Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310638

Identifier: 18310638

GI number: 18310638

Start: 1927598

End: 1929343

Strand: Reverse

Name: 18310638

Synonym: CPE1656

Alternate gene names: NA

Gene position: 1929343-1927598 (Counterclockwise)

Preceding gene: 18310640

Following gene: 18310635

Centisome position: 63.64

GC content: 29.61

Gene sequence:

>1746_bases
ATGAGAAAAGAATTTTGCTTAAAGCATGGAAAAGTAACTATGAACTTTACTGCAAAGTATTGTGATAGTTTTGAATCCAT
AATAAATAGCGAAGGGTTTAGAAAAGTTTTAGAAACTTATTTGAAAAAAACTAAAAATAAGAAGAGTCATAATTTTAGAT
TCTTAAGTGAAGCCATAGGTACTGAAGATATAAAGGTTATATCTAGGTACTTAATAAGTACATTAAAACTATTATCTATG
ATGGGGGCTGATGAGGTACTAGTTGTTAATGATGCTTTTGAAGGTTTACTTGAGGATAAGAAATCTTTTGCTAATATTAT
AGATGATGTTTATTCATTCTGGAGAAAGTTAGAAAGATACACTGTTATCCAAAATAATAAAGTAAAAGATGGTATTGCAG
CAGTTGGATTTGTAGATGCTAATAAAAGTTTTAATGATTTAATTTTAAGATTTTATAGAAGACTTCAAAAGAATCTATTA
GGAAGTATGCCTAACATACTTAGACAGGTTTCTGCTGGTGGAAATGCAAGTATTATGGTAAGTAATTTAATATGGCCAAG
TCCAAGAGAATATTCCATACTAGATCATATTCCATTTATAGATGCAATATCCTTAGAAGCACCATTTATAACTTATCCAA
GTAAGAATACTAGGGATGGTATATTCTTAGAAACAAGTGAAAATCCCTTAAGTGGATCTCATATAAATAGTGAAGAATGG
TTTTGTTATCCTGCTAAGGTAGGGGAATTATTAGCATATGTATATTTTCATAGAGATTTTATGTCTCATGGAATAAGTTT
ATGTAATTTGTTTGATTTAGCAACTGTAGAGGAATGTAGAGGGGTAAAACCAGATATTATTTATGTTTTCGGAGCTAAGG
ATGATGATGATGAATTAAAAACTTGTTTCTATGATGATGAGAAAAATAATATAATGCTAGGGTATGCTAATTATAGTGAA
GAAATAGATTACTTTGGATATATGAAAAAAATGATATTAACTCTTCACAATATAATAATGATAAAAAGAGGATATATGCC
TATTCATGGAGCTATGGTCAACGTGGTTCTTAAAAATGGAAAAGAAGCTAATATTGTAATAATGGGTGATAGTGGAGCAG
GAAAATCTGAAAGTTTAGAAGCCTTTAGAGCCTTGAGTGAAGAATATATAAGCGATATGACCATAATTTTTGATGACATG
GGTGTATTTAAAAATGTAGATGGCATAATTAAGGGGTATGGAACTGAAATAGGAGCCTTTGTAAGACTTGATGACTTAGA
TCAAGGGTATGCTTTTAAGGAAATTGATAGAAGTATATTTATGAATCCTGATAAGATAAATGCTAGACTTCTTATGCCAG
TATGTAAGTATGACGATATAATAAGGGGATATGATGTAGATCTTTTCCTTTATGCTAATAATTATGATGGAGTAGATGAG
GGAGAAAAATCTATTGAATATTTTAATAATCCAGAGGAAGCTAAGAAAATTTTTAAAGCTGGTGCTAGAATGGCAAAGGG
AACAACTACTGAAAATGGCTTAGTGGAATCATATTTTGCTAATCCTTTTGGACCAGTGCAAAAGAAAGAAGAAATGGATT
TAATAATAGATAAATATTTTGAAGATATGTTTAATAATAAAGTGAAGGTTGGACAAATAAAAACTTGTTTAGGAGTTTTA
GGTTTTGAAAAGGAAGGACCTAAAAAAGCAGCCATAGAACTTTTTGATATAATTGAAAAAATGTAA

Upstream 100 bases:

>100_bases
TAAATAATGAAAGATTTTGGAAAGATACAACTTTAGTGATATAATTAAATTGGAGATATTCATCTTTAAACTTGTAAAAA
CTAAAAAAGGGGGCTTAATA

Downstream 100 bases:

>100_bases
AAGCTAAATCCCTATTAGAGATTTCTAATAGGGATTTAGCTTTATTTTTATTCTTTTATACGATTGAAATAACCGTAGAA
TGATAAGCAGTATAATCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 581; Mature: 581

Protein sequence:

>581_residues
MRKEFCLKHGKVTMNFTAKYCDSFESIINSEGFRKVLETYLKKTKNKKSHNFRFLSEAIGTEDIKVISRYLISTLKLLSM
MGADEVLVVNDAFEGLLEDKKSFANIIDDVYSFWRKLERYTVIQNNKVKDGIAAVGFVDANKSFNDLILRFYRRLQKNLL
GSMPNILRQVSAGGNASIMVSNLIWPSPREYSILDHIPFIDAISLEAPFITYPSKNTRDGIFLETSENPLSGSHINSEEW
FCYPAKVGELLAYVYFHRDFMSHGISLCNLFDLATVEECRGVKPDIIYVFGAKDDDDELKTCFYDDEKNNIMLGYANYSE
EIDYFGYMKKMILTLHNIIMIKRGYMPIHGAMVNVVLKNGKEANIVIMGDSGAGKSESLEAFRALSEEYISDMTIIFDDM
GVFKNVDGIIKGYGTEIGAFVRLDDLDQGYAFKEIDRSIFMNPDKINARLLMPVCKYDDIIRGYDVDLFLYANNYDGVDE
GEKSIEYFNNPEEAKKIFKAGARMAKGTTTENGLVESYFANPFGPVQKKEEMDLIIDKYFEDMFNNKVKVGQIKTCLGVL
GFEKEGPKKAAIELFDIIEKM

Sequences:

>Translated_581_residues
MRKEFCLKHGKVTMNFTAKYCDSFESIINSEGFRKVLETYLKKTKNKKSHNFRFLSEAIGTEDIKVISRYLISTLKLLSM
MGADEVLVVNDAFEGLLEDKKSFANIIDDVYSFWRKLERYTVIQNNKVKDGIAAVGFVDANKSFNDLILRFYRRLQKNLL
GSMPNILRQVSAGGNASIMVSNLIWPSPREYSILDHIPFIDAISLEAPFITYPSKNTRDGIFLETSENPLSGSHINSEEW
FCYPAKVGELLAYVYFHRDFMSHGISLCNLFDLATVEECRGVKPDIIYVFGAKDDDDELKTCFYDDEKNNIMLGYANYSE
EIDYFGYMKKMILTLHNIIMIKRGYMPIHGAMVNVVLKNGKEANIVIMGDSGAGKSESLEAFRALSEEYISDMTIIFDDM
GVFKNVDGIIKGYGTEIGAFVRLDDLDQGYAFKEIDRSIFMNPDKINARLLMPVCKYDDIIRGYDVDLFLYANNYDGVDE
GEKSIEYFNNPEEAKKIFKAGARMAKGTTTENGLVESYFANPFGPVQKKEEMDLIIDKYFEDMFNNKVKVGQIKTCLGVL
GFEKEGPKKAAIELFDIIEKM
>Mature_581_residues
MRKEFCLKHGKVTMNFTAKYCDSFESIINSEGFRKVLETYLKKTKNKKSHNFRFLSEAIGTEDIKVISRYLISTLKLLSM
MGADEVLVVNDAFEGLLEDKKSFANIIDDVYSFWRKLERYTVIQNNKVKDGIAAVGFVDANKSFNDLILRFYRRLQKNLL
GSMPNILRQVSAGGNASIMVSNLIWPSPREYSILDHIPFIDAISLEAPFITYPSKNTRDGIFLETSENPLSGSHINSEEW
FCYPAKVGELLAYVYFHRDFMSHGISLCNLFDLATVEECRGVKPDIIYVFGAKDDDDELKTCFYDDEKNNIMLGYANYSE
EIDYFGYMKKMILTLHNIIMIKRGYMPIHGAMVNVVLKNGKEANIVIMGDSGAGKSESLEAFRALSEEYISDMTIIFDDM
GVFKNVDGIIKGYGTEIGAFVRLDDLDQGYAFKEIDRSIFMNPDKINARLLMPVCKYDDIIRGYDVDLFLYANNYDGVDE
GEKSIEYFNNPEEAKKIFKAGARMAKGTTTENGLVESYFANPFGPVQKKEEMDLIIDKYFEDMFNNKVKVGQIKTCLGVL
GFEKEGPKKAAIELFDIIEKM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66205; Mature: 66205

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKEFCLKHGKVTMNFTAKYCDSFESIINSEGFRKVLETYLKKTKNKKSHNFRFLSEAIG
CCCHHHHHCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
TEDIKVISRYLISTLKLLSMMGADEVLVVNDAFEGLLEDKKSFANIIDDVYSFWRKLERY
CHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
TVIQNNKVKDGIAAVGFVDANKSFNDLILRFYRRLQKNLLGSMPNILRQVSAGGNASIMV
EEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEE
SNLIWPSPREYSILDHIPFIDAISLEAPFITYPSKNTRDGIFLETSENPLSGSHINSEEW
EECCCCCCCCCCHHHCCCCCCEEECCCCEEECCCCCCCCCEEEECCCCCCCCCCCCCCCC
FCYPAKVGELLAYVYFHRDFMSHGISLCNLFDLATVEECRGVKPDIIYVFGAKDDDDELK
EEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHH
TCFYDDEKNNIMLGYANYSEEIDYFGYMKKMILTLHNIIMIKRGYMPIHGAMVNVVLKNG
HEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEECC
KEANIVIMGDSGAGKSESLEAFRALSEEYISDMTIIFDDMGVFKNVDGIIKGYGTEIGAF
CCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHCCCHHHHHCCCCCEEE
VRLDDLDQGYAFKEIDRSIFMNPDKINARLLMPVCKYDDIIRGYDVDLFLYANNYDGVDE
EEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHCCCCEEEEEEECCCCCCCC
GEKSIEYFNNPEEAKKIFKAGARMAKGTTTENGLVESYFANPFGPVQKKEEMDLIIDKYF
CHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHH
EDMFNNKVKVGQIKTCLGVLGFEKEGPKKAAIELFDIIEKM
HHHHCCCEEECHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKEFCLKHGKVTMNFTAKYCDSFESIINSEGFRKVLETYLKKTKNKKSHNFRFLSEAIG
CCCHHHHHCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
TEDIKVISRYLISTLKLLSMMGADEVLVVNDAFEGLLEDKKSFANIIDDVYSFWRKLERY
CHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
TVIQNNKVKDGIAAVGFVDANKSFNDLILRFYRRLQKNLLGSMPNILRQVSAGGNASIMV
EEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEE
SNLIWPSPREYSILDHIPFIDAISLEAPFITYPSKNTRDGIFLETSENPLSGSHINSEEW
EECCCCCCCCCCHHHCCCCCCEEECCCCEEECCCCCCCCCEEEECCCCCCCCCCCCCCCC
FCYPAKVGELLAYVYFHRDFMSHGISLCNLFDLATVEECRGVKPDIIYVFGAKDDDDELK
EEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHH
TCFYDDEKNNIMLGYANYSEEIDYFGYMKKMILTLHNIIMIKRGYMPIHGAMVNVVLKNG
HEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEECC
KEANIVIMGDSGAGKSESLEAFRALSEEYISDMTIIFDDMGVFKNVDGIIKGYGTEIGAF
CCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHCCCHHHHHCCCCCEEE
VRLDDLDQGYAFKEIDRSIFMNPDKINARLLMPVCKYDDIIRGYDVDLFLYANNYDGVDE
EEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHCCCCEEEEEEECCCCCCCC
GEKSIEYFNNPEEAKKIFKAGARMAKGTTTENGLVESYFANPFGPVQKKEEMDLIIDKYF
CHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHH
EDMFNNKVKVGQIKTCLGVLGFEKEGPKKAAIELFDIIEKM
HHHHCCCEEECHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA