Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310225

Identifier: 18310225

GI number: 18310225

Start: 1450428

End: 1450634

Strand: Reverse

Name: 18310225

Synonym: CPE1243

Alternate gene names: NA

Gene position: 1450634-1450428 (Counterclockwise)

Preceding gene: 18310226

Following gene: 18310223

Centisome position: 47.85

GC content: 30.92

Gene sequence:

>207_bases
ATGGAGAAAATTCATTGTTTAGTAGATGGCTTAGGAAGTTCTACAAATAAAACTCAAGTTAAGAATGCTTTAGAAAATTT
AGATGGTGTTCAAAAGGTATGTGTAGATGTAGCTAGAGGAAGTATAGAAGTTATGTTTAATGAGCATACAAGTGAGGGTG
AAATTAAAAACTGCATAGAAAACACAGGATTTTCTATAAGAAGTTAG

Upstream 100 bases:

>100_bases
GCTAAATGGATATATGATAATATACCAGATAATACTACGGTTTTAATAGCTTAGATTACACATACTATTTTTGAACATTA
CTTTGAAAGGAGAAATTAGT

Downstream 100 bases:

>100_bases
TAAGAGTTTTTAAAAGAAACTTTATTAAAATTATAATAAACCCTATAAAAATATTCCGAGTAATCACCATAAATTATATT
GTGAATTTACTCGGAATATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MEKIHCLVDGLGSSTNKTQVKNALENLDGVQKVCVDVARGSIEVMFNEHTSEGEIKNCIENTGFSIRS

Sequences:

>Translated_68_residues
MEKIHCLVDGLGSSTNKTQVKNALENLDGVQKVCVDVARGSIEVMFNEHTSEGEIKNCIENTGFSIRS
>Mature_68_residues
MEKIHCLVDGLGSSTNKTQVKNALENLDGVQKVCVDVARGSIEVMFNEHTSEGEIKNCIENTGFSIRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7425; Mature: 7425

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS50846 HMA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKIHCLVDGLGSSTNKTQVKNALENLDGVQKVCVDVARGSIEVMFNEHTSEGEIKNCIE
CCCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHH
NTGFSIRS
HCCCCCCC
>Mature Secondary Structure
MEKIHCLVDGLGSSTNKTQVKNALENLDGVQKVCVDVARGSIEVMFNEHTSEGEIKNCIE
CCCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHH
NTGFSIRS
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA