Click here to switch to the map view.

The map label for this gene is ftsY [H]

Identifier: 18310697

GI number: 18310697

Start: 1991673

End: 1992587

Strand: Reverse

Name: ftsY [H]

Synonym: CPE1715

Alternate gene names: 18310697

Gene position: 1992587-1991673 (Counterclockwise)

Preceding gene: 18310698

Following gene: 18310696

Centisome position: 65.73

GC content: 31.04

Gene sequence:

>915_bases
ATGTTTGGAAAATTATTTGATAAATTAAAAACTGGATTAACAAAAACAAGAGATAACTTAACAGATAAAATAAATGAGGC
TTTAAATTTAGCTGTAACTATAGACGATGATATGTATGAGGAGCTTGAAGAAGCACTTATAATGTCAGATATAGGAATGG
ATACTACTATTGAAATAATTGATAGATTAAAAGCTAAAATAAGAAAAGAAAAAATAAATGATGTTGAAATGGTTAAACCA
GCCTTAAAAGAAGTTATTGCAGAAATGATGTTAGAAGGAGACTATGAAGAGGAAGAAGAGGATAACGAAAAGAAAGTTAT
GCTTATAATAGGGGTTAACGGAGTAGGTAAGACTACTTCAATAGGTAAGATAGCTGCTAGAAATAAAAATAATGGTAAAA
AAGTTCTATTAGCCGCTGCAGATACCTTTAGAGCAGCTGCCATAGATCAATTAGATATATGGAGTCAAAGAGCTAATGTA
GATATAGTTAAGCATCAAGAAGGATCAGATCCTGCAGCAGTAGTTTTTGATGCCGTACAGGCTGCTAAAGCTAGGGATGT
AGATTTATTAATATGTGATACGGCAGGAAGACTTCATAACAAGAAAAATCTTATGGATGAGTTAGCTAAAATAAATAGAA
TAATAGATAGAGAATTAGGAGATAGAAAAAAAGAAACTCTTCTAGTATTAGATGGTACAACAGGACAAAATGCAGTTATA
CAAGCAAAACAATTTATGGAGGCTTGTCCTATTGACGGAATAATATTAACTAAGTTAGATGGAACAGCTAAGGGTGGAGT
TGTTATATCTATTAAAAACACTTTAAATATACCAGTTAAATATATTGGTGTTGGAGAAGGTGTAGAGGATTTACAAAAAT
TCAATGCTAAGGAATTTGCAGAAGCATTATTATAA

Upstream 100 bases:

>100_bases
ACTATGGAAGCTGCTGATGTTATGTATGGAGTTACTATGGAAGAGAAAGGTATATCTAAAATTGTTTCAGTAGACTTGGA
CAAATAGAGGAGGACAAAAA

Downstream 100 bases:

>100_bases
GAAAAAAGTAAAAAAAATATTTAGAAAAATTATTAATCATAAATGAATACATAGTAATTCATATAAGTAATCATCAGGTT
TTTAAGCATAAATATCAAAA

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MFGKLFDKLKTGLTKTRDNLTDKINEALNLAVTIDDDMYEELEEALIMSDIGMDTTIEIIDRLKAKIRKEKINDVEMVKP
ALKEVIAEMMLEGDYEEEEEDNEKKVMLIIGVNGVGKTTSIGKIAARNKNNGKKVLLAAADTFRAAAIDQLDIWSQRANV
DIVKHQEGSDPAAVVFDAVQAAKARDVDLLICDTAGRLHNKKNLMDELAKINRIIDRELGDRKKETLLVLDGTTGQNAVI
QAKQFMEACPIDGIILTKLDGTAKGGVVISIKNTLNIPVKYIGVGEGVEDLQKFNAKEFAEALL

Sequences:

