| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310379
Identifier: 18310379
GI number: 18310379
Start: 1649129
End: 1649392
Strand: Reverse
Name: 18310379
Synonym: CPE1397
Alternate gene names: NA
Gene position: 1649392-1649129 (Counterclockwise)
Preceding gene: 18310381
Following gene: 18310377
Centisome position: 54.41
GC content: 34.85
Gene sequence:
>264_bases TTGTTAAATATAGATAGAAATGAAATTAAGGATACTCCAGAGTATGAAAGCTTTGGTGAAAATGAATTTCCACTGAAATA CTTAAGTGAAGAAGAGTTAGAAGAGTTAGGCTTTAAAAAAAGTTGTTGTGGAAGTAGAGGAGGATGTCCTAAAAAAGCAA ATGGAACCTGTGGAGGATGTTCTTCAAAGGGAGGATGCCAAGGAGGGTGTTCTAAAAATGGATGTGGATGTTCAAATGGA TCTGGTTGTTGTAAGAATAAATAA
Upstream 100 bases:
>100_bases TTAAGTAGTTAAAGCTTATTTAGTATGTTATATTAATAGGTAATAATACAAAATAATAATTTATTAAATTTGTATTTATA AAAATAATGAGGTGATAATT
Downstream 100 bases:
>100_bases AAAAAATACATACTCATATGAGTATGTATTTTTTTATATTATTTTCTTTTTTTAGCAACTTCTATATTAACAGTTCTTTT GTTAAGTTTTTTACCCATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MLNIDRNEIKDTPEYESFGENEFPLKYLSEEELEELGFKKSCCGSRGGCPKKANGTCGGCSSKGGCQGGCSKNGCGCSNG SGCCKNK
Sequences:
>Translated_87_residues MLNIDRNEIKDTPEYESFGENEFPLKYLSEEELEELGFKKSCCGSRGGCPKKANGTCGGCSSKGGCQGGCSKNGCGCSNG SGCCKNK >Mature_87_residues MLNIDRNEIKDTPEYESFGENEFPLKYLSEEELEELGFKKSCCGSRGGCPKKANGTCGGCSSKGGCQGGCSKNGCGCSNG SGCCKNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9147; Mature: 9147
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
12.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 13.8 %Cys+Met (Translated Protein) 12.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 13.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNIDRNEIKDTPEYESFGENEFPLKYLSEEELEELGFKKSCCGSRGGCPKKANGTCGGC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC SSKGGCQGGCSKNGCGCSNGSGCCKNK CCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLNIDRNEIKDTPEYESFGENEFPLKYLSEEELEELGFKKSCCGSRGGCPKKANGTCGGC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC SSKGGCQGGCSKNGCGCSNGSGCCKNK CCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA