| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is asrA [H]
Identifier: 18310422
GI number: 18310422
Start: 1697955
End: 1698971
Strand: Reverse
Name: asrA [H]
Synonym: CPE1440
Alternate gene names: 18310422
Gene position: 1698971-1697955 (Counterclockwise)
Preceding gene: 18310423
Following gene: 18310421
Centisome position: 56.05
GC content: 29.7
Gene sequence:
>1017_bases ATGGGTTTAAGGCTTACAAAAGACAATTTTGATAAGATAATAGACTGTTTAAAAAAAGAATATAAGATATACGCTCCTAA AGTTATGGAAGGTAAAGGAAGATTTTCAGATACTGACATGACAAGATATGGAGAAATAGATTCTATAAATGATATTGAGT TTTCAAAGAAGTCAGATTTCTCATATAAAGAAGTTTTACTTCCAATAACTCAAACTTTATTCTTCTTTACTGAAGATAAA TTTAGTGAAGCAAGTGTAGAGGAAAAGAATATATTAATTTTCTTAAGAAGCTGTGATATGCATTCCTTAAGAAGAATTGA TGATATATACTTAAGAAATGGTTTTGAAGATCCTTACTACAAAAAACTAAGAGAAAAAGCTAAGTTTATAGTAATGGGAT GTGAAAATAGCTTTGATAATTGTTTCTGTGTAAGCATGGGAACTAATAAAACAGATGAATATTCAGCATATATAGGATTA GATAATGATGAAGTTTTATTAGATATAAAAGATGAAGAGTTATCAAAAATCTTTGAAGCAGTAGAAAGTAATAAAGAAGA AGTTTCACCAAAATTTGTAGAAGAAAATGAAACTAAGGTTGAAGTTCCAGAGGGAATTGATTTAAACATAATAAAATCAA CTGTATGGAATGAATACTCAGAAAGATGTATAGCTTGTGGAAGATGTAACTTTGTATGTCCAACATGTACTTGTTTCACA ATGCAAGATGTATTCTACAAAGATAATGAAAATGCAGGTGAAAGAAGAAGAGTTTGGGCTTCATGTCAAGTAGATGGATA TACAGATATGGCTGGTGGACATAGCTTTAGAAAAGATAAAGGTCAAAGAATGAGATTTAAAGTTATGCACAAAGTATATG ACTACAAAAAGAGATGGGGATACCATATGTGTGTTGGATGTGGTAGATGTGATGATATCTGTCCAGAATACATATCTTTT TCAGAATGTGTAAATAAACTTAAAGATGCTGTAGAAGAGGTGAAGGATAATGCATAA
Upstream 100 bases:
>100_bases AAAATATTATAAACAAATGAAAGAAAAAAACTTTCATTATTATAATCTATTAGAATTTATTTAATTTCAAAATAAAGTTA AATTTAAGAGGTGTTTTATT
Downstream 100 bases:
>100_bases TGAATATACTCCTTTTATATCAAAAATATTAAACGTAAAAAAACATACTGACATAGAATATACTTTTAGAATGGAATTTA AAGGTGATGTTAAGCCAGGA
Product: anaerobic sulfite reductase subunit A
Products: NA
Alternate protein names: Anaerobic sulfite reductase iron-sulfur subunit [H]
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MGLRLTKDNFDKIIDCLKKEYKIYAPKVMEGKGRFSDTDMTRYGEIDSINDIEFSKKSDFSYKEVLLPITQTLFFFTEDK FSEASVEEKNILIFLRSCDMHSLRRIDDIYLRNGFEDPYYKKLREKAKFIVMGCENSFDNCFCVSMGTNKTDEYSAYIGL DNDEVLLDIKDEELSKIFEAVESNKEEVSPKFVEENETKVEVPEGIDLNIIKSTVWNEYSERCIACGRCNFVCPTCTCFT MQDVFYKDNENAGERRRVWASCQVDGYTDMAGGHSFRKDKGQRMRFKVMHKVYDYKKRWGYHMCVGCGRCDDICPEYISF SECVNKLKDAVEEVKDNA
Sequences:
