| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310349
Identifier: 18310349
GI number: 18310349
Start: 1613365
End: 1614513
Strand: Reverse
Name: 18310349
Synonym: CPE1367
Alternate gene names: NA
Gene position: 1614513-1613365 (Counterclockwise)
Preceding gene: 18310350
Following gene: 18310348
Centisome position: 53.26
GC content: 26.54
Gene sequence:
>1149_bases ATGAAAAATAGTAAAAAGAGTATTATTTTTATTATAAGTACAGTTTTAATATCTTTTTTAATTATAGGATTTTCAAGATT TATATTTGATAATGGCTTTATGAAGGATAGACTAAATAAAAATGTTAAATATTATGAAGGAAAAGTAAAGAGAATAACTA AAGAGATGTTAGAGGGAGATAAATACATAGAGGGTATAGAGCTAGGATATCAAAATATAGTCATAGAAATTTTAGAGGGA CCAGAAAAGGGTAAGGAATATGAAATCGTAAATAATATTAGCAGAATATACAATATGCCAGTTGAGGAAGATACTAAAGT AATTCTAGGTTTCTTTTATGAGAAGGACGAAATAAAAGATATAGCTGTTTATAGTTATAAAAGAAGTAACATAATATTTT TGCTAGTACTATTATTTGTAATAGTCATAATAGGAGTAGGTGGAATAAAGGGAATAAAATCATTAGTTTCACTGTTTTTT ACTTGTGTTTGTATAATATTTTTAATGATTCCATTGATGTTAAGAGGGGTAAATCCAATATTAGCAGCAATTTTTTCAGC ACTTATAAGTATTATTGTTACATTGGTTTTAGTTTCGGGAATAAATAAAAAAACTTTTACTGCTATTTTAGGAACTTTAA GTGGAATAATTATATCAGGGGTAATAGCAATAGGTTTTGGAAAACTTGCAAATTTATCAGGTATTAGTATGGAAGAAGCT GAAAGTATGATGTATATAGCTGAAAATACTTCCTTAAATATTCATGGAATAATGTTTGCAGCTATATTAATAGCATCTTT AGGGGCAGTTATGGATGTTGCTATGTCTATTTCCTCATCAATTTTCGAAATAAATGATATTAATGATACTTTAAATAAAA GAGGATTATTTAAAAGTGGAATGAATATAGGAAAAGATATAATAGGAACAATGGCTAATACATTAATATTAGCTTTTGCT GGAGGGTCCTTAAATACAATAATAATGTTATATGCTTCTAATATGAGTAAAAATCAAATATTAAATTTAGATGTGCTTTG TATAGAAGTTGTGCAAGGGCTTGCAGGCAGTATAGGAATTATACTTACAGTGCCAATAACAGCTTTTGTAGCAAGTTATT TTTGTAATTTGAATTTAAAAAAAGTGTAA
Upstream 100 bases:
>100_bases AAAGAAAAAAAGTAAGATAAATAATTTATTAAGTTTTTAGGGCTGGCCTTCTTTAGGTCAGCCTCAATAATAAGTAAGTT AGGGTAGTAGGAGAAATATT
Downstream 100 bases:
>100_bases AAAGCCTTTCAAATCAGGGATATAATATGATAGTATAAAACTCTAGACATTATTAATTGAGAATATTTAATACTAAATGA GGAGGACAATAATGAGCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: YibE/F-Like Protein; Multitransmembrane Protein; Integral Membrane Protein; Lipoprotein; Yibe/F Family Protein; Multitransmembrane Protein-Like Protein; YibE/F-Like Family Protein; Multitransmembrane Protein-Like; Conserved Multi-Transmembrane Protein
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MKNSKKSIIFIISTVLISFLIIGFSRFIFDNGFMKDRLNKNVKYYEGKVKRITKEMLEGDKYIEGIELGYQNIVIEILEG PEKGKEYEIVNNISRIYNMPVEEDTKVILGFFYEKDEIKDIAVYSYKRSNIIFLLVLLFVIVIIGVGGIKGIKSLVSLFF TCVCIIFLMIPLMLRGVNPILAAIFSALISIIVTLVLVSGINKKTFTAILGTLSGIIISGVIAIGFGKLANLSGISMEEA ESMMYIAENTSLNIHGIMFAAILIASLGAVMDVAMSISSSIFEINDINDTLNKRGLFKSGMNIGKDIIGTMANTLILAFA GGSLNTIIMLYASNMSKNQILNLDVLCIEVVQGLAGSIGIILTVPITAFVASYFCNLNLKKV
Sequences:
>Translated_382_residues MKNSKKSIIFIISTVLISFLIIGFSRFIFDNGFMKDRLNKNVKYYEGKVKRITKEMLEGDKYIEGIELGYQNIVIEILEG PEKGKEYEIVNNISRIYNMPVEEDTKVILGFFYEKDEIKDIAVYSYKRSNIIFLLVLLFVIVIIGVGGIKGIKSLVSLFF TCVCIIFLMIPLMLRGVNPILAAIFSALISIIVTLVLVSGINKKTFTAILGTLSGIIISGVIAIGFGKLANLSGISMEEA ESMMYIAENTSLNIHGIMFAAILIASLGAVMDVAMSISSSIFEINDINDTLNKRGLFKSGMNIGKDIIGTMANTLILAFA GGSLNTIIMLYASNMSKNQILNLDVLCIEVVQGLAGSIGIILTVPITAFVASYFCNLNLKKV >Mature_382_residues MKNSKKSIIFIISTVLISFLIIGFSRFIFDNGFMKDRLNKNVKYYEGKVKRITKEMLEGDKYIEGIELGYQNIVIEILEG PEKGKEYEIVNNISRIYNMPVEEDTKVILGFFYEKDEIKDIAVYSYKRSNIIFLLVLLFVIVIIGVGGIKGIKSLVSLFF TCVCIIFLMIPLMLRGVNPILAAIFSALISIIVTLVLVSGINKKTFTAILGTLSGIIISGVIAIGFGKLANLSGISMEEA ESMMYIAENTSLNIHGIMFAAILIASLGAVMDVAMSISSSIFEINDINDTLNKRGLFKSGMNIGKDIIGTMANTLILAFA GGSLNTIIMLYASNMSKNQILNLDVLCIEVVQGLAGSIGIILTVPITAFVASYFCNLNLKKV
Specific function: Unknown
COG id: COG5438
COG function: function code S; Predicted multitransmembrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41881; Mature: 41881
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSKKSIIFIISTVLISFLIIGFSRFIFDNGFMKDRLNKNVKYYEGKVKRITKEMLEGD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCC KYIEGIELGYQNIVIEILEGPEKGKEYEIVNNISRIYNMPVEEDTKVILGFFYEKDEIKD HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCH IAVYSYKRSNIIFLLVLLFVIVIIGVGGIKGIKSLVSLFFTCVCIIFLMIPLMLRGVNPI HHEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LAAIFSALISIIVTLVLVSGINKKTFTAILGTLSGIIISGVIAIGFGKLANLSGISMEEA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH ESMMYIAENTSLNIHGIMFAAILIASLGAVMDVAMSISSSIFEINDINDTLNKRGLFKSG HCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHCCHHHHC MNIGKDIIGTMANTLILAFAGGSLNTIIMLYASNMSKNQILNLDVLCIEVVQGLAGSIGI CHHHHHHHHHHHHHHEEEECCCCCCEEEEEEECCCCCCCEECHHHHHHHHHHHHCCCCEE ILTVPITAFVASYFCNLNLKKV EEEHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKNSKKSIIFIISTVLISFLIIGFSRFIFDNGFMKDRLNKNVKYYEGKVKRITKEMLEGD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCC KYIEGIELGYQNIVIEILEGPEKGKEYEIVNNISRIYNMPVEEDTKVILGFFYEKDEIKD HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCH IAVYSYKRSNIIFLLVLLFVIVIIGVGGIKGIKSLVSLFFTCVCIIFLMIPLMLRGVNPI HHEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LAAIFSALISIIVTLVLVSGINKKTFTAILGTLSGIIISGVIAIGFGKLANLSGISMEEA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH ESMMYIAENTSLNIHGIMFAAILIASLGAVMDVAMSISSSIFEINDINDTLNKRGLFKSG HCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHCCHHHHC MNIGKDIIGTMANTLILAFAGGSLNTIIMLYASNMSKNQILNLDVLCIEVVQGLAGSIGI CHHHHHHHHHHHHHHEEEECCCCCCEEEEEEECCCCCCCEECHHHHHHHHHHHHCCCCEE ILTVPITAFVASYFCNLNLKKV EEEHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA