Click here to switch to the map view.

The map label for this gene is ylxR [H]

Identifier: 18310670

GI number: 18310670

Start: 1964292

End: 1964558

Strand: Reverse

Name: ylxR [H]

Synonym: CPE1688

Alternate gene names: 18310670

Gene position: 1964558-1964292 (Counterclockwise)

Preceding gene: 18310671

Following gene: 18310669

Centisome position: 64.81

GC content: 29.96

Gene sequence:

>267_bases
ATGAAACCTAAAAAAATTCCAATGAGAATGTGTAATGGTTGCATGGAAATGAAGCCTAAAAAAGAACTGATAAGAATAGT
TAAAAATGCTGAAGGAGAAGTTTCTGTAGATTTAACTGGTAAAAAGTCAGGAAGAGGGGCTTACATTTGTAAAAGTGTTG
AATGTTTAGAAAAAGCATTTAAAGCAAAAAGATTAAATAAAAATCTTCAATCTAACATTGGAGATGAAGTCTATGATAGA
TTGAGGGATGAGATAACAAATGGATAA

Upstream 100 bases:

>100_bases
CAAATCTAAAGCAGAAGAATTATTACAAGAAGAAGATATTGTTGTTGAAGAAGACACTATAATAGAAGAATAATAACTTC
TAGACTTTGGAGGTGACAAG

Downstream 100 bases:

>100_bases
ATTTCTTAATTTTTTAGGACTTACAAAAAGAGCAGGTAAACTTTTGGAAGGTTATAATAAATGTGAAGAGGAAATGAAAA
GAAGTAAAATCTACTTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MKPKKIPMRMCNGCMEMKPKKELIRIVKNAEGEVSVDLTGKKSGRGAYICKSVECLEKAFKAKRLNKNLQSNIGDEVYDR
LRDEITNG

Sequences:

>Translated_88_residues
MKPKKIPMRMCNGCMEMKPKKELIRIVKNAEGEVSVDLTGKKSGRGAYICKSVECLEKAFKAKRLNKNLQSNIGDEVYDR
LRDEITNG
>Mature_88_residues
MKPKKIPMRMCNGCMEMKPKKELIRIVKNAEGEVSVDLTGKKSGRGAYICKSVECLEKAFKAKRLNKNLQSNIGDEVYDR
LRDEITNG

Specific function: Unknown

COG id: COG2740

COG function: function code K; Predicted nucleic-acid-binding protein implicated in transcription termination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007393 [H]

Pfam domain/function: PF04296 DUF448 [H]

EC number: NA

Molecular weight: Translated: 9977; Mature: 9977

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
10.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPKKIPMRMCNGCMEMKPKKELIRIVKNAEGEVSVDLTGKKSGRGAYICKSVECLEKAF
CCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
KAKRLNKNLQSNIGDEVYDRLRDEITNG
HHHHHHHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKPKKIPMRMCNGCMEMKPKKELIRIVKNAEGEVSVDLTGKKSGRGAYICKSVECLEKAF
CCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
KAKRLNKNLQSNIGDEVYDRLRDEITNG
HHHHHHHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8491709; 9384377 [H]