| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is ackB
Identifier: 18310706
GI number: 18310706
Start: 2000425
End: 2001621
Strand: Reverse
Name: ackB
Synonym: CPE1724
Alternate gene names: 18310706
Gene position: 2001621-2000425 (Counterclockwise)
Preceding gene: 18310707
Following gene: 18310705
Centisome position: 66.03
GC content: 31.91
Gene sequence:
>1197_bases ATGAACGTATTAGTTATAAATTGCGGAAGCTCATCATTAAAATATCAATTAATAGATATGGATACTGAAAATGCTTTAGC AACTGGATTAGTAGAAAGAATAGGATTAGAAGGCGCAAACTTAACTCAAAAGAGTGAAGGTAAAGATAAATATGAAATCG TAGAGCCAATGAAAGATCATCAAGATGCTATTAGATTAGTTCTAGGAGCTTTAATAGATGAAAAACATGGTGTTATAAAA TCATTAGATGAAATAAATGCTATAGGACACAGAGTTGTTCATGGTGGAGAAAAATATGCTGAATCTGCATTAGTTACAGA GGAAGTTATGAAAGATTTAGAAGAGTGTGCTAAATTAGCTCCACTTCATAATCCTGCAAATATAATAGGAATAAATGCTT GTAAAGCATTAATGCCAAATGTTCCTATGGTTGTTGTATTTGATACAGCATTCCATCAAACAATGCCAGAAAAAGCATTC GTATATGCATTACCATATGAATTATATGAAAAAGAACACATAAGAAAATATGGTTTCCACGGAACTTCTCATAAATATGT TTCAGCTAAAATAGCAGAAGCTATGGGTAAAAACATAGAAGATTTAAAAATAATCACTTGTCACTTAGGAAATGGTGCAA GTATAGCAGCTATAAAAAATGGTAAATGTGTAGATACTACTATGGGATTCACACCACTTGAAGGTTTAGTAATGGGAACT AGATGTGGAAATATAGACCCAGCTGTAGTTACATACTTAATAGATGAATTAGGATATACTTCACAAGAAGTAAATACTTT AATGAACAAAAAATCAGGAATATTTGGAGTTTCAGGAGTAAGCAGTGACTTTAGAGATGTTGAAGCAGCTGCTGACAAAG GAAGCAAAGAAGCTCAAATAGCTTTAGATTTATTCAGAAACTCAGTTAAGAAATATATAGGAGCATACATTGCAGAGATG AATGGATGTGACGTAATAGTATTTACTGCTGGTGTTGGAGAAAACTCAATCATAGAAAGAGGAGCTATCTGTAGAGATTT AGAATTCTTAGGAATTGAGTTAGATGAAGAAAGAAACAATATAAGAGCTAAAGTTGCTGAAATAAGCAAAGAGGGTTCAA GAATTAAACTTTTCGTAGTTCCAACTAACGAAGAATTAATGATAGCACAAGATACAGTAAGTATTGTAAGTAAATAA
Upstream 100 bases:
>100_bases AACTAAATAGTAATTGATTAGAATTTTATATAGATGGATAAAATTAAAATGAATTAAGCTTATTAATTTTATATTATAAG TTTAACAGGAGGAGTTTATA
Downstream 100 bases:
>100_bases TTATAAAATACTTGACTTTTAAATATCTAGTTAATATAATAAGATATGTGTTGTTTAGGAATAAACAATGCATATCTTAT GTTAAGGAGCGTGAAAGTAG
Product: acetate kinase
Products: NA
Alternate protein names: Acetokinase 2
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MNVLVINCGSSSLKYQLIDMDTENALATGLVERIGLEGANLTQKSEGKDKYEIVEPMKDHQDAIRLVLGALIDEKHGVIK SLDEINAIGHRVVHGGEKYAESALVTEEVMKDLEECAKLAPLHNPANIIGINACKALMPNVPMVVVFDTAFHQTMPEKAF VYALPYELYEKEHIRKYGFHGTSHKYVSAKIAEAMGKNIEDLKIITCHLGNGASIAAIKNGKCVDTTMGFTPLEGLVMGT RCGNIDPAVVTYLIDELGYTSQEVNTLMNKKSGIFGVSGVSSDFRDVEAAADKGSKEAQIALDLFRNSVKKYIGAYIAEM NGCDVIVFTAGVGENSIIERGAICRDLEFLGIELDEERNNIRAKVAEISKEGSRIKLFVVPTNEELMIAQDTVSIVSK
Sequences:
>Translated_398_residues MNVLVINCGSSSLKYQLIDMDTENALATGLVERIGLEGANLTQKSEGKDKYEIVEPMKDHQDAIRLVLGALIDEKHGVIK SLDEINAIGHRVVHGGEKYAESALVTEEVMKDLEECAKLAPLHNPANIIGINACKALMPNVPMVVVFDTAFHQTMPEKAF VYALPYELYEKEHIRKYGFHGTSHKYVSAKIAEAMGKNIEDLKIITCHLGNGASIAAIKNGKCVDTTMGFTPLEGLVMGT RCGNIDPAVVTYLIDELGYTSQEVNTLMNKKSGIFGVSGVSSDFRDVEAAADKGSKEAQIALDLFRNSVKKYIGAYIAEM NGCDVIVFTAGVGENSIIERGAICRDLEFLGIELDEERNNIRAKVAEISKEGSRIKLFVVPTNEELMIAQDTVSIVSK >Mature_398_residues MNVLVINCGSSSLKYQLIDMDTENALATGLVERIGLEGANLTQKSEGKDKYEIVEPMKDHQDAIRLVLGALIDEKHGVIK SLDEINAIGHRVVHGGEKYAESALVTEEVMKDLEECAKLAPLHNPANIIGINACKALMPNVPMVVVFDTAFHQTMPEKAF VYALPYELYEKEHIRKYGFHGTSHKYVSAKIAEAMGKNIEDLKIITCHLGNGASIAAIKNGKCVDTTMGFTPLEGLVMGT RCGNIDPAVVTYLIDELGYTSQEVNTLMNKKSGIFGVSGVSSDFRDVEAAADKGSKEAQIALDLFRNSVKKYIGAYIAEM NGCDVIVFTAGVGENSIIERGAICRDLEFLGIELDEERNNIRAKVAEISKEGSRIKLFVVPTNEELMIAQDTVSIVSK
Specific function: Involved In The Activation Of Acetate To Acetyl CoA And The Secretion Of Acetate. During Anaerobic Growth Of The Organism, This Enzyme Is Also Involved In The Synthesis Of Most Of The ATP Formed Catabolically. [C]
COG id: COG0282
COG function: function code C; Acetate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetokinase family
Homologues:
Organism=Escherichia coli, GI1788633, Length=402, Percent_Identity=46.5174129353234, Blast_Score=351, Evalue=5e-98, Organism=Escherichia coli, GI145693184, Length=395, Percent_Identity=40.7594936708861, Blast_Score=312, Evalue=3e-86,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): ACKA2_CLOPE (Q8XJN2)
Other databases:
- EMBL: BA000016 - RefSeq: NP_562640.1 - ProteinModelPortal: Q8XJN2 - SMR: Q8XJN2 - GeneID: 990034 - GenomeReviews: BA000016_GR - KEGG: cpe:CPE1724 - NMPDR: fig|195102.1.peg.1787 - HOGENOM: HBG285863 - OMA: SSDFRDV - PhylomeDB: Q8XJN2 - ProtClustDB: PRK00180 - BioCyc: CPER195102:CPE1724-MONOMER - BRENDA: 2.7.2.1 - GO: GO:0005737 - HAMAP: MF_00020 - InterPro: IPR000890 - InterPro: IPR004372 - PANTHER: PTHR21060 - PANTHER: PTHR21060:SF11 - PIRSF: PIRSF000722 - PRINTS: PR00471 - TIGRFAMs: TIGR00016
Pfam domain/function: PF00871 Acetate_kinase
EC number: =2.7.2.1
Molecular weight: Translated: 43418; Mature: 43418
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS01075 ACETATE_KINASE_1; PS01076 ACETATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVLVINCGSSSLKYQLIDMDTENALATGLVERIGLEGANLTQKSEGKDKYEIVEPMKDH CEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH QDAIRLVLGALIDEKHGVIKSLDEINAIGHRVVHGGEKYAESALVTEEVMKDLEECAKLA HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC PLHNPANIIGINACKALMPNVPMVVVFDTAFHQTMPEKAFVYALPYELYEKEHIRKYGFH CCCCCCCEEEHHHHHHHCCCCCEEEEEECHHHHCCCCCEEEEECCHHHHHHHHHHHHCCC GTSHKYVSAKIAEAMGKNIEDLKIITCHLGNGASIAAIKNGKCVDTTMGFTPLEGLVMGT CCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCEEEECCCCCCCCCCEEEEC RCGNIDPAVVTYLIDELGYTSQEVNTLMNKKSGIFGVSGVSSDFRDVEAAADKGSKEAQI CCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCHHHH ALDLFRNSVKKYIGAYIAEMNGCDVIVFTAGVGENSIIERGAICRDLEFLGIELDEERNN HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCHHHCHHEECEEECCCCCH IRAKVAEISKEGSRIKLFVVPTNEELMIAQDTVSIVSK HHHHHHHHHCCCCEEEEEEEECCCCEEEEEHHHHHHCC >Mature Secondary Structure MNVLVINCGSSSLKYQLIDMDTENALATGLVERIGLEGANLTQKSEGKDKYEIVEPMKDH CEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH QDAIRLVLGALIDEKHGVIKSLDEINAIGHRVVHGGEKYAESALVTEEVMKDLEECAKLA HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC PLHNPANIIGINACKALMPNVPMVVVFDTAFHQTMPEKAFVYALPYELYEKEHIRKYGFH CCCCCCCEEEHHHHHHHCCCCCEEEEEECHHHHCCCCCEEEEECCHHHHHHHHHHHHCCC GTSHKYVSAKIAEAMGKNIEDLKIITCHLGNGASIAAIKNGKCVDTTMGFTPLEGLVMGT CCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCEEEECCCCCCCCCCEEEEC RCGNIDPAVVTYLIDELGYTSQEVNTLMNKKSGIFGVSGVSSDFRDVEAAADKGSKEAQI CCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCHHHH ALDLFRNSVKKYIGAYIAEMNGCDVIVFTAGVGENSIIERGAICRDLEFLGIELDEERNN HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCHHHCHHEECEEECCCCCH IRAKVAEISKEGSRIKLFVVPTNEELMIAQDTVSIVSK HHHHHHHHHCCCCEEEEEEEECCCCEEEEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11792842