>Translated_304_residues
MFGKLFDKLKTGLTKTRDNLTDKINEALNLAVTIDDDMYEELEEALIMSDIGMDTTIEIIDRLKAKIRKEKINDVEMVKP
ALKEVIAEMMLEGDYEEEEEDNEKKVMLIIGVNGVGKTTSIGKIAARNKNNGKKVLLAAADTFRAAAIDQLDIWSQRANV
DIVKHQEGSDPAAVVFDAVQAAKARDVDLLICDTAGRLHNKKNLMDELAKINRIIDRELGDRKKETLLVLDGTTGQNAVI
QAKQFMEACPIDGIILTKLDGTAKGGVVISIKNTLNIPVKYIGVGEGVEDLQKFNAKEFAEALL
>Mature_304_residues
MFGKLFDKLKTGLTKTRDNLTDKINEALNLAVTIDDDMYEELEEALIMSDIGMDTTIEIIDRLKAKIRKEKINDVEMVKP
ALKEVIAEMMLEGDYEEEEEDNEKKVMLIIGVNGVGKTTSIGKIAARNKNNGKKVLLAAADTFRAAAIDQLDIWSQRANV
DIVKHQEGSDPAAVVFDAVQAAKARDVDLLICDTAGRLHNKKNLMDELAKINRIIDRELGDRKKETLLVLDGTTGQNAVI
QAKQFMEACPIDGIILTKLDGTAKGGVVISIKNTLNIPVKYIGVGEGVEDLQKFNAKEFAEALL

Specific function: Required for normal cell growth and morphogenesis; translocation of at least 1 protein is impaired in its absence [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=271, Percent_Identity=28.0442804428044, Blast_Score=122, Evalue=3e-28,
Organism=Homo sapiens, GI226371618, Length=233, Percent_Identity=29.1845493562232, Blast_Score=118, Evalue=5e-27,
Organism=Homo sapiens, GI23308697, Length=303, Percent_Identity=29.042904290429, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI295424842, Length=303, Percent_Identity=29.042904290429, Blast_Score=112, Evalue=6e-25,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=30.3703703703704, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI1789874, Length=300, Percent_Identity=48.6666666666667, Blast_Score=268, Evalue=2e-73,
Organism=Escherichia coli, GI1788963, Length=305, Percent_Identity=36.7213114754098, Blast_Score=169, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI17539958, Length=273, Percent_Identity=28.2051282051282, Blast_Score=121, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI193206261, Length=298, Percent_Identity=30.2013422818792, Blast_Score=119, Evalue=3e-27,
Organism=Saccharomyces cerevisiae, GI6325345, Length=309, Percent_Identity=32.3624595469256, Blast_Score=150, Evalue=2e-37,
Organism=Saccharomyces cerevisiae, GI6320498, Length=262, Percent_Identity=26.7175572519084, Blast_Score=86, Evalue=6e-18,
Organism=Drosophila melanogaster, GI17647949, Length=287, Percent_Identity=27.8745644599303, Blast_Score=123, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24641198, Length=300, Percent_Identity=26, Blast_Score=103, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 33512; Mature: 33512

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGKLFDKLKTGLTKTRDNLTDKINEALNLAVTIDDDMYEELEEALIMSDIGMDTTIEII
CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHCCCCHHHHHH
DRLKAKIRKEKINDVEMVKPALKEVIAEMMLEGDYEEEEEDNEKKVMLIIGVNGVGKTTS
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCC
IGKIAARNKNNGKKVLLAAADTFRAAAIDQLDIWSQRANVDIVKHQEGSDPAAVVFDAVQ
CCHHEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHH
AAKARDVDLLICDTAGRLHNKKNLMDELAKINRIIDRELGDRKKETLLVLDGTTGQNAVI
HHCCCCCEEEEECCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHH
QAKQFMEACPIDGIILTKLDGTAKGGVVISIKNTLNIPVKYIGVGEGVEDLQKFNAKEFA
HHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHCCHHHHH
EALL
HHHC
>Mature Secondary Structure
MFGKLFDKLKTGLTKTRDNLTDKINEALNLAVTIDDDMYEELEEALIMSDIGMDTTIEII
CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHCCCCHHHHHH
DRLKAKIRKEKINDVEMVKPALKEVIAEMMLEGDYEEEEEDNEKKVMLIIGVNGVGKTTS
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCC
IGKIAARNKNNGKKVLLAAADTFRAAAIDQLDIWSQRANVDIVKHQEGSDPAAVVFDAVQ
CCHHEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHH
AAKARDVDLLICDTAGRLHNKKNLMDELAKINRIIDRELGDRKKETLLVLDGTTGQNAVI
HHCCCCCEEEEECCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHH
QAKQFMEACPIDGIILTKLDGTAKGGVVISIKNTLNIPVKYIGVGEGVEDLQKFNAKEFA
HHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHCCHHHHH
EALL
HHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584053; 9384377; 8654983 [H]