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The map label for this gene is yocH [H]

Identifier: 18310211

GI number: 18310211

Start: 1431530

End: 1432762

Strand: Direct

Name: yocH [H]

Synonym: CPE1229

Alternate gene names: 18310211

Gene position: 1431530-1432762 (Clockwise)

Preceding gene: 18310192

Following gene: 18310220

Centisome position: 47.22

GC content: 30.9

Gene sequence:

>1233_bases
ATGCAAAAAAGAATTTTGTCAGCATTAATTGCTATGGCAATTAGTATTTCAGCTACTCATGTAGTTTTTGCTGATACAGT
AAATGATAAGAAATCTACTATACAGGAGAATAAAGTAAAATATTCACAATTAGATAATGAAGTTATTTCACTTAACTCTC
AAGTGTCAAAACTTAATAATGAAATTGAAGATTTAAATGCTAAGTTAGAAGATAATAAGGCTAAAATGAAAGATACAGAA
GAGAATTTAAAAGAGACAGAAAGCAAAGTAAGCACTTTAAAAACTGAAATAGATGAAAAACAATCTGTTTTAGGAAAAAG
AATGCGTGCTATGTATAAAAGTAAGGATTCTATGAATCCCGTAGTTTTCTTGCTTAAGTCTGAAGACTTATCAGATTTAA
TAACAAGAATAGACGCTTTAGCAAGGGTTACAGCTTTAGATAAAAATCTTATACAAAGTTTAGATGAGCAAAAAGATTCT
CTTAATAGTGATATTAAAAAGTTAGAGAGAGATAAAGCTGAACTTAAAGAATTGAAAGCTTCAACTGAGGAATCTCTTAA
AACCTTAGATAGTAAAAAAATTGAAGAACAAAAGAAAATTGATGAATTAAATAAACAAAAAGAGGCTGTTTTAGAAGTAA
TTAAAGAAAATGAAATGTCTTTAATATCCCATTCAGTTTCAGTTATAAATTCATCTTCATCAATTAATGAACTTGAAAGT
GCAGTAAGCACATTGAATCAATTAATACCACAACTTAACATTGATTCTGTAAAAGAGGCAGCTAATAATTCTGTACAAGC
TGCTAAAAATAAAATTGAATCATTAAAAGCTGAAGAAGCTAAAAAAGCAGAGGAAGCCGCTAAAAATAATGCTGCAAACT
CTTCAAATACTACTAGCAGTAATAATAGTTCTAGCCAACCTAGTAGCGATGGCAAGTATAAGAAAACACTTTCTATGGAA
GCCACTGCATATAGTGGTGGAACCTTAACAGCTATGGGACTTAAACCTGTAAGAGACCCAGGTGGAATAAGTACAATAGC
CGTTGACCCTAGTGTAATTCCTTTAGGATCAAAAGTGTACATCCCTGGTTATGGTTATGCTATAGCATCAGATACAGGTG
GAGTTATAAAGGGAAATATTATTGATCTTTATATGAACTCTCATGATGAATGTATATCTTGGGGAAGACGTCAAGTTACA
TTACACATAGTTGCTTATCCTGGTGAATGGTAA

Upstream 100 bases:

>100_bases
AGGTTAAATTTGTGTTACATTTGACTTTTATGTTATAATTCAGTAATATATGATGAAATACACTTAAGTTGTGGACAGTT
TAACTAAAGGAGTGTAGTTT

Downstream 100 bases:

>100_bases
AAAGATAAGACTTTTCGTCTTATCTTTTTCTTATTTTACTTCCAAAATTATTAAATGCCTTTAAAAAAAGAAAAATTACT
AAAAATGCTATTATTGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MQKRILSALIAMAISISATHVVFADTVNDKKSTIQENKVKYSQLDNEVISLNSQVSKLNNEIEDLNAKLEDNKAKMKDTE
ENLKETESKVSTLKTEIDEKQSVLGKRMRAMYKSKDSMNPVVFLLKSEDLSDLITRIDALARVTALDKNLIQSLDEQKDS
LNSDIKKLERDKAELKELKASTEESLKTLDSKKIEEQKKIDELNKQKEAVLEVIKENEMSLISHSVSVINSSSSINELES
AVSTLNQLIPQLNIDSVKEAANNSVQAAKNKIESLKAEEAKKAEEAAKNNAANSSNTTSSNNSSSQPSSDGKYKKTLSME
ATAYSGGTLTAMGLKPVRDPGGISTIAVDPSVIPLGSKVYIPGYGYAIASDTGGVIKGNIIDLYMNSHDECISWGRRQVT
LHIVAYPGEW

Sequences:

>Translated_410_residues
MQKRILSALIAMAISISATHVVFADTVNDKKSTIQENKVKYSQLDNEVISLNSQVSKLNNEIEDLNAKLEDNKAKMKDTE
ENLKETESKVSTLKTEIDEKQSVLGKRMRAMYKSKDSMNPVVFLLKSEDLSDLITRIDALARVTALDKNLIQSLDEQKDS
LNSDIKKLERDKAELKELKASTEESLKTLDSKKIEEQKKIDELNKQKEAVLEVIKENEMSLISHSVSVINSSSSINELES
AVSTLNQLIPQLNIDSVKEAANNSVQAAKNKIESLKAEEAKKAEEAAKNNAANSSNTTSSNNSSSQPSSDGKYKKTLSME
ATAYSGGTLTAMGLKPVRDPGGISTIAVDPSVIPLGSKVYIPGYGYAIASDTGGVIKGNIIDLYMNSHDECISWGRRQVT
LHIVAYPGEW
>Mature_410_residues
MQKRILSALIAMAISISATHVVFADTVNDKKSTIQENKVKYSQLDNEVISLNSQVSKLNNEIEDLNAKLEDNKAKMKDTE
ENLKETESKVSTLKTEIDEKQSVLGKRMRAMYKSKDSMNPVVFLLKSEDLSDLITRIDALARVTALDKNLIQSLDEQKDS
LNSDIKKLERDKAELKELKASTEESLKTLDSKKIEEQKKIDELNKQKEAVLEVIKENEMSLISHSVSVINSSSSINELES
AVSTLNQLIPQLNIDSVKEAANNSVQAAKNKIESLKAEEAKKAEEAAKNNAANSSNTTSSNNSSSQPSSDGKYKKTLSME
ATAYSGGTLTAMGLKPVRDPGGISTIAVDPSVIPLGSKVYIPGYGYAIASDTGGVIKGNIIDLYMNSHDECISWGRRQVT
LHIVAYPGEW

Specific function: Unknown

COG id: COG3584

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted, cell wall. Note=Released into the medium [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010611
- InterPro:   IPR014733
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF06725 3D; PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 44973; Mature: 44973

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKRILSALIAMAISISATHVVFADTVNDKKSTIQENKVKYSQLDNEVISLNSQVSKLNN
CHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
EIEDLNAKLEDNKAKMKDTEENLKETESKVSTLKTEIDEKQSVLGKRMRAMYKSKDSMNP
HHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VVFLLKSEDLSDLITRIDALARVTALDKNLIQSLDEQKDSLNSDIKKLERDKAELKELKA
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STEESLKTLDSKKIEEQKKIDELNKQKEAVLEVIKENEMSLISHSVSVINSSSSINELES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AVSTLNQLIPQLNIDSVKEAANNSVQAAKNKIESLKAEEAKKAEEAAKNNAANSSNTTSS
HHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NNSSSQPSSDGKYKKTLSMEATAYSGGTLTAMGLKPVRDPGGISTIAVDPSVIPLGSKVY
CCCCCCCCCCCCHHHEEEEEEEEECCCEEEEECCCCCCCCCCCEEEEECCCEECCCCEEE
IPGYGYAIASDTGGVIKGNIIDLYMNSHDECISWGRRQVTLHIVAYPGEW
ECCCCEEEECCCCCEEECCEEEEEECCCHHHHHCCCEEEEEEEEECCCCC
>Mature Secondary Structure
MQKRILSALIAMAISISATHVVFADTVNDKKSTIQENKVKYSQLDNEVISLNSQVSKLNN
CHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
EIEDLNAKLEDNKAKMKDTEENLKETESKVSTLKTEIDEKQSVLGKRMRAMYKSKDSMNP
HHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VVFLLKSEDLSDLITRIDALARVTALDKNLIQSLDEQKDSLNSDIKKLERDKAELKELKA
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STEESLKTLDSKKIEEQKKIDELNKQKEAVLEVIKENEMSLISHSVSVINSSSSINELES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AVSTLNQLIPQLNIDSVKEAANNSVQAAKNKIESLKAEEAKKAEEAAKNNAANSSNTTSS
HHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NNSSSQPSSDGKYKKTLSMEATAYSGGTLTAMGLKPVRDPGGISTIAVDPSVIPLGSKVY
CCCCCCCCCCCCHHHEEEEEEEEECCCEEEEECCCCCCCCCCCEEEEECCCEECCCCEEE
IPGYGYAIASDTGGVIKGNIIDLYMNSHDECISWGRRQVTLHIVAYPGEW
ECCCCEEEECCCCCEEECCEEEEEECCCHHHHHCCCEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]