| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is cah [H]
Identifier: 18310578
GI number: 18310578
Start: 1869559
End: 1870518
Strand: Reverse
Name: cah [H]
Synonym: CPE1596
Alternate gene names: 18310578
Gene position: 1870518-1869559 (Counterclockwise)
Preceding gene: 18310580
Following gene: 18310577
Centisome position: 61.7
GC content: 31.25
Gene sequence:
>960_bases ATGGCAATCTTGGATATGTCTTTGGAAAAACTTTATGAATACAGAGGGATTAGCCCACTGCCAGAAGATTTTGATGAATT TTGGGATTCTGAGTTAAGGGAATTAGCTAATTTAGACATTAAATTAGAATTAAAAAAAGCTGACTTTGAAAGTCCTATAG CAGAATGTTATGATTTGTATTTTAATGGTATTAATGGAGCTAGAATATATGCAAAATTTATGAAACCTAAAGAAGTTAAA AGGAAAATGCCAGCTTTGTTAGAGTTTCATGGATATGAAGAGAGAAGCAATGACTGGAGTAATAATCTTCACTATGTAGC TAGTGGAATGTGTGTTGCAGTTATGGAGTGTAGAGGGCAAGATTACTTGAAAGAAGATTCTTGTAAGTTTAAATCTTTTA AGTCAAAAGGACATATAGTTAGAGGATTAGTTGAAGGTAGAGAAAAATTGTTATTTAAGAATATATTTTTAGATACTGCT ATTTTAGCTAGAATAGTAATGAATATGGAATGGGTAGATGAGGAAAGAGTTTTTGCAACTGGCGGTTCCCAAGGAGGAGC CTTAGCTTTGGCCTGTGCAGCCTTAGAAAATAGAATAAAAGGTGTTTATGCTTATTATCCATTTTTATGTGATTACAAAA GAATTTGGGTTATGGATTTAGGTGGAGATTCTTATGATGAATTAATAAGATATTTTAAGTTTATAGATCCAAATCATGAG AATGAAGAATATGTTTTTAATACCTTAGGATATATTGATATAAAAAATATGGCTCATAGGATAAAAGGAAAAGTAAATAT GGCTATAGGGCTAAGGGATGATATATGCCCTCCATCCATTCAATTTGCTGCTTATAACAATATTCTATGTGAAAAAGAGC TAGTTTTATATGATGGTGGACAAAAGCCTTACTTACTAAATTTAAAGGACAAGATATACAAGTGGGCTATAAATCTTTAA
Upstream 100 bases:
>100_bases TAAATTAAATGAAAATAAAAAAATATAAATAATTATTTATAAGGGGAGAATAATTATTTAATTAAGTGTAGGTTTAAGGG AATATAGGGGGAAGAGTATT
Downstream 100 bases:
>100_bases ATTGAATAATATTTTATAATTGATATAATTATATTAGGGGATGAATTTTAGATTGAATTCATCCCTTTATACATATTTAG AAAGAAGATGAGTTTATGAG
Product: acetylxylan esterase
Products: NA
Alternate protein names: Acetyl xylan esterase [H]
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MAILDMSLEKLYEYRGISPLPEDFDEFWDSELRELANLDIKLELKKADFESPIAECYDLYFNGINGARIYAKFMKPKEVK RKMPALLEFHGYEERSNDWSNNLHYVASGMCVAVMECRGQDYLKEDSCKFKSFKSKGHIVRGLVEGREKLLFKNIFLDTA ILARIVMNMEWVDEERVFATGGSQGGALALACAALENRIKGVYAYYPFLCDYKRIWVMDLGGDSYDELIRYFKFIDPNHE NEEYVFNTLGYIDIKNMAHRIKGKVNMAIGLRDDICPPSIQFAAYNNILCEKELVLYDGGQKPYLLNLKDKIYKWAINL
Sequences:
>Translated_319_residues MAILDMSLEKLYEYRGISPLPEDFDEFWDSELRELANLDIKLELKKADFESPIAECYDLYFNGINGARIYAKFMKPKEVK RKMPALLEFHGYEERSNDWSNNLHYVASGMCVAVMECRGQDYLKEDSCKFKSFKSKGHIVRGLVEGREKLLFKNIFLDTA ILARIVMNMEWVDEERVFATGGSQGGALALACAALENRIKGVYAYYPFLCDYKRIWVMDLGGDSYDELIRYFKFIDPNHE NEEYVFNTLGYIDIKNMAHRIKGKVNMAIGLRDDICPPSIQFAAYNNILCEKELVLYDGGQKPYLLNLKDKIYKWAINL >Mature_318_residues AILDMSLEKLYEYRGISPLPEDFDEFWDSELRELANLDIKLELKKADFESPIAECYDLYFNGINGARIYAKFMKPKEVKR KMPALLEFHGYEERSNDWSNNLHYVASGMCVAVMECRGQDYLKEDSCKFKSFKSKGHIVRGLVEGREKLLFKNIFLDTAI LARIVMNMEWVDEERVFATGGSQGGALALACAALENRIKGVYAYYPFLCDYKRIWVMDLGGDSYDELIRYFKFIDPNHEN EEYVFNTLGYIDIKNMAHRIKGKVNMAIGLRDDICPPSIQFAAYNNILCEKELVLYDGGQKPYLLNLKDKIYKWAINL
Specific function: Esterase that removed acetyl groups from a number of O- acetylated small substrates, such as acetylated xylose, short xylooligosaccharides and cephalosporin C. Has no activity towards polymeric acetylated xylan. Cannot cleave amide linkages [H]
COG id: COG3458
COG function: function code Q; Acetyl esterase (deacetylase)
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate esterase 7 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008391 [H]
Pfam domain/function: PF05448 AXE1 [H]
EC number: =3.1.1.41; =3.1.1.72 [H]
Molecular weight: Translated: 36987; Mature: 36856
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAILDMSLEKLYEYRGISPLPEDFDEFWDSELRELANLDIKLELKKADFESPIAECYDLY CEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHH FNGINGARIYAKFMKPKEVKRKMPALLEFHGYEERSNDWSNNLHYVASGMCVAVMECRGQ HCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC DYLKEDSCKFKSFKSKGHIVRGLVEGREKLLFKNIFLDTAILARIVMNMEWVDEERVFAT CCHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE GGSQGGALALACAALENRIKGVYAYYPFLCDYKRIWVMDLGGDSYDELIRYFKFIDPNHE CCCCCCHHHHHHHHHHHHHCEEHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCCC NEEYVFNTLGYIDIKNMAHRIKGKVNMAIGLRDDICPPSIQFAAYNNILCEKELVLYDGG CCHHEEHHCCEEEHHHHHHHHCCCEEEEEECCCCCCCCCEEEEHHCCEEECCEEEEEECC QKPYLLNLKDKIYKWAINL CCCEEECHHHHHHHHEECC >Mature Secondary Structure AILDMSLEKLYEYRGISPLPEDFDEFWDSELRELANLDIKLELKKADFESPIAECYDLY EEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHH FNGINGARIYAKFMKPKEVKRKMPALLEFHGYEERSNDWSNNLHYVASGMCVAVMECRGQ HCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC DYLKEDSCKFKSFKSKGHIVRGLVEGREKLLFKNIFLDTAILARIVMNMEWVDEERVFAT CCHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE GGSQGGALALACAALENRIKGVYAYYPFLCDYKRIWVMDLGGDSYDELIRYFKFIDPNHE CCCCCCHHHHHHHHHHHHHCEEHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCCC NEEYVFNTLGYIDIKNMAHRIKGKVNMAIGLRDDICPPSIQFAAYNNILCEKELVLYDGG CCHHEEHHCCEEEHHHHHHHHCCCEEEEEECCCCCCCCCEEEEHHCCEEECCEEEEEECC QKPYLLNLKDKIYKWAINL CCCEEECHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969502; 9384377 [H]