Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310290

Identifier: 18310290

GI number: 18310290

Start: 1548448

End: 1548957

Strand: Reverse

Name: 18310290

Synonym: CPE1308

Alternate gene names: NA

Gene position: 1548957-1548448 (Counterclockwise)

Preceding gene: 18310291

Following gene: 18310289

Centisome position: 51.1

GC content: 27.25

Gene sequence:

>510_bases
ATGAATTTTACTAAGGAAAAAAAGAGATTAGATGTTAAGAGTTTATGTTTTTCAGCTATACTTATAGCAATAAGTGTTAT
ATTAGCTAACTTTCCTATATTCTCTAGTATAGCATTGGATTCTATGCCAGCTTTTGTTGGAGGAATAATAATATCACCTG
TAGTTGGTGGGATAATAGGACTTTTAGCTCATTTATTTGTAGCTTTAAGAACAGGATTTCCTTTAAGTTTACCAGTACAT
ATTTTAGTAGCATTAGAAATGTTTGTTGTTGTATACATAACATCAATAATATTTAATAGAGGAAAAGTTATTTTAGCAGG
AATAGTTGGTACTCTTTTAAATGGAATAGTATTTACTTTAATAACAGGAGTATTTATGTATTTTGTTTTAGGAGGAATGA
ATCCAATAGACTTTTTAAAACTTTTAGGATTACCACTTACTTTAGCAAGCTTAGTTAATATAGTTGTAGCATTTATAGTA
AGTAAGGGACTAAAAAATGCAAATATATAA

Upstream 100 bases:

>100_bases
TGAAATTTTATTTAATATTAAAAGTATAACTTACTAGTTAATAGATGCCTTATAATGTAGAGAGAAGGAAAATAATATTA
ATTAGGAGGGTAAAATAATT

Downstream 100 bases:

>100_bases
GTTTAGAGACTTAACTGTATTAGAAAATGAAAAAAATAAACTAGTAATAGCTTGCGATAGTTGTGGTGGAATTGGTGAAA
ATGAAGGGGATTTTGTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MNFTKEKKRLDVKSLCFSAILIAISVILANFPIFSSIALDSMPAFVGGIIISPVVGGIIGLLAHLFVALRTGFPLSLPVH
ILVALEMFVVVYITSIIFNRGKVILAGIVGTLLNGIVFTLITGVFMYFVLGGMNPIDFLKLLGLPLTLASLVNIVVAFIV
SKGLKNANI

Sequences:

>Translated_169_residues
MNFTKEKKRLDVKSLCFSAILIAISVILANFPIFSSIALDSMPAFVGGIIISPVVGGIIGLLAHLFVALRTGFPLSLPVH
ILVALEMFVVVYITSIIFNRGKVILAGIVGTLLNGIVFTLITGVFMYFVLGGMNPIDFLKLLGLPLTLASLVNIVVAFIV
SKGLKNANI
>Mature_169_residues
MNFTKEKKRLDVKSLCFSAILIAISVILANFPIFSSIALDSMPAFVGGIIISPVVGGIIGLLAHLFVALRTGFPLSLPVH
ILVALEMFVVVYITSIIFNRGKVILAGIVGTLLNGIVFTLITGVFMYFVLGGMNPIDFLKLLGLPLTLASLVNIVVAFIV
SKGLKNANI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18030; Mature: 18030

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFTKEKKRLDVKSLCFSAILIAISVILANFPIFSSIALDSMPAFVGGIIISPVVGGIIG
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAHLFVALRTGFPLSLPVHILVALEMFVVVYITSIIFNRGKVILAGIVGTLLNGIVFTL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ITGVFMYFVLGGMNPIDFLKLLGLPLTLASLVNIVVAFIVSKGLKNANI
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNFTKEKKRLDVKSLCFSAILIAISVILANFPIFSSIALDSMPAFVGGIIISPVVGGIIG
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAHLFVALRTGFPLSLPVHILVALEMFVVVYITSIIFNRGKVILAGIVGTLLNGIVFTL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ITGVFMYFVLGGMNPIDFLKLLGLPLTLASLVNIVVAFIVSKGLKNANI
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA