| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310386
Identifier: 18310386
GI number: 18310386
Start: 1657055
End: 1658206
Strand: Direct
Name: 18310386
Synonym: CPE1404
Alternate gene names: NA
Gene position: 1657055-1658206 (Clockwise)
Preceding gene: 18310380
Following gene: 18310388
Centisome position: 54.66
GC content: 29.6
Gene sequence:
>1152_bases ATGAAAAGAAAACCAAAAATATTATTAGTGACTTCTTTATCCCTAATAGTATTATTAACCTTATCCATATATGTATCCTT AAACAAAAAGAAAACTTCAGCATTTTCAGAAGCCATAAATTTATTAAATGAACCTGACAAAAAAGAAGATGATGAATTAA AGGGGAAATTTGAAGAAGTACTTCAAGACTTATTTAAAAATAGAAATATAGCCATATTAAACAATGATTTAGAGGAATTA AAGAAATTTTATGATTTAGAAAAAAAGCCTAGTCTTTGGGCCTATGAAAGTGAAAGTAAAAAAGTTAAGTATTTGAATAA CTGGTCTCAAAAACAAGGAGTTGTATTTAATGAAATAAAATCAAAAACTGAAATAAGAAAGGCTAGAGAAAGAGAAAAGG ACTTATACGGAATAATATGTGTTGTTTCAAGTGAATTTACATATTATTATCTTAATGATCCCCTTAAAACTAATACCTTT AGATTAGGTACTTATCACTATTTAAATTTAAAAGATGAGGGAGATAGGTATATTATCACTAAAGAATGGTACACTGATCC TTTTGCTGATTCTCTATATTTAAATAATATAAAATCTGATGAAATTAAATCATATATTTTAAATAGTTCTAGTCCATCTT ATTCACCTGATGAAAGAACACAGAAAGCTATAGATTATGCCCACACCTATTGTGGAGCAGCTGCAGATGATGAACTTGGT TTTAACTACAATAAAAAATACACAGACTTTAACCCTCAAGGAGGAGATTGTGCAAACTTTGCCTCTCAAATTCTTTTTGA AGGTGGTGGATTTAAGAAAAATTCAGCATGGAACTATTCTGATGGTGAAGGTTCTAAGGCTTGGGTAAATGCTCAAGCAT TTAAAAATTACATGGTTAATAGTGGACGTGCTTCTTATATTGCTAAGGGTAAATATTCAGAAATATATAAAGCTGCCTAT AACTTAAGACCTGGTGATTTTGTAGCTTATGAAAAAAATGGACGAATAACTCACATTTCAACAGTTACAGGATTAGATAG TAAAGGTTATCCCCTAGTAACTTGCCATAACACAGATAGACTTCTTGTTCCTTTTGATTTAGGTTGGAGCAATGACAATA TACGCTTTCACCTAGTAGATGTTTATTATTAA
Upstream 100 bases:
>100_bases TATATCTCTTATTAAGTTAATATTTACTTTTATTTATTATTTTTTTTAGTTATTCATCATATACATTATTGAATTATGTA TTAAAAATAGGAGGAGCTTA
Downstream 100 bases:
>100_bases TTTAAATATAAAAATGATATGTATTAAAGTTTTAATACATATCATTTTTAACTATAGTTCTAATCTATATTTTTCTAAGG ACTTAACTATTAAATCAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MKRKPKILLVTSLSLIVLLTLSIYVSLNKKKTSAFSEAINLLNEPDKKEDDELKGKFEEVLQDLFKNRNIAILNNDLEEL KKFYDLEKKPSLWAYESESKKVKYLNNWSQKQGVVFNEIKSKTEIRKAREREKDLYGIICVVSSEFTYYYLNDPLKTNTF RLGTYHYLNLKDEGDRYIITKEWYTDPFADSLYLNNIKSDEIKSYILNSSSPSYSPDERTQKAIDYAHTYCGAAADDELG FNYNKKYTDFNPQGGDCANFASQILFEGGGFKKNSAWNYSDGEGSKAWVNAQAFKNYMVNSGRASYIAKGKYSEIYKAAY NLRPGDFVAYEKNGRITHISTVTGLDSKGYPLVTCHNTDRLLVPFDLGWSNDNIRFHLVDVYY
Sequences:
>Translated_383_residues MKRKPKILLVTSLSLIVLLTLSIYVSLNKKKTSAFSEAINLLNEPDKKEDDELKGKFEEVLQDLFKNRNIAILNNDLEEL KKFYDLEKKPSLWAYESESKKVKYLNNWSQKQGVVFNEIKSKTEIRKAREREKDLYGIICVVSSEFTYYYLNDPLKTNTF RLGTYHYLNLKDEGDRYIITKEWYTDPFADSLYLNNIKSDEIKSYILNSSSPSYSPDERTQKAIDYAHTYCGAAADDELG FNYNKKYTDFNPQGGDCANFASQILFEGGGFKKNSAWNYSDGEGSKAWVNAQAFKNYMVNSGRASYIAKGKYSEIYKAAY NLRPGDFVAYEKNGRITHISTVTGLDSKGYPLVTCHNTDRLLVPFDLGWSNDNIRFHLVDVYY >Mature_383_residues MKRKPKILLVTSLSLIVLLTLSIYVSLNKKKTSAFSEAINLLNEPDKKEDDELKGKFEEVLQDLFKNRNIAILNNDLEEL KKFYDLEKKPSLWAYESESKKVKYLNNWSQKQGVVFNEIKSKTEIRKAREREKDLYGIICVVSSEFTYYYLNDPLKTNTF RLGTYHYLNLKDEGDRYIITKEWYTDPFADSLYLNNIKSDEIKSYILNSSSPSYSPDERTQKAIDYAHTYCGAAADDELG FNYNKKYTDFNPQGGDCANFASQILFEGGGFKKNSAWNYSDGEGSKAWVNAQAFKNYMVNSGRASYIAKGKYSEIYKAAY NLRPGDFVAYEKNGRITHISTVTGLDSKGYPLVTCHNTDRLLVPFDLGWSNDNIRFHLVDVYY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44139; Mature: 44139
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKPKILLVTSLSLIVLLTLSIYVSLNKKKTSAFSEAINLLNEPDKKEDDELKGKFEEV CCCCCCEEEEHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LQDLFKNRNIAILNNDLEELKKFYDLEKKPSLWAYESESKKVKYLNNWSQKQGVVFNEIK HHHHHCCCCEEEECCCHHHHHHHHCCCCCCCEEEECCCCCEEHHHHCCCHHCCCHHHHHH SKTEIRKAREREKDLYGIICVVSSEFTYYYLNDPLKTNTFRLGTYHYLNLKDEGDRYIIT HHHHHHHHHHHCCCEEEEEEEEECCEEEEEECCCCCCCEEEEEEEEEEEECCCCCEEEEE KEWYTDPFADSLYLNNIKSDEIKSYILNSSSPSYSPDERTQKAIDYAHTYCGAAADDELG ECCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC FNYNKKYTDFNPQGGDCANFASQILFEGGGFKKNSAWNYSDGEGSKAWVNAQAFKNYMVN CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHC SGRASYIAKGKYSEIYKAAYNLRPGDFVAYEKNGRITHISTVTGLDSKGYPLVTCHNTDR CCCEEEEECCCHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEECCCCCCCEEEEECCCCE LLVPFDLGWSNDNIRFHLVDVYY EEEEEECCCCCCCEEEEEEEEEC >Mature Secondary Structure MKRKPKILLVTSLSLIVLLTLSIYVSLNKKKTSAFSEAINLLNEPDKKEDDELKGKFEEV CCCCCCEEEEHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LQDLFKNRNIAILNNDLEELKKFYDLEKKPSLWAYESESKKVKYLNNWSQKQGVVFNEIK HHHHHCCCCEEEECCCHHHHHHHHCCCCCCCEEEECCCCCEEHHHHCCCHHCCCHHHHHH SKTEIRKAREREKDLYGIICVVSSEFTYYYLNDPLKTNTFRLGTYHYLNLKDEGDRYIIT HHHHHHHHHHHCCCEEEEEEEEECCEEEEEECCCCCCCEEEEEEEEEEEECCCCCEEEEE KEWYTDPFADSLYLNNIKSDEIKSYILNSSSPSYSPDERTQKAIDYAHTYCGAAADDELG ECCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC FNYNKKYTDFNPQGGDCANFASQILFEGGGFKKNSAWNYSDGEGSKAWVNAQAFKNYMVN CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHC SGRASYIAKGKYSEIYKAAYNLRPGDFVAYEKNGRITHISTVTGLDSKGYPLVTCHNTDR CCCEEEEECCCHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEECCCCCCCEEEEECCCCE LLVPFDLGWSNDNIRFHLVDVYY EEEEEECCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA