| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is znuB [C]
Identifier: 18310439
GI number: 18310439
Start: 1714170
End: 1714979
Strand: Direct
Name: znuB [C]
Synonym: CPE1457
Alternate gene names: 18310439
Gene position: 1714170-1714979 (Clockwise)
Preceding gene: 18310438
Following gene: 18310449
Centisome position: 56.55
GC content: 27.53
Gene sequence:
>810_bases ATGTCTATTATACAAAATATGTTTCAATTTGAATTTATGCGTAATGCATTTATGGCCGGTTTTATAATATCTCTTTTATG TCCCTGTATAGGACTTTTTCTTGTGTTAAAGAGATATTCAATGATAGGGGATACACTTTCCCACTCTTCCTTTGCAGGCG TTGCAATTGGGCTGGTATTTGGATTTAATCCTCTTTTAACAGCATTTTTATTTACTACTATCTGTGCATTACTTATAGAA TTATTAAGAAATTATTATAAAAAATATGCAGAATTATCTATGTCTATTATACTTACCTTTAGTTTAGGATTAGCATTAAT ACTAGTTAGTAGTGGTAAGTCTAGTACAACAGTTAATTCTTTTTTATTCGGAAGTATATTAACAGTTTCAAAAACTGATT TAACCATAATAGCTTTAGTTTCTCTACTTTGTTTTATAGGAATATTTTCATTATATGATAAATTAGTTTATACTACCTTT GATGAAGAAGGAGCTAAGGTTTCTGGAATAAATACAAAACTTATAAATTATATTTTTACAATTATAGTAGGAGCTACTAT TTCTGTTTCAATTAGAGTTATGGGAATACTGGTTATTTCATCAATAATTGTTATACCGGCAGCTACTGCCATGCAATTTA AAAAAGGATTTACTAAATCCCTTATTATTTCAATGATAATAGGAGTTATAGATGTCTTAAGCGGTTTACTTCTAGCTTCT CTATTTGATTTAGCTCCAGGAGGAACTATAGCTTTAACATCAGTAATAGTGCTTATATTATCATTAATTTTAAATAGAAA AAAATTATAA
Upstream 100 bases:
>100_bases ATTAAAAGATTCTAAAGCTACTTTATTTAAAAATAATGAATACTTAAAAAAACTAGATGAAATAAATAATGAATTTATAT AGAAAGGGCTCTTTTAAAAA
Downstream 100 bases:
>100_bases TATAAGTAAAAATGGGTTGTATAAAAAGTTAATAAAACTTACAAACATATTCTGAGAATTACTAGATTTCTCTTCAAACC CTTTGTAAGTTTTATTATTA
Product: ABC transporter
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MSIIQNMFQFEFMRNAFMAGFIISLLCPCIGLFLVLKRYSMIGDTLSHSSFAGVAIGLVFGFNPLLTAFLFTTICALLIE LLRNYYKKYAELSMSIILTFSLGLALILVSSGKSSTTVNSFLFGSILTVSKTDLTIIALVSLLCFIGIFSLYDKLVYTTF DEEGAKVSGINTKLINYIFTIIVGATISVSIRVMGILVISSIIVIPAATAMQFKKGFTKSLIISMIIGVIDVLSGLLLAS LFDLAPGGTIALTSVIVLILSLILNRKKL
Sequences:
>Translated_269_residues MSIIQNMFQFEFMRNAFMAGFIISLLCPCIGLFLVLKRYSMIGDTLSHSSFAGVAIGLVFGFNPLLTAFLFTTICALLIE LLRNYYKKYAELSMSIILTFSLGLALILVSSGKSSTTVNSFLFGSILTVSKTDLTIIALVSLLCFIGIFSLYDKLVYTTF DEEGAKVSGINTKLINYIFTIIVGATISVSIRVMGILVISSIIVIPAATAMQFKKGFTKSLIISMIIGVIDVLSGLLLAS LFDLAPGGTIALTSVIVLILSLILNRKKL >Mature_268_residues SIIQNMFQFEFMRNAFMAGFIISLLCPCIGLFLVLKRYSMIGDTLSHSSFAGVAIGLVFGFNPLLTAFLFTTICALLIEL LRNYYKKYAELSMSIILTFSLGLALILVSSGKSSTTVNSFLFGSILTVSKTDLTIIALVSLLCFIGIFSLYDKLVYTTFD EEGAKVSGINTKLINYIFTIIVGATISVSIRVMGILVISSIIVIPAATAMQFKKGFTKSLIISMIIGVIDVLSGLLLASL FDLAPGGTIALTSVIVLILSLILNRKKL
Specific function: Part of an ATP-driven transport system TP_0034/TP_0035/TP_0036 for a metal [H]
COG id: COG1108
COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-3 integral membrane protein family [H]
Homologues:
Organism=Escherichia coli, GI1788166, Length=255, Percent_Identity=27.843137254902, Blast_Score=106, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001626 [H]
Pfam domain/function: PF00950 ABC-3 [H]
EC number: NA
Molecular weight: Translated: 29140; Mature: 29009
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIIQNMFQFEFMRNAFMAGFIISLLCPCIGLFLVLKRYSMIGDTLSHSSFAGVAIGLVF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH GFNPLLTAFLFTTICALLIELLRNYYKKYAELSMSIILTFSLGLALILVSSGKSSTTVNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH FLFGSILTVSKTDLTIIALVSLLCFIGIFSLYDKLVYTTFDEEGAKVSGINTKLINYIFT HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHH IIVGATISVSIRVMGILVISSIIVIPAATAMQFKKGFTKSLIISMIIGVIDVLSGLLLAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH LFDLAPGGTIALTSVIVLILSLILNRKKL HHHCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SIIQNMFQFEFMRNAFMAGFIISLLCPCIGLFLVLKRYSMIGDTLSHSSFAGVAIGLVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH GFNPLLTAFLFTTICALLIELLRNYYKKYAELSMSIILTFSLGLALILVSSGKSSTTVNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH FLFGSILTVSKTDLTIIALVSLLCFIGIFSLYDKLVYTTFDEEGAKVSGINTKLINYIFT HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHH IIVGATISVSIRVMGILVISSIIVIPAATAMQFKKGFTKSLIISMIIGVIDVLSGLLLAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH LFDLAPGGTIALTSVIVLILSLILNRKKL HHHCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]