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The map label for this gene is 18310430

Identifier: 18310430

GI number: 18310430

Start: 1706848

End: 1707375

Strand: Reverse

Name: 18310430

Synonym: CPE1448

Alternate gene names: NA

Gene position: 1707375-1706848 (Counterclockwise)

Preceding gene: 18310431

Following gene: 18310429

Centisome position: 56.32

GC content: 27.84

Gene sequence:

>528_bases
ATGGAAATATTATCATTGGGAGAAAAAATAAAAAGAAGAAGAAAAGAATTAAATATGACTCTTAAGGAATTAGCGGGGGA
GAGAATAACACCAGGACAAATCAGTTTAGTAGAGTCAGGGAGATCAAATCCTTCAATGGATCTTTTAGAGTATATTGCAA
TCACGCTAAATACTTCCGTTGAATATTTAATGGAAACGGAAAAAATACAAGCTGAAAAGATATGTTTATATTACGAGCAA
ATAGCAGAAAGTGCTATTTTAAATGATGATATAAAAAAGGGTGAGAAATTTATAGAATATGCAATATATTATGCTGATAA
GTATGACCTAATATATAGAAAAGCTAAAAACTTAGCATTAAAGGCTGAGATGTATTTAAAAAGCGAAGAATACGTTTTAG
CTCAACAATATTTCTTATCTGCAAATATGTTGTTTTTACAAATAAACAGTAATATAGATATGGTAAAAACATACTTGAAT
ATAGCAAAAATAAGCTTACATTCAAAAGCATATTATTCAGCTAATTAA

Upstream 100 bases:

>100_bases
TACAAAAATACTGAATAATTGACATTAAAACCTAAATTTATGATATAATTTAATTGGTTATGGATGTTAAAATAATAACA
GTAAGAGGATGATTTAAGCT

Downstream 100 bases:

>100_bases
TACTTAAAAGAAGCTGAAAAGATATACATAAATAATAAATTAACTGAAGATTTACTTCTAGGAGAAATATATTATTTAAT
ATCAAAAACATACTTCTTTA

Product: transcriptional regulator

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain Protein; Tetratricopeptide Repeat Protein

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MEILSLGEKIKRRRKELNMTLKELAGERITPGQISLVESGRSNPSMDLLEYIAITLNTSVEYLMETEKIQAEKICLYYEQ
IAESAILNDDIKKGEKFIEYAIYYADKYDLIYRKAKNLALKAEMYLKSEEYVLAQQYFLSANMLFLQINSNIDMVKTYLN
IAKISLHSKAYYSAN

Sequences:

>Translated_175_residues
MEILSLGEKIKRRRKELNMTLKELAGERITPGQISLVESGRSNPSMDLLEYIAITLNTSVEYLMETEKIQAEKICLYYEQ
IAESAILNDDIKKGEKFIEYAIYYADKYDLIYRKAKNLALKAEMYLKSEEYVLAQQYFLSANMLFLQINSNIDMVKTYLN
IAKISLHSKAYYSAN
>Mature_175_residues
MEILSLGEKIKRRRKELNMTLKELAGERITPGQISLVESGRSNPSMDLLEYIAITLNTSVEYLMETEKIQAEKICLYYEQ
IAESAILNDDIKKGEKFIEYAIYYADKYDLIYRKAKNLALKAEMYLKSEEYVLAQQYFLSANMLFLQINSNIDMVKTYLN
IAKISLHSKAYYSAN

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20314; Mature: 20314

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEILSLGEKIKRRRKELNMTLKELAGERITPGQISLVESGRSNPSMDLLEYIAITLNTSV
CCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCHH
EYLMETEKIQAEKICLYYEQIAESAILNDDIKKGEKFIEYAIYYADKYDLIYRKAKNLAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEE
KAEMYLKSEEYVLAQQYFLSANMLFLQINSNIDMVKTYLNIAKISLHSKAYYSAN
EHHHEECCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHEECCCEEECCC
>Mature Secondary Structure
MEILSLGEKIKRRRKELNMTLKELAGERITPGQISLVESGRSNPSMDLLEYIAITLNTSV
CCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCHH
EYLMETEKIQAEKICLYYEQIAESAILNDDIKKGEKFIEYAIYYADKYDLIYRKAKNLAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEE
KAEMYLKSEEYVLAQQYFLSANMLFLQINSNIDMVKTYLNIAKISLHSKAYYSAN
EHHHEECCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHEECCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA