| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310290
Identifier: 18310290
GI number: 18310290
Start: 1548448
End: 1548957
Strand: Reverse
Name: 18310290
Synonym: CPE1308
Alternate gene names: NA
Gene position: 1548957-1548448 (Counterclockwise)
Preceding gene: 18310291
Following gene: 18310289
Centisome position: 51.1
GC content: 27.25
Gene sequence:
>510_bases ATGAATTTTACTAAGGAAAAAAAGAGATTAGATGTTAAGAGTTTATGTTTTTCAGCTATACTTATAGCAATAAGTGTTAT ATTAGCTAACTTTCCTATATTCTCTAGTATAGCATTGGATTCTATGCCAGCTTTTGTTGGAGGAATAATAATATCACCTG TAGTTGGTGGGATAATAGGACTTTTAGCTCATTTATTTGTAGCTTTAAGAACAGGATTTCCTTTAAGTTTACCAGTACAT ATTTTAGTAGCATTAGAAATGTTTGTTGTTGTATACATAACATCAATAATATTTAATAGAGGAAAAGTTATTTTAGCAGG AATAGTTGGTACTCTTTTAAATGGAATAGTATTTACTTTAATAACAGGAGTATTTATGTATTTTGTTTTAGGAGGAATGA ATCCAATAGACTTTTTAAAACTTTTAGGATTACCACTTACTTTAGCAAGCTTAGTTAATATAGTTGTAGCATTTATAGTA AGTAAGGGACTAAAAAATGCAAATATATAA
Upstream 100 bases:
>100_bases TGAAATTTTATTTAATATTAAAAGTATAACTTACTAGTTAATAGATGCCTTATAATGTAGAGAGAAGGAAAATAATATTA ATTAGGAGGGTAAAATAATT
Downstream 100 bases:
>100_bases GTTTAGAGACTTAACTGTATTAGAAAATGAAAAAAATAAACTAGTAATAGCTTGCGATAGTTGTGGTGGAATTGGTGAAA ATGAAGGGGATTTTGTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MNFTKEKKRLDVKSLCFSAILIAISVILANFPIFSSIALDSMPAFVGGIIISPVVGGIIGLLAHLFVALRTGFPLSLPVH ILVALEMFVVVYITSIIFNRGKVILAGIVGTLLNGIVFTLITGVFMYFVLGGMNPIDFLKLLGLPLTLASLVNIVVAFIV SKGLKNANI
Sequences:
>Translated_169_residues MNFTKEKKRLDVKSLCFSAILIAISVILANFPIFSSIALDSMPAFVGGIIISPVVGGIIGLLAHLFVALRTGFPLSLPVH ILVALEMFVVVYITSIIFNRGKVILAGIVGTLLNGIVFTLITGVFMYFVLGGMNPIDFLKLLGLPLTLASLVNIVVAFIV SKGLKNANI >Mature_169_residues MNFTKEKKRLDVKSLCFSAILIAISVILANFPIFSSIALDSMPAFVGGIIISPVVGGIIGLLAHLFVALRTGFPLSLPVH ILVALEMFVVVYITSIIFNRGKVILAGIVGTLLNGIVFTLITGVFMYFVLGGMNPIDFLKLLGLPLTLASLVNIVVAFIV SKGLKNANI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18030; Mature: 18030
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFTKEKKRLDVKSLCFSAILIAISVILANFPIFSSIALDSMPAFVGGIIISPVVGGIIG CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAHLFVALRTGFPLSLPVHILVALEMFVVVYITSIIFNRGKVILAGIVGTLLNGIVFTL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH ITGVFMYFVLGGMNPIDFLKLLGLPLTLASLVNIVVAFIVSKGLKNANI HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNFTKEKKRLDVKSLCFSAILIAISVILANFPIFSSIALDSMPAFVGGIIISPVVGGIIG CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAHLFVALRTGFPLSLPVHILVALEMFVVVYITSIIFNRGKVILAGIVGTLLNGIVFTL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH ITGVFMYFVLGGMNPIDFLKLLGLPLTLASLVNIVVAFIVSKGLKNANI HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA