Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310469

Identifier: 18310469

GI number: 18310469

Start: 1741419

End: 1742423

Strand: Reverse

Name: 18310469

Synonym: CPE1487

Alternate gene names: NA

Gene position: 1742423-1741419 (Counterclockwise)

Preceding gene: 18310470

Following gene: 18310468

Centisome position: 57.48

GC content: 29.75

Gene sequence:

>1005_bases
GTGAAAAAATTAAATAAGTTTTTATCATTAGTTCTAATGGTATTATTTTCATTAAGTATATTAGTAGGATGCAATACTTC
TAAGAAAGAAGAAGCTAAGGCACCAGAAGAAAAAACATCCATAGAGATAGTAGTACCAGATGGACTTCCAGCTATTAGTA
TAGTTAAAATGATAAAAGAAAAACCAGAAATAATGAAAGGCTTAGATATAAATTATTCAATAGTAAAGGGATCAGATGCT
TTAGTTTCTAAGGTGTTAAAAGGAGAGGGAGATATATGTATAGTTCCTTCAAATGTAGCTGCTATTGCATATAACAAGGA
AGCTAAATATAAACTTGCAGGAACAGTAGGTTTTGGTTCATTATATGTTATAAGCAGTGATGATTCTGTTAATAGCTTAG
AAGATCTTAAAGGAAAAGATGTTTACAATGTTGGCCAAGGATTGACTCCTGATTTAATATTTAAAATATTGCTTCAAAAT
GATGGAATAAATCCTGAAAAAGATTTAACATTAAGTTATGTAAATGCAGCTTCAGAATTAGCTCCTTTATTTATAGAGGG
AAAAGCTAAATATGCAGTTGTTCCAGAACCTATGTTAACTCAAATAATGACAAAGAAACCAGAAACAAAAATAGTAGCAT
CATTAAATGAACAGTGGAAAGAAATGAGTGATTCAAAAATGGGATATCCTCAGTCTAGTGTTATAGTTAAAGAGGACCTA
GCAAAAAATAATTCAGAGGCTGTTCAAAAGATCTTAAAGGAAATAGATAATAGTACTAAGTGGGCAAATGAAAATAAAGA
AGAAGCAGGTGCCTTTGCAGAAGAAGTTGGCATAACAGGAAAAAAAGAAATAATAGCTAAATCTCTAGAAAGAGCAAATT
TAAATTACGTAAGTGCTTTAGATAGTGAAAGTGAATATATTAAATATTATGACAAGATTTACAGCTTAGAGCCTAAAGCT
ATAGGAGGTAAAAAGGTAAATGAAGAAATTTTCTTACAAAAATAA

Upstream 100 bases:

>100_bases
CAGTGCCAGAAATTCAAGGAAAAAAATAGATATATATTGAAAAAATAATGAATAAGTGGCAAAATAAAACATAGAAAATT
TATTATATGGAGGTGCAGGG

Downstream 100 bases:

>100_bases
GAAATTAATATTTTTATCTTCAGTTATACTTTTTATTTTATGGCAATTAGCTAGTATGATTATAGGGAGTGAGGTAATAT
TACCTTCTCCCTATTTAACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKKLNKFLSLVLMVLFSLSILVGCNTSKKEEAKAPEEKTSIEIVVPDGLPAISIVKMIKEKPEIMKGLDINYSIVKGSDA
LVSKVLKGEGDICIVPSNVAAIAYNKEAKYKLAGTVGFGSLYVISSDDSVNSLEDLKGKDVYNVGQGLTPDLIFKILLQN
DGINPEKDLTLSYVNAASELAPLFIEGKAKYAVVPEPMLTQIMTKKPETKIVASLNEQWKEMSDSKMGYPQSSVIVKEDL
AKNNSEAVQKILKEIDNSTKWANENKEEAGAFAEEVGITGKKEIIAKSLERANLNYVSALDSESEYIKYYDKIYSLEPKA
IGGKKVNEEIFLQK

Sequences:

>Translated_334_residues
MKKLNKFLSLVLMVLFSLSILVGCNTSKKEEAKAPEEKTSIEIVVPDGLPAISIVKMIKEKPEIMKGLDINYSIVKGSDA
LVSKVLKGEGDICIVPSNVAAIAYNKEAKYKLAGTVGFGSLYVISSDDSVNSLEDLKGKDVYNVGQGLTPDLIFKILLQN
DGINPEKDLTLSYVNAASELAPLFIEGKAKYAVVPEPMLTQIMTKKPETKIVASLNEQWKEMSDSKMGYPQSSVIVKEDL
AKNNSEAVQKILKEIDNSTKWANENKEEAGAFAEEVGITGKKEIIAKSLERANLNYVSALDSESEYIKYYDKIYSLEPKA
IGGKKVNEEIFLQK
>Mature_334_residues
MKKLNKFLSLVLMVLFSLSILVGCNTSKKEEAKAPEEKTSIEIVVPDGLPAISIVKMIKEKPEIMKGLDINYSIVKGSDA
LVSKVLKGEGDICIVPSNVAAIAYNKEAKYKLAGTVGFGSLYVISSDDSVNSLEDLKGKDVYNVGQGLTPDLIFKILLQN
DGINPEKDLTLSYVNAASELAPLFIEGKAKYAVVPEPMLTQIMTKKPETKIVASLNEQWKEMSDSKMGYPQSSVIVKEDL
AKNNSEAVQKILKEIDNSTKWANENKEEAGAFAEEVGITGKKEIIAKSLERANLNYVSALDSESEYIKYYDKIYSLEPKA
IGGKKVNEEIFLQK

Specific function: Unknown

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36701; Mature: 36701

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLNKFLSLVLMVLFSLSILVGCNTSKKEEAKAPEEKTSIEIVVPDGLPAISIVKMIKE
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHH
KPEIMKGLDINYSIVKGSDALVSKVLKGEGDICIVPSNVAAIAYNKEAKYKLAGTVGFGS
CHHHHHCCCCCEEEEECCHHHHHHHHCCCCCEEEECCCEEEEEECCCCCEEEEEEECCCE
LYVISSDDSVNSLEDLKGKDVYNVGQGLTPDLIFKILLQNDGINPEKDLTLSYVNAASEL
EEEEECCCCCHHHHHCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
APLFIEGKAKYAVVPEPMLTQIMTKKPETKIVASLNEQWKEMSDSKMGYPQSSVIVKEDL
CCEEEECCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHH
AKNNSEAVQKILKEIDNSTKWANENKEEAGAFAEEVGITGKKEIIAKSLERANLNYVSAL
HCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHC
DSESEYIKYYDKIYSLEPKAIGGKKVNEEIFLQK
CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MKKLNKFLSLVLMVLFSLSILVGCNTSKKEEAKAPEEKTSIEIVVPDGLPAISIVKMIKE
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHH
KPEIMKGLDINYSIVKGSDALVSKVLKGEGDICIVPSNVAAIAYNKEAKYKLAGTVGFGS
CHHHHHCCCCCEEEEECCHHHHHHHHCCCCCEEEECCCEEEEEECCCCCEEEEEEECCCE
LYVISSDDSVNSLEDLKGKDVYNVGQGLTPDLIFKILLQNDGINPEKDLTLSYVNAASEL
EEEEECCCCCHHHHHCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
APLFIEGKAKYAVVPEPMLTQIMTKKPETKIVASLNEQWKEMSDSKMGYPQSSVIVKEDL
CCEEEECCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHH
AKNNSEAVQKILKEIDNSTKWANENKEEAGAFAEEVGITGKKEIIAKSLERANLNYVSAL
HCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHC
DSESEYIKYYDKIYSLEPKAIGGKKVNEEIFLQK
CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA