEEEEECCCC
>Mature Secondary Structure 
ARRCEICNKGVVAGVQYSHSHRQSKRTWAPNIKKVKAIVKGTPKTVHVCTRCLRSEKFK
CCCCCCCCCCCEECCCCCHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ELYKKSLAKMQFNNCIFILHKNKG
HHHHHHHHHHCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842