| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310173
Identifier: 18310173
GI number: 18310173
Start: 1388384
End: 1388962
Strand: Direct
Name: 18310173
Synonym: CPE1191
Alternate gene names: NA
Gene position: 1388384-1388962 (Clockwise)
Preceding gene: 18310171
Following gene: 18310184
Centisome position: 45.8
GC content: 27.12
Gene sequence:
>579_bases TTGGCAGCAGGAAAAACACATGACAAAATTACGGTTATTATGACCCCTTTTATAGCTTCTTTCTTTTTATTTATAAATAT GATCTTCTTAGAAGACTTAGGAAGTAGCCTTGCCTTTACAATATTAGGCGTATCTGTATATATGTTTGGTGGGTATATGT TTTCTGGAGATTTAGATATTAAAAGTAGAGAATTTAGAAGATGGGGGTATTTAAAGTTTATTTGGATTCCATACCAAAAA CTATTTGAACATAGAAGTGTTTTTACACACGGATTTATATTAGGACCTATAATAAGAATACTTTATGTATCTATTATCCC TATAACAATTTCTTCATTGTTATATTCTTTTTCCATAATTAATATATCTACACCAGAAATGTTAAAGTTAGTTTTTAATT TTATGTCAAAGAATAAAATTTTATTTGGTAATATGGCTTTAGCCTTATTTTTAGGTTCTGGTCTTCATACCATAACTGAT ATGATATATAGTTATTTTAAAAGAAAATTCTCATATAAAAAGAGAAAATCAAGTAAGAAATATAGTAGAAGTAAAAGACC TTCAAGAAGGGCTGCATAA
Upstream 100 bases:
>100_bases TCAAAATAAAAGTTTTAATTTGTTAATGTAATAAATTATGTGATATTAGTACAAAATATGTTATATTATTATTATAAATA TTTTTTTGTGGGGTGATATT
Downstream 100 bases:
>100_bases TAAAAAAGGCTTAGCTTTAATAGCTAAGCCTTTTTATTTTATTGGTAATTCTATAACAAAATTGCATCCTTTTAAAGGAC CATCACTTAAATAGATTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MAAGKTHDKITVIMTPFIASFFLFINMIFLEDLGSSLAFTILGVSVYMFGGYMFSGDLDIKSREFRRWGYLKFIWIPYQK LFEHRSVFTHGFILGPIIRILYVSIIPITISSLLYSFSIINISTPEMLKLVFNFMSKNKILFGNMALALFLGSGLHTITD MIYSYFKRKFSYKKRKSSKKYSRSKRPSRRAA
Sequences:
>Translated_192_residues MAAGKTHDKITVIMTPFIASFFLFINMIFLEDLGSSLAFTILGVSVYMFGGYMFSGDLDIKSREFRRWGYLKFIWIPYQK LFEHRSVFTHGFILGPIIRILYVSIIPITISSLLYSFSIINISTPEMLKLVFNFMSKNKILFGNMALALFLGSGLHTITD MIYSYFKRKFSYKKRKSSKKYSRSKRPSRRAA >Mature_191_residues AAGKTHDKITVIMTPFIASFFLFINMIFLEDLGSSLAFTILGVSVYMFGGYMFSGDLDIKSREFRRWGYLKFIWIPYQKL FEHRSVFTHGFILGPIIRILYVSIIPITISSLLYSFSIINISTPEMLKLVFNFMSKNKILFGNMALALFLGSGLHTITDM IYSYFKRKFSYