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The map label for this gene is ntpF

Identifier: 18310621

GI number: 18310621

Start: 1912234

End: 1912551

Strand: Reverse

Name: ntpF

Synonym: CPE1639

Alternate gene names: 18310621

Gene position: 1912551-1912234 (Counterclockwise)

Preceding gene: 18310622

Following gene: 18310620

Centisome position: 63.09

GC content: 32.7

Gene sequence:

>318_bases
ATGGATATGTATAAGAAAATAGGAGTTGTAGGTGATAAAGATTCAGTTTTAGCTTTCAAAGCTCTTGGAATAGATGTTTT
CCCTGTAGTTGAAGATGAAGAAGCTAGAAAAACAATTGATAAGCTTGCAATGACAGGTTATGCAGTAATCTTTGTTACAG
AGCACGTAGCTAAGAATATAGAAGAAACTATCGAGAGATATACAAGACAAGTACTTCCTGCTGTAATATTAATTCCAAGC
AATCAAGGAACTCTAAATATAGGAAAACAAAGAATATCAGATAACGTTGAAAAAGCAGTTGGCGTTAACATTTTATAG

Upstream 100 bases:

>100_bases
TATATGTATGTTAAAGAGAATGAAATAAAGCAAATAAGAACTATCATGGTTGGTAAATTAAACAATATTACTAAGGAAGT
AATAAGAGAAAGGCTGCGTG

Downstream 100 bases:

>100_bases
AAAGTAGGTAGATAACTTGAAAACGGGGAAAATTATCAAGGTTTCAGGTCCTTTAGTAGTTGCTGAAGGTATGGATGAAG
CTAATGTATATGACGTTGTA

Product: V-type ATP synthase subunit F

Products: ADP; phosphate; H+

Alternate protein names: V-ATPase subunit F

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MDMYKKIGVVGDKDSVLAFKALGIDVFPVVEDEEARKTIDKLAMTGYAVIFVTEHVAKNIEETIERYTRQVLPAVILIPS
NQGTLNIGKQRISDNVEKAVGVNIL

Sequences:

>Translated_105_residues
MDMYKKIGVVGDKDSVLAFKALGIDVFPVVEDEEARKTIDKLAMTGYAVIFVTEHVAKNIEETIERYTRQVLPAVILIPS
NQGTLNIGKQRISDNVEKAVGVNIL
>Mature_105_residues
MDMYKKIGVVGDKDSVLAFKALGIDVFPVVEDEEARKTIDKLAMTGYAVIFVTEHVAKNIEETIERYTRQVLPAVILIPS
NQGTLNIGKQRISDNVEKAVGVNIL

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG1436

COG function: function code C; Archaeal/vacuolar-type H+-ATPase subunit F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the V-ATPase F subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): VATF_CLOPE (Q8XJW4)

Other databases:

- EMBL:   BA000016
- RefSeq:   NP_562555.1
- ProteinModelPortal:   Q8XJW4
- SMR:   Q8XJW4
- GeneID:   989949
- GenomeReviews:   BA000016_GR
- KEGG:   cpe:CPE1639
- NMPDR:   fig|195102.1.peg.1702
- HOGENOM:   HBG402579
- OMA:   GVIFITE
- ProtClustDB:   PRK01395
- BioCyc:   CPER195102:CPE1639-MONOMER
- BRENDA:   3.6.3.14
- HAMAP:   MF_00312
- InterPro:   IPR022944
- InterPro:   IPR008218

Pfam domain/function: PF01990 ATP-synt_F

EC number: 3.6.3.14

Molecular weight: Translated: 11604; Mature: 11604

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMYKKIGVVGDKDSVLAFKALGIDVFPVVEDEEARKTIDKLAMTGYAVIFVTEHVAKNI
CCCHHHCCCCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHH
EETIERYTRQVLPAVILIPSNQGTLNIGKQRISDNVEKAVGVNIL
HHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDMYKKIGVVGDKDSVLAFKALGIDVFPVVEDEEARKTIDKLAMTGYAVIFVTEHVAKNI
CCCHHHCCCCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHH
EETIERYTRQVLPAVILIPSNQGTLNIGKQRISDNVEKAVGVNIL
HHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842