Click here to switch to the map view.

The map label for this gene is yheN [H]

Identifier: 18310489

GI number: 18310489

Start: 1760330

End: 1761292

Strand: Reverse

Name: yheN [H]

Synonym: CPE1507

Alternate gene names: 18310489

Gene position: 1761292-1760330 (Counterclockwise)

Preceding gene: 18310490

Following gene: 18310487

Centisome position: 58.1

GC content: 29.39

Gene sequence:

>963_bases
ATGAGTAAGGAGACTTTGAGCAAAAGAAAAAAGAAGAATTTAGAGAAAAAATATATACGAAGAAGAATTGGGGTAGTATT
AATTGCTATAGTTGCTTTAGTCTTTTTAGGGACAAGAATTGCTTTAAATCATAAAGTAGAAGTAGCTAAGGGCAATACAG
GTGATGAAGGTGAAAATAAAGAATTAGTAATGGAAGAAGCTACAGTTGAGCTTCCACAATATAAATCAACAGATATTGTT
CCAGGTAGAAATGTTACTTTTGATGGTAAAAATTATGCTGTTAATGTAAAGGATGTAAGTAAAATGGTAGAAGGTTCTTA
TGAAGGAAATGAAAAATATGTTTTTCTTACCTTTGATGATGGACCAAGTCCACTTACAGAACAAGTTTTAGATATATTAA
AAAATGAAAATGTAAAGGGGACTTTTTTTATGTTAGGTTCTAGATTAGACTCTGGACAAGCGCCTAAGGAGAGTTTAAAA
AGAGCCATAGAAGAGGGAAATGCTATAGCCAATCACAGTTATAGTCATAATTTTAAAAAGCTTTATCCAGGAAATATAAC
AGATGTTAATTATTTTATGGATGAATTTAGAAAAACAAATGATATAATGAGGGATGTTCTTGGTGTTGAGTTTGATACAA
ATGTTTTAAGAATGCCAGGAGGCTATAATAGTAGAGTATATTATAAGGATAGAAATTTAGAAGAGTTAGATAATAATTTA
GAGAGTAATAAAATAGTAAGTATAGATTGGAATGCTCTAAATGGTGATGCAGAAGGAAAACCTTATACCTTAAATGAAAT
GATTGATTATGTAAAAAGAACATCAAGGGGAAAAAATCAAGTGGTTTTACTTATGCATGATACCTTTGGAAAAGAAAAGA
CAGTAAAAGTATTACCTGAAATAATAAAATATTATAAAGAAGAAGGGTATGAGTTTAAAACCATAAGTGATGCTAATGTA
TAA

Upstream 100 bases:

>100_bases
AAAGTACATAAAATAAAACTATTCTGTAATAAAAAACTTACCATTTCAAAAGTGAAATTTTTATATAATAAAATAAATTA
AGTTGTGTTTTGGAGGTATT

Downstream 100 bases:

>100_bases
AATGAAGAGAGCGTGTATTGAAATAAAAATTTCAACACACGCTCTTTTTATTACTTAGTTTCTAAATATTCATCATATGT
GCAAACTTTATCAAATTTAA

Product: endo-1,4-beta-xylanase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MSKETLSKRKKKNLEKKYIRRRIGVVLIAIVALVFLGTRIALNHKVEVAKGNTGDEGENKELVMEEATVELPQYKSTDIV
PGRNVTFDGKNYAVNVKDVSKMVEGSYEGNEKYVFLTFDDGPSPLTEQVLDILKNENVKGTFFMLGSRLDSGQAPKESLK
RAIEEGNAIANHSYSHNFKKLYPGNITDVNYFMDEFRKTNDIMRDVLGVEFDTNVLRMPGGYNSRVYYKDRNLEELDNNL
ESNKIVSIDWNALNGDAEGKPYTLNEMIDYVKRTSRGKNQVVLLMHDTFGKEKTVKVLPEIIKYYKEEGYEFKTISDANV

Sequences:

>Translated_320_residues
MSKETLSKRKKKNLEKKYIRRRIGVVLIAIVALVFLGTRIALNHKVEVAKGNTGDEGENKELVMEEATVELPQYKSTDIV
PGRNVTFDGKNYAVNVKDVSKMVEGSYEGNEKYVFLTFDDGPSPLTEQVLDILKNENVKGTFFMLGSRLDSGQAPKESLK
RAIEEGNAIANHSYSHNFKKLYPGNITDVNYFMDEFRKTNDIMRDVLGVEFDTNVLRMPGGYNSRVYYKDRNLEELDNNL
ESNKIVSIDWNALNGDAEGKPYTLNEMIDYVKRTSRGKNQVVLLMHDTFGKEKTVKVLPEIIKYYKEEGYEFKTISDANV
>Mature_319_residues
SKETLSKRKKKNLEKKYIRRRIGVVLIAIVALVFLGTRIALNHKVEVAKGNTGDEGENKELVMEEATVELPQYKSTDIVP
GRNVTFDGKNYAVNVKDVSKMVEGSYEGNEKYVFLTFDDGPSPLTEQVLDILKNENVKGTFFMLGSRLDSGQAPKESLKR
AIEEGNAIANHSYSHNFKKLYPGNITDVNYFMDEFRKTNDIMRDVLGVEFDTNVLRMPGGYNSRVYYKDRNLEELDNNLE
SNKIVSIDWNALNGDAEGKPYTLNEMIDYVKRTSRGKNQVVLLMHDTFGKEKTVKVLPEIIKYYKEEGYEFKTISDANV

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 36486; Mature: 36355

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKETLSKRKKKNLEKKYIRRRIGVVLIAIVALVFLGTRIALNHKVEVAKGNTGDEGENK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCCCCCCCC
ELVMEEATVELPQYKSTDIVPGRNVTFDGKNYAVNVKDVSKMVEGSYEGNEKYVFLTFDD
EEEEHHHHHCCCCCCCCCCCCCCCEEECCCCEEEEHHHHHHHHCCCCCCCCEEEEEEECC
GPSPLTEQVLDILKNENVKGTFFMLGSRLDSGQAPKESLKRAIEEGNAIANHSYSHNFKK
CCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCEECCCCCCCCCE
LYPGNITDVNYFMDEFRKTNDIMRDVLGVEFDTNVLRMPGGYNSRVYYKDRNLEELDNNL
ECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEECCCHHHHHCCC
ESNKIVSIDWNALNGDAEGKPYTLNEMIDYVKRTSRGKNQVVLLMHDTFGKEKTVKVLPE
CCCEEEEEECCEECCCCCCCCEEHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHH
IIKYYKEEGYEFKTISDANV
HHHHHHHCCCEEEEECCCCC
>Mature Secondary Structure 
SKETLSKRKKKNLEKKYIRRRIGVVLIAIVALVFLGTRIALNHKVEVAKGNTGDEGENK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCCCCCCCC
ELVMEEATVELPQYKSTDIVPGRNVTFDGKNYAVNVKDVSKMVEGSYEGNEKYVFLTFDD
EEEEHHHHHCCCCCCCCCCCCCCCEEECCCCEEEEHHHHHHHHCCCCCCCCEEEEEEECC
GPSPLTEQVLDILKNENVKGTFFMLGSRLDSGQAPKESLKRAIEEGNAIANHSYSHNFKK
CCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCEECCCCCCCCCE
LYPGNITDVNYFMDEFRKTNDIMRDVLGVEFDTNVLRMPGGYNSRVYYKDRNLEELDNNL
ECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEECCCHHHHHCCC
ESNKIVSIDWNALNGDAEGKPYTLNEMIDYVKRTSRGKNQVVLLMHDTFGKEKTVKVLPE
CCCEEEEEECCEECCCCCCCCEEHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHH
IIKYYKEEGYEFKTISDANV
HHHHHHHCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]