>Translated_338_residues MGLRLTKDNFDKIIDCLKKEYKIYAPKVMEGKGRFSDTDMTRYGEIDSINDIEFSKKSDFSYKEVLLPITQTLFFFTEDK FSEASVEEKNILIFLRSCDMHSLRRIDDIYLRNGFEDPYYKKLREKAKFIVMGCENSFDNCFCVSMGTNKTDEYSAYIGL DNDEVLLDIKDEELSKIFEAVESNKEEVSPKFVEENETKVEVPEGIDLNIIKSTVWNEYSERCIACGRCNFVCPTCTCFT MQDVFYKDNENAGERRRVWASCQVDGYTDMAGGHSFRKDKGQRMRFKVMHKVYDYKKRWGYHMCVGCGRCDDICPEYISF SECVNKLKDAVEEVKDNA >Mature_337_residues GLRLTKDNFDKIIDCLKKEYKIYAPKVMEGKGRFSDTDMTRYGEIDSINDIEFSKKSDFSYKEVLLPITQTLFFFTEDKF SEASVEEKNILIFLRSCDMHSLRRIDDIYLRNGFEDPYYKKLREKAKFIVMGCENSFDNCFCVSMGTNKTDEYSAYIGLD NDEVLLDIKDEELSKIFEAVESNKEEVSPKFVEENETKVEVPEGIDLNIIKSTVWNEYSERCIACGRCNFVCPTCTCFTM QDVFYKDNENAGERRRVWASCQVDGYTDMAGGHSFRKDKGQRMRFKVMHKVYDYKKRWGYHMCVGCGRCDDICPEYISFS ECVNKLKDAVEEVKDNA
Specific function: Electron transfer protein for anaerobic sulfite reductase subunit A [H]
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR012285 - InterPro: IPR009051 - InterPro: IPR014259 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39444; Mature: 39313
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLRLTKDNFDKIIDCLKKEYKIYAPKVMEGKGRFSDTDMTRYGEIDSINDIEFSKKSDF CCCCCCCCCHHHHHHHHHHHHEEECCEEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC SYKEVLLPITQTLFFFTEDKFSEASVEEKNILIFLRSCDMHSLRRIDDIYLRNGFEDPYY CHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHH KKLREKAKFIVMGCENSFDNCFCVSMGTNKTDEYSAYIGLDNDEVLLDIKDEELSKIFEA HHHHHCCEEEEEECCCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEECHHHHHHHHHH VESNKEEVSPKFVEENETKVEVPEGIDLNIIKSTVWNEYSERCIACGRCNFVCPTCTCFT HHCCHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE MQDVFYKDNENAGERRRVWASCQVDGYTDMAGGHSFRKDKGQRMRFKVMHKVYDYKKRWG HHHHHCCCCCCCCCHHEEEEEEEECCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCC YHMCVGCGRCDDICPEYISFSECVNKLKDAVEEVKDNA CEEEEECCCCHHHCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GLRLTKDNFDKIIDCLKKEYKIYAPKVMEGKGRFSDTDMTRYGEIDSINDIEFSKKSDF CCCCCCCCHHHHHHHHHHHHEEECCEEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC SYKEVLLPITQTLFFFTEDKFSEASVEEKNILIFLRSCDMHSLRRIDDIYLRNGFEDPYY CHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHH KKLREKAKFIVMGCENSFDNCFCVSMGTNKTDEYSAYIGLDNDEVLLDIKDEELSKIFEA HHHHHCCEEEEEECCCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEECHHHHHHHHHH VESNKEEVSPKFVEENETKVEVPEGIDLNIIKSTVWNEYSERCIACGRCNFVCPTCTCFT HHCCHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE MQDVFYKDNENAGERRRVWASCQVDGYTDMAGGHSFRKDKGQRMRFKVMHKVYDYKKRWG HHHHHCCCCCCCCCHHEEEEEEEECCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCC YHMCVGCGRCDDICPEYISFSECVNKLKDAVEEVKDNA CEEEEECCCCHHHCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1704886; 11677609 [H]