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The map label for this gene is 18310347

Identifier: 18310347

GI number: 18310347

Start: 1611842

End: 1612468

Strand: Direct

Name: 18310347

Synonym: CPE1365

Alternate gene names: NA

Gene position: 1611842-1612468 (Clockwise)

Preceding gene: 18310338

Following gene: 18310352

Centisome position: 53.17

GC content: 29.82

Gene sequence:

>627_bases
ATGGCTAAACGTACAAAAACGCCAAACTACATAAAAATAGCTATTGATATAGCTAATAGAGTTTTAAATAATGATTTTAA
AGAAGGAAGTAAAATTACAGGTCGTACAACCCTAGTTAGCATATATAAAGTTTCACCTGAAACTATAAGACGCTCAGTGG
CCTTACTTAAGGATATGAACGTAGTATCTGTTAATGAAAAAAGTGGAATAATCATAAATAGTAAAGAAAATGCCAAGGAC
TTTTTAAGCAAGTTTAAAGCTCAATCTGACTTTACAACCCTAAGTAATGATACTTATAAAATATTAAAAGCTAAGAACGA
ATTAGACAAGCAACTTGAAAAAAACATAGAAAATATAATTGAATTTGCTACGCAACTTAGAAATGTAGGAACTGTTATCC
CCTTTGAAAGCATTGTTGAAAGTGAAAGCTTTGCTGTTGGAAAAAGCATTGGAGATCTAGACTTTTGGCAAAATACAAAG
GCAACTATAATAGGAGTTAAAAGAAAAGGAGAAATGTTCCTTTCTCCAGGACCTTATTTCAAAATAATGGCTGATGATAT
AATAATGTATGTTGGTGAAGATGAAGTTTTAAAAAATGTAAAAAACTACATATCAAACAATGAATAA

Upstream 100 bases:

>100_bases
ATTTTTTACTAAAAACATCCTTTATAATTTACAAAGCCATTCTCTAAGTGATAAAATCAATTTAGTGCAATATATTAATC
CTATGGAGCGTGATATTATA

Downstream 100 bases:

>100_bases
CTAAAAAGAGAAGTATGATATATCCTCTTAAGGTCATATCATACTTCTTTTTTTATAAATAACTACATTCTTTTTCCTTT
AATGATCTTTTATCAAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; TrkA Domain-Containing Protein; Regulatory Protein; Transcriptional Repressor BusR; TrkA-C Domain Protein; GntR Family Regulatory Protein; Regulatory Protein GntR HTH; TrkA-C Domain-Containing Protein; Fused Transcriptional Regulator/Membrane Protein; GntR Family Transcription Regulator; Gntr-Family Transcriptional Regulator

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MAKRTKTPNYIKIAIDIANRVLNNDFKEGSKITGRTTLVSIYKVSPETIRRSVALLKDMNVVSVNEKSGIIINSKENAKD
FLSKFKAQSDFTTLSNDTYKILKAKNELDKQLEKNIENIIEFATQLRNVGTVIPFESIVESESFAVGKSIGDLDFWQNTK
ATIIGVKRKGEMFLSPGPYFKIMADDIIMYVGEDEVLKNVKNYISNNE

Sequences:

>Translated_208_residues
MAKRTKTPNYIKIAIDIANRVLNNDFKEGSKITGRTTLVSIYKVSPETIRRSVALLKDMNVVSVNEKSGIIINSKENAKD
FLSKFKAQSDFTTLSNDTYKILKAKNELDKQLEKNIENIIEFATQLRNVGTVIPFESIVESESFAVGKSIGDLDFWQNTK
ATIIGVKRKGEMFLSPGPYFKIMADDIIMYVGEDEVLKNVKNYISNNE
>Mature_207_residues
AKRTKTPNYIKIAIDIANRVLNNDFKEGSKITGRTTLVSIYKVSPETIRRSVALLKDMNVVSVNEKSGIIINSKENAKDF
LSKFKAQSDFTTLSNDTYKILKAKNELDKQLEKNIENIIEFATQLRNVGTVIPFESIVESESFAVGKSIGDLDFWQNTKA
TIIGVKRKGEMFLSPGPYFKIMADDIIMYVGEDEVLKNVKNYISNNE

Specific function: Unknown

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23471; Mature: 23340

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRTKTPNYIKIAIDIANRVLNNDFKEGSKITGRTTLVSIYKVSPETIRRSVALLKDMN
CCCCCCCCCEEEEEEEHHHHHHCCCHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHHCCC
VVSVNEKSGIIINSKENAKDFLSKFKAQSDFTTLSNDTYKILKAKNELDKQLEKNIENII
EEEECCCCCEEEECCCCHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHH
EFATQLRNVGTVIPFESIVESESFAVGKSIGDLDFWQNTKATIIGVKRKGEMFLSPGPYF
HHHHHHHHCCCCCCHHHHHCCCHHHHCCCCCCCHHCCCCCEEEEEEEECCCEEECCCCEE
KIMADDIIMYVGEDEVLKNVKNYISNNE
EEEECEEEEEECCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AKRTKTPNYIKIAIDIANRVLNNDFKEGSKITGRTTLVSIYKVSPETIRRSVALLKDMN
CCCCCCCCEEEEEEEHHHHHHCCCHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHHCCC
VVSVNEKSGIIINSKENAKDFLSKFKAQSDFTTLSNDTYKILKAKNELDKQLEKNIENII
EEEECCCCCEEEECCCCHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHH
EFATQLRNVGTVIPFESIVESESFAVGKSIGDLDFWQNTKATIIGVKRKGEMFLSPGPYF
HHHHHHHHCCCCCCHHHHHCCCHHHHCCCCCCCHHCCCCCEEEEEEEECCCEEECCCCEE
KIMADDIIMYVGEDEVLKNVKNYISNNE
EEEECEEEEEECCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA