Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310517

Identifier: 18310517

GI number: 18310517

Start: 1798180

End: 1798806

Strand: Reverse

Name: 18310517

Synonym: CPE1535

Alternate gene names: NA

Gene position: 1798806-1798180 (Counterclockwise)

Preceding gene: 18310518

Following gene: 18310516

Centisome position: 59.34

GC content: 25.84

Gene sequence:

>627_bases
ATGAGTAATAAAATAATAAAATCATATTGGGGTGTTGAATTAAGTCCAAGATTTATTGATGCTGGAAGTAAAAAGCTTTG
TATAATATTACCTGGAATAGGATATTGTTTAGATAGATCTTACTTAGATTATTCTAAGCAATTAGCAAAAGAAATAGGAT
ATGATGTTCTAGAAATAGAATATGGATATCAAATAAACAGAAGCGAATTTAATATTGAAAAAGAGTTTAGCATAATGGTT
TCTGAGTCATTAGAAGTTATAGACAATGCCATAGAAAAAGAATATGAAGAGATTTTAATAATAGGAAAAAGTATTGGAAC
AAGTGTACAATCCTTCTTAAATAAAGATTTAAGTGGAAGATTTAAAAATATAAGAAATATATATATAAGCCCAATAAATA
AGACTTTAGATGAGTTTAACATAGAATCTAATTCTTTAGTTATAACAGGAGATAAAGATCCATTATTAAGTATAGCTCAT
AGAGTAGAGATAGAAAAAAGAGAAGATATAGAAAGTTTTATAATAGAAGGTGCAAATCATGCTCTTGATATAGAGGGAAA
TGTTATGAACACCGTTGATGCTTTAAAAGAGTCTTTAGAAATAGAAAAAGATTTTATACTGAAATAA

Upstream 100 bases:

>100_bases
TAAAAATAATTTGTCCTAAGAAGTGAAATATTTCTTCTCCCTTTCATATCACTTTTTAGGACAGATTTTTGAAAACTTTA
AAAATTAGGAGGTTTTTAAA

Downstream 100 bases:

>100_bases
TTAAATTAAAATGAAAAAGAATAAGGTTAATCAGGAATGGTTAACCTTATTCTTTTTCATTTTAAATATTTTAATCTTTT
ATGAAACTAATTCCATATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MSNKIIKSYWGVELSPRFIDAGSKKLCIILPGIGYCLDRSYLDYSKQLAKEIGYDVLEIEYGYQINRSEFNIEKEFSIMV
SESLEVIDNAIEKEYEEILIIGKSIGTSVQSFLNKDLSGRFKNIRNIYISPINKTLDEFNIESNSLVITGDKDPLLSIAH
RVEIEKREDIESFIIEGANHALDIEGNVMNTVDALKESLEIEKDFILK

Sequences:

>Translated_208_residues
MSNKIIKSYWGVELSPRFIDAGSKKLCIILPGIGYCLDRSYLDYSKQLAKEIGYDVLEIEYGYQINRSEFNIEKEFSIMV
SESLEVIDNAIEKEYEEILIIGKSIGTSVQSFLNKDLSGRFKNIRNIYISPINKTLDEFNIESNSLVITGDKDPLLSIAH
RVEIEKREDIESFIIEGANHALDIEGNVMNTVDALKESLEIEKDFILK
>Mature_207_residues
SNKIIKSYWGVELSPRFIDAGSKKLCIILPGIGYCLDRSYLDYSKQLAKEIGYDVLEIEYGYQINRSEFNIEKEFSIMVS
ESLEVIDNAIEKEYEEILIIGKSIGTSVQSFLNKDLSGRFKNIRNIYISPINKTLDEFNIESNSLVITGDKDPLLSIAHR
VEIEKREDIESFIIEGANHALDIEGNVMNTVDALKESLEIEKDFILK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23726; Mature: 23595

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKIIKSYWGVELSPRFIDAGSKKLCIILPGIGYCLDRSYLDYSKQLAKEIGYDVLEIE
CCCCHHHHHCCCCCCCCEECCCCCEEEEEECCCHHHHCCHHHHHHHHHHHHHCCEEEEEE
YGYQINRSEFNIEKEFSIMVSESLEVIDNAIEKEYEEILIIGKSIGTSVQSFLNKDLSGR
ECCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHCCCHHHH
FKNIRNIYISPINKTLDEFNIESNSLVITGDKDPLLSIAHRVEIEKREDIESFIIEGANH
HHHHHEEEECCHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHHHCCCCC
ALDIEGNVMNTVDALKESLEIEKDFILK
EEEECCCHHHHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure 
SNKIIKSYWGVELSPRFIDAGSKKLCIILPGIGYCLDRSYLDYSKQLAKEIGYDVLEIE
CCCHHHHHCCCCCCCCEECCCCCEEEEEECCCHHHHCCHHHHHHHHHHHHHCCEEEEEE
YGYQINRSEFNIEKEFSIMVSESLEVIDNAIEKEYEEILIIGKSIGTSVQSFLNKDLSGR
ECCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHCCCHHHH
FKNIRNIYISPINKTLDEFNIESNSLVITGDKDPLLSIAHRVEIEKREDIESFIIEGANH
HHHHHEEEECCHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHHHCCCCC
ALDIEGNVMNTVDALKESLEIEKDFILK
EEEECCCHHHHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA