| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310461
Identifier: 18310461
GI number: 18310461
Start: 1734415
End: 1735050
Strand: Reverse
Name: 18310461
Synonym: CPE1479
Alternate gene names: NA
Gene position: 1735050-1734415 (Counterclockwise)
Preceding gene: 18310463
Following gene: 18310460
Centisome position: 57.24
GC content: 27.83
Gene sequence:
>636_bases ATGAGTTTATTTTTAGGAAAAATCCATTTTTGGTTATTTGATAAAATAAAGTGGTTTGAAAATCTAGAGGAAGAAGTTTT AAAAATAGCAAAGGAAAGAAATATGCCAGTAGAGGAGTGGATTTCTTATGCAAATTTAAATTTTGGAGAAAAAACTCCAA ATAAACCTTTAGATGAAATAATAGATGAAAGCAATATACATGGTTGGTTAGAAGGAAGAATAAATTCAGCTGAGAGTAGA TGTGCATATTATATAACTAATATGTTAAAGGAAGATAGTGAAGTAAAGAAGGAGCTTATAGAGCTTTATGAAAACCATGG AAAAATAAATGCAGACGAGTGTAAAGGGCAAATAGATGGGGAAAATATTTTAGAAGTGTATAATTCTTTAAATGATTATA TATTAGATGGTATGCCTTGTGATAGAATTAATGAAATTTTAGAAAATTCTTCTGAAAAAATAGTATGGCATATGAGTAGA GACCTACATGAAAGATTTTGGGAAAGTGTAGGAGGAGATGTAAATGAATTTCATGATTTAAGAAATTCATGGATAAAAGC CTTTGTTAAAGAAATTAATCCAAAATTAGAATTAGTTATTTATGAAGATGGTCTTAAGGCTATAGTAAGAAAATAG
Upstream 100 bases:
>100_bases AAAAAGTTTACAGAAATTATCTTGAAGGTAACCTATGTTACAGAAGAATAGGGAAAGATAAAATATAATTGACTTATAAA TTATATTAAGAGGTGAAAGT
Downstream 100 bases:
>100_bases GTTAGACTATTAATTTTTAAATATTATAATTAAAAGTATAGTGAAATAGGTAAGATAATGGCACTTTGACAATTAAGTAC ATATTATAAATTAAAACCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MSLFLGKIHFWLFDKIKWFENLEEEVLKIAKERNMPVEEWISYANLNFGEKTPNKPLDEIIDESNIHGWLEGRINSAESR CAYYITNMLKEDSEVKKELIELYENHGKINADECKGQIDGENILEVYNSLNDYILDGMPCDRINEILENSSEKIVWHMSR DLHERFWESVGGDVNEFHDLRNSWIKAFVKEINPKLELVIYEDGLKAIVRK
Sequences:
>Translated_211_residues MSLFLGKIHFWLFDKIKWFENLEEEVLKIAKERNMPVEEWISYANLNFGEKTPNKPLDEIIDESNIHGWLEGRINSAESR CAYYITNMLKEDSEVKKELIELYENHGKINADECKGQIDGENILEVYNSLNDYILDGMPCDRINEILENSSEKIVWHMSR DLHERFWESVGGDVNEFHDLRNSWIKAFVKEINPKLELVIYEDGLKAIVRK >Mature_210_residues SLFLGKIHFWLFDKIKWFENLEEEVLKIAKERNMPVEEWISYANLNFGEKTPNKPLDEIIDESNIHGWLEGRINSAESRC AYYITNMLKEDSEVKKELIELYENHGKINADECKGQIDGENILEVYNSLNDYILDGMPCDRINEILENSSEKIVWHMSRD LHERFWESVGGDVNEFHDLRNSWIKAFVKEINPKLELVIYEDGLKAIVRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24897; Mature: 24766
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFLGKIHFWLFDKIKWFENLEEEVLKIAKERNMPVEEWISYANLNFGEKTPNKPLDEI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHH IDESNIHGWLEGRINSAESRCAYYITNMLKEDSEVKKELIELYENHGKINADECKGQIDG HCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHCCCCCH ENILEVYNSLNDYILDGMPCDRINEILENSSEKIVWHMSRDLHERFWESVGGDVNEFHDL HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHH RNSWIKAFVKEINPKLELVIYEDGLKAIVRK HHHHHHHHHHHCCCCEEEEEECCCHHHHHCC >Mature Secondary Structure SLFLGKIHFWLFDKIKWFENLEEEVLKIAKERNMPVEEWISYANLNFGEKTPNKPLDEI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHH IDESNIHGWLEGRINSAESRCAYYITNMLKEDSEVKKELIELYENHGKINADECKGQIDG HCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHCCCCCH ENILEVYNSLNDYILDGMPCDRINEILENSSEKIVWHMSRDLHERFWESVGGDVNEFHDL HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHH RNSWIKAFVKEINPKLELVIYEDGLKAIVRK HHHHHHHHHHHCCCCEEEEEECCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA