| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is asrA [H]
Identifier: 18310520
GI number: 18310520
Start: 1801169
End: 1802200
Strand: Reverse
Name: asrA [H]
Synonym: CPE1538
Alternate gene names: 18310520
Gene position: 1802200-1801169 (Counterclockwise)
Preceding gene: 18310522
Following gene: 18310519
Centisome position: 59.45
GC content: 28.49
Gene sequence:
>1032_bases ATGGGATACAAATTAAATTTAAAAGAAGTAAATGATTTATTTAATGAGCTTAAAAAAGAGTATATAATTTATGCTCCAAA AAGATTTGAGAAGCAAGGAAGATACTCAGACACAGACATTATAAAATACGATGTTATAAATAATGTGGAAGAAATAGTAC ATAATGAAAAGTCAACTTATCCAGTAAAAGAAGTAATTACTCCAATTTCTCAAACTTTATATTATTTCATAGAAAATGAG TTTAGAGAAAGTAAAATGGATAGTCAAAAGAAGATTCTTATATTTGCAAGACCATGTGATATAAATGCACAAAGAAGACA AGATACTATATATCTTAAAAATGGAAATTTTGAAGATACATTCTATAAAAGAATGAGAGATAGAGTTAAGTTTATTTGCA TGGAATGTACAGAGGGATGGGATACTTGTTTCTGTACAACAATGAATAGCAATAAAACTGATGACTATAGTTTAGCAGTA AGATTTAATGAGGATAATTTACTTTTTAATGTTAAAGAAGAAGAATTTAATAAATACTTTGAAGGAAAAGAAGAAGAGGA ATTTGAACTTAAGTTTATTGAAGAAAATATAGCTAAGGTTGAATTGCCAGAAATAGAGAGTGTTGAAGTTTTAAATAAAT TAAAGGATCATAAAATGTGGGAAGAATACAATAAAAGATGTATTCAATGTGGAAGTTGTACTCTAGCTTGTAGTACATGT ACATGTTTTACAACAAGGGATATAGTTCATGATTCAAAGCATAACATAGGTGAAAGAAAGAGAATACAAGCATCTTGTCA TGTAGATGGATTTGATGAAATGGCTGGTGGACATGTATTTAGAAAGACTGCTGGCGATAAAATGAGATATAAAGTTATGC ATAAAATTCATGATTATAAAGCTCAATTTGGAGAAGAGCATATGTGTGTAGGATGTGGAAGATGTACAGATAGATGTCCA GAACATATATCAATTACAGCTACTATTAATAAGGTTTCAAAAGCAGTAAAAGAGATAATGGAGGAGATGTAA
Upstream 100 bases:
>100_bases TTTAACTTATCTATAAAAATAGAGTATTATAAATGTGTAAGGAGTTTGTTAAAAAATAAACTATCAAAAGATGAATGGTT TAAATTTTGGAGGTGTTTGA
Downstream 100 bases:
>100_bases ATGGAAAATATTTTAACACCTAAATCATGTGAAATAATAGACATAGTTAAGGAAACTGACAAAGAATGGACTTTTAGAAT AGCTTCTGATGTCGTTCCAG
Product: anaerobic sulfite reductase subunit A
Products: NA
Alternate protein names: Anaerobic sulfite reductase iron-sulfur subunit [H]
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MGYKLNLKEVNDLFNELKKEYIIYAPKRFEKQGRYSDTDIIKYDVINNVEEIVHNEKSTYPVKEVITPISQTLYYFIENE FRESKMDSQKKILIFARPCDINAQRRQDTIYLKNGNFEDTFYKRMRDRVKFICMECTEGWDTCFCTTMNSNKTDDYSLAV RFNEDNLLFNVKEEEFNKYFEGKEEEEFELKFIEENIAKVELPEIESVEVLNKLKDHKMWEEYNKRCIQCGSCTLACSTC TCFTTRDIVHDSKHNIGERKRIQASCHVDGFDEMAGGHVFRKTAGDKMRYKVMHKIHDYKAQFGEEHMCVGCGRCTDRCP EHISITATINKVSKAVKEIMEEM
Sequences:
>Translated_343_residues MGYKLNLKEVNDLFNELKKEYIIYAPKRFEKQGRYSDTDIIKYDVINNVEEIVHNEKSTYPVKEVITPISQTLYYFIENE FRESKMDSQKKILIFARPCDINAQRRQDTIYLKNGNFEDTFYKRMRDRVKFICMECTEGWDTCFCTTMNSNKTDDYSLAV RFNEDNLLFNVKEEEFNKYFEGKEEEEFELKFIEENIAKVELPEIESVEVLNKLKDHKMWEEYNKRCIQCGSCTLACSTC TCFTTRDIVHDSKHNIGERKRIQASCHVDGFDEMAGGHVFRKTAGDKMRYKVMHKIHDYKAQFGEEHMCVGCGRCTDRCP EHISITATINKVSKAVKEIMEEM >Mature_342_residues GYKLNLKEVNDLFNELKKEYIIYAPKRFEKQGRYSDTDIIKYDVINNVEEIVHNEKSTYPVKEVITPISQTLYYFIENEF RESKMDSQKKILIFARPCDINAQRRQDTIYLKNGNFEDTFYKRMRDRVKFICMECTEGWDTCFCTTMNSNKTDDYSLAVR FNEDNLLFNVKEEEFNKYFEGKEEEEFELKFIEENIAKVELPEIESVEVLNKLKDHKMWEEYNKRCIQCGSCTLACSTCT CFTTRDIVHDSKHNIGERKRIQASCHVDGFDEMAGGHVFRKTAGDKMRYKVMHKIHDYKAQFGEEHMCVGCGRCTDRCPE HISITATINKVSKAVKEIMEEM
Specific function: Electron transfer protein for anaerobic sulfite reductase subunit A [H]
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR012285 - InterPro: IPR009051 - InterPro: IPR014259 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40530; Mature: 40398
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYKLNLKEVNDLFNELKKEYIIYAPKRFEKQGRYSDTDIIKYDVINNVEEIVHNEKSTY CCCCCCHHHHHHHHHHHHHHEEEECCHHHHHCCCCCCCCEEEHHHHHHHHHHHCCCCCCC PVKEVITPISQTLYYFIENEFRESKMDSQKKILIFARPCDINAQRRQDTIYLKNGNFEDT CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCHH FYKRMRDRVKFICMECTEGWDTCFCTTMNSNKTDDYSLAVRFNEDNLLFNVKEEEFNKYF HHHHHHHHHHEEHHHHCCCCCEEEEEECCCCCCCCEEEEEEECCCCEEEEECHHHHHHHH EGKEEEEFELKFIEENIAKVELPEIESVEVLNKLKDHKMWEEYNKRCIQCGSCTLACSTC CCCCCCHHHHHHHHHCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECEE TCFTTRDIVHDSKHNIGERKRIQASCHVDGFDEMAGGHVFRKTAGDKMRYKVMHKIHDYK EEEHHHHHHHCCCCCCCCHHHEEEECCCCCHHHHCCCEEEECCCCCHHHHHHHHHHHHHH AQFGEEHMCVGCGRCTDRCPEHISITATINKVSKAVKEIMEEM HHHCCCCEEEECCCHHHCCCCCEEEEEEHHHHHHHHHHHHHHC >Mature Secondary Structure GYKLNLKEVNDLFNELKKEYIIYAPKRFEKQGRYSDTDIIKYDVINNVEEIVHNEKSTY CCCCCHHHHHHHHHHHHHHEEEECCHHHHHCCCCCCCCEEEHHHHHHHHHHHCCCCCCC PVKEVITPISQTLYYFIENEFRESKMDSQKKILIFARPCDINAQRRQDTIYLKNGNFEDT CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCHH FYKRMRDRVKFICMECTEGWDTCFCTTMNSNKTDDYSLAVRFNEDNLLFNVKEEEFNKYF HHHHHHHHHHEEHHHHCCCCCEEEEEECCCCCCCCEEEEEEECCCCEEEEECHHHHHHHH EGKEEEEFELKFIEENIAKVELPEIESVEVLNKLKDHKMWEEYNKRCIQCGSCTLACSTC CCCCCCHHHHHHHHHCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECEE TCFTTRDIVHDSKHNIGERKRIQASCHVDGFDEMAGGHVFRKTAGDKMRYKVMHKIHDYK EEEHHHHHHHCCCCCCCCHHHEEEECCCCCHHHHCCCEEEECCCCCHHHHHHHHHHHHHH AQFGEEHMCVGCGRCTDRCPEHISITATINKVSKAVKEIMEEM HHHCCCCEEEECCCHHHCCCCCEEEEEEHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1704886; 11677609 [H]