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The map label for this gene is yheN [H]

Identifier: 18310459

GI number: 18310459

Start: 1733027

End: 1733743

Strand: Direct

Name: yheN [H]

Synonym: CPE1477

Alternate gene names: 18310459

Gene position: 1733027-1733743 (Clockwise)

Preceding gene: 18310456

Following gene: 18310462

Centisome position: 57.17

GC content: 29.29

Gene sequence:

>717_bases
ATGAAAAAATTTGTTTTTTTACTAATTACATTAATATTTTCTTTTTCAGCCTTAGCTACCTCTTCAAAACCTATTAAAGC
AGCTGAATTAGAAGAAAGCACAAAAAAAATATTTTTAACCTTTGATGATGGCCCTGGTGGTAAGGTTACAGAAGAAATTT
TAAACACCCTTAAAGAAAATGATGTAAAAGCTACATTTTTTTTAATAGGAGAACTAGTAGAAAAACACCCTGATTTAGTT
AAAAGAATGAATGATGAGGGTCATTCCATAGGAGTACACACCTTTACCCATGAGAGAAATAAAATTTACAGAAATGACTC
CTCATTCCTAGAAGAAAACTTAAAAGCTCAAGAATCCATAGAAAAAGTTATTGGAAAGAAAGTATTTTCTCTTAGATTTC
CATTTGGTTCTAATAACAGTACATATACCTTAAAAAAATCCTTAGTAGACTCCTTACATGAACAAGGCTTTAGAATATAT
GATTGGACAGTAGATAGTACTGATGCCCTTAATCCAAACCTAAGCCCAAGTTCTATAGTTCAAAAGTCAATTTCTAATTC
TGATTATATTGTACTTTTAATGCATTGTGGGTATTCTAATAATAATTCTGCTAAAGCATTGCCATCAATCATAAAACATT
TTAAATCAGCTGGATATAGCTTTGAAGTAATAGATGAAAGTACTCCTGAAATTTATAGATTAAAAAATAAATGTTGA

Upstream 100 bases:

>100_bases
TTTCTAATTTGTAACCTAATGTGCTTATATTTAATGCTTTTTTTGAAAATACTAATTAAGATGTCTTAAATATAGAAATA
ATACTTAAGGAAGTGATAAA

Downstream 100 bases:

>100_bases
GATTATCTCTCAACATTTATTTTGTCCCTAATGATAAAATAGATTCAACTAAGGTTTTAGCTATGCATTCCCCTTTTTCA
TCCACTTCAGATTCATCATT

Product: polysaccharide deacetylase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MKKFVFLLITLIFSFSALATSSKPIKAAELEESTKKIFLTFDDGPGGKVTEEILNTLKENDVKATFFLIGELVEKHPDLV
KRMNDEGHSIGVHTFTHERNKIYRNDSSFLEENLKAQESIEKVIGKKVFSLRFPFGSNNSTYTLKKSLVDSLHEQGFRIY
DWTVDSTDALNPNLSPSSIVQKSISNSDYIVLLMHCGYSNNNSAKALPSIIKHFKSAGYSFEVIDESTPEIYRLKNKC

Sequences:

>Translated_238_residues
MKKFVFLLITLIFSFSALATSSKPIKAAELEESTKKIFLTFDDGPGGKVTEEILNTLKENDVKATFFLIGELVEKHPDLV
KRMNDEGHSIGVHTFTHERNKIYRNDSSFLEENLKAQESIEKVIGKKVFSLRFPFGSNNSTYTLKKSLVDSLHEQGFRIY
DWTVDSTDALNPNLSPSSIVQKSISNSDYIVLLMHCGYSNNNSAKALPSIIKHFKSAGYSFEVIDESTPEIYRLKNKC
>Mature_238_residues
MKKFVFLLITLIFSFSALATSSKPIKAAELEESTKKIFLTFDDGPGGKVTEEILNTLKENDVKATFFLIGELVEKHPDLV
KRMNDEGHSIGVHTFTHERNKIYRNDSSFLEENLKAQESIEKVIGKKVFSLRFPFGSNNSTYTLKKSLVDSLHEQGFRIY
DWTVDSTDALNPNLSPSSIVQKSISNSDYIVLLMHCGYSNNNSAKALPSIIKHFKSAGYSFEVIDESTPEIYRLKNKC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 26886; Mature: 26886

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFVFLLITLIFSFSALATSSKPIKAAELEESTKKIFLTFDDGPGGKVTEEILNTLKEN
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHC
DVKATFFLIGELVEKHPDLVKRMNDEGHSIGVHTFTHERNKIYRNDSSFLEENLKAQESI
CCHHHHHHHHHHHHHCHHHHHHCCCCCCEEEEEEEECCCCHHCCCCHHHHHHHHHHHHHH
EKVIGKKVFSLRFPFGSNNSTYTLKKSLVDSLHEQGFRIYDWTVDSTDALNPNLSPSSIV
HHHHHHHHHEEECCCCCCCCEEEHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHH
QKSISNSDYIVLLMHCGYSNNNSAKALPSIIKHFKSAGYSFEVIDESTPEIYRLKNKC
HHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCC
>Mature Secondary Structure
MKKFVFLLITLIFSFSALATSSKPIKAAELEESTKKIFLTFDDGPGGKVTEEILNTLKEN
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHC
DVKATFFLIGELVEKHPDLVKRMNDEGHSIGVHTFTHERNKIYRNDSSFLEENLKAQESI
CCHHHHHHHHHHHHHCHHHHHHCCCCCCEEEEEEEECCCCHHCCCCHHHHHHHHHHHHHH
EKVIGKKVFSLRFPFGSNNSTYTLKKSLVDSLHEQGFRIYDWTVDSTDALNPNLSPSSIV
HHHHHHHHHEEECCCCCCCCEEEHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHH
QKSISNSDYIVLLMHCGYSNNNSAKALPSIIKHFKSAGYSFEVIDESTPEIYRLKNKC
HHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]