Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310333

Identifier: 18310333

GI number: 18310333

Start: 1595230

End: 1596273

Strand: Reverse

Name: 18310333

Synonym: CPE1351

Alternate gene names: NA

Gene position: 1596273-1595230 (Counterclockwise)

Preceding gene: 18310335

Following gene: 18310329

Centisome position: 52.66

GC content: 27.01

Gene sequence:

>1044_bases
ATGGAATACGTAAATGATATAAATATAATAGAAGCTGTTATACATATATTAGACAGTAACAGTGATGAACCTATATTAAA
TGAGTATAAATTAGAGTTAACAGATGAAATTTATAAGTTTATATATAAACATGTAGAAAAGGGGTTAAAAAGTGAAGATT
TAAAGTATGCTGTTTTTAATCCAGAAAGACATATAGTTAAGGAAGTTTCTCAAGATTTTTTAAATGGAGTTAATAATGAT
ATAGTGGAAGTTTCTAAGGAACTAGCAAGACAGATGTTTTATATTATGAAGGCAAATATAAATATTCCAAGTTGTGATTT
ACTTACAGTATCAATATCTACAGATCAAGGACCTATGCTTGGGATTTTAAAAATGGATTACATAAAAAATTTTACTCATA
AAGTTGATTTTGTACATGATAAAATAGGAATAGGAATAGTAGAACAGGCAGCAGGACTTCCAGCATCAGGACAAAAAGTT
CAAAAGTGTGCATTTATAAAACCTATAAGAGAAGATCAAAAGGTTAATCTTATGGTAATAGATAAGAAAAAGAAATCTTC
AGAAGAGGATGAGTTATCTCTAAATTACTTTGTAGATAACTATTTAGGATGCACAGTTTTTCAAAATGAAAGAGATATGA
CAAAAACTTTTGTAAAGGCAACAGAAGAGTGGACTAGAAATAATATTATTGAAGATGCAGAAAAAGCTGAAGGTATAAGA
AGTAAAATAAAGAATAAGCTTAAAGAAGAGGAAATTATAAATATAGAAGAATTATCCCGTGAGTTATTTAATGAAGAAGA
GCCTATACTAAAGAATGATTTTACAACCTTTGTAAGAGGTCATGGCTTAGAGAATGATGTTGAAGTAGATAAACTTTGGA
TTGAAAAAAAGATGAAAAGAACTAGACTTAAAATAGATAAGGAAATAGATTTATATATTGATGATGAAGCTTATCATGAT
GACTCTAAATTTGAAATTGTGAGAAATGGTGATGGAAGCATAAATATGGTTATAAAAAATATTAAAAATTATATAGAGAA
ATAA

Upstream 100 bases:

>100_bases
ACAAATTGTTAAAGGGAGAAAAGAATAGTATGGTGATTTTTCCTTTATACTTTGATAAAATATAAGATGTGTCAAATTTA
AGAAAAGTGGGAGGAGAAAG

Downstream 100 bases:

>100_bases
AAAAAGAGATTAGAAAATCTAATCTCTTTTTTATTATTTAAAACTATTAAGCTCTGTTTACTGAACCGAATAATTCCATT
TTTTCTTTAACTGTAGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MEYVNDINIIEAVIHILDSNSDEPILNEYKLELTDEIYKFIYKHVEKGLKSEDLKYAVFNPERHIVKEVSQDFLNGVNND
IVEVSKELARQMFYIMKANINIPSCDLLTVSISTDQGPMLGILKMDYIKNFTHKVDFVHDKIGIGIVEQAAGLPASGQKV
QKCAFIKPIREDQKVNLMVIDKKKKSSEEDELSLNYFVDNYLGCTVFQNERDMTKTFVKATEEWTRNNIIEDAEKAEGIR
SKIKNKLKEEEIINIEELSRELFNEEEPILKNDFTTFVRGHGLENDVEVDKLWIEKKMKRTRLKIDKEIDLYIDDEAYHD
DSKFEIVRNGDGSINMVIKNIKNYIEK

Sequences:

>Translated_347_residues
MEYVNDINIIEAVIHILDSNSDEPILNEYKLELTDEIYKFIYKHVEKGLKSEDLKYAVFNPERHIVKEVSQDFLNGVNND
IVEVSKELARQMFYIMKANINIPSCDLLTVSISTDQGPMLGILKMDYIKNFTHKVDFVHDKIGIGIVEQAAGLPASGQKV
QKCAFIKPIREDQKVNLMVIDKKKKSSEEDELSLNYFVDNYLGCTVFQNERDMTKTFVKATEEWTRNNIIEDAEKAEGIR
SKIKNKLKEEEIINIEELSRELFNEEEPILKNDFTTFVRGHGLENDVEVDKLWIEKKMKRTRLKIDKEIDLYIDDEAYHD
DSKFEIVRNGDGSINMVIKNIKNYIEK
>Mature_347_residues
MEYVNDINIIEAVIHILDSNSDEPILNEYKLELTDEIYKFIYKHVEKGLKSEDLKYAVFNPERHIVKEVSQDFLNGVNND
IVEVSKELARQMFYIMKANINIPSCDLLTVSISTDQGPMLGILKMDYIKNFTHKVDFVHDKIGIGIVEQAAGLPASGQKV
QKCAFIKPIREDQKVNLMVIDKKKKSSEEDELSLNYFVDNYLGCTVFQNERDMTKTFVKATEEWTRNNIIEDAEKAEGIR
SKIKNKLKEEEIINIEELSRELFNEEEPILKNDFTTFVRGHGLENDVEVDKLWIEKKMKRTRLKIDKEIDLYIDDEAYHD
DSKFEIVRNGDGSINMVIKNIKNYIEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40386; Mature: 40386

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYVNDINIIEAVIHILDSNSDEPILNEYKLELTDEIYKFIYKHVEKGLKSEDLKYAVFN
CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
PERHIVKEVSQDFLNGVNNDIVEVSKELARQMFYIMKANINIPSCDLLTVSISTDQGPML
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEE
GILKMDYIKNFTHKVDFVHDKIGIGIVEQAAGLPASGQKVQKCAFIKPIREDQKVNLMVI
EHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEE
DKKKKSSEEDELSLNYFVDNYLGCTVFQNERDMTKTFVKATEEWTRNNIIEDAEKAEGIR
ECCCCCCCCHHEEHHEEHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
SKIKNKLKEEEIINIEELSRELFNEEEPILKNDFTTFVRGHGLENDVEVDKLWIEKKMKR
HHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
TRLKIDKEIDLYIDDEAYHDDSKFEIVRNGDGSINMVIKNIKNYIEK
HHHCCCCCEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MEYVNDINIIEAVIHILDSNSDEPILNEYKLELTDEIYKFIYKHVEKGLKSEDLKYAVFN
CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
PERHIVKEVSQDFLNGVNNDIVEVSKELARQMFYIMKANINIPSCDLLTVSISTDQGPML
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEE
GILKMDYIKNFTHKVDFVHDKIGIGIVEQAAGLPASGQKVQKCAFIKPIREDQKVNLMVI
EHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEE
DKKKKSSEEDELSLNYFVDNYLGCTVFQNERDMTKTFVKATEEWTRNNIIEDAEKAEGIR
ECCCCCCCCHHEEHHEEHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
SKIKNKLKEEEIINIEELSRELFNEEEPILKNDFTTFVRGHGLENDVEVDKLWIEKKMKR
HHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
TRLKIDKEIDLYIDDEAYHDDSKFEIVRNGDGSINMVIKNIKNYIEK
HHHCCCCCEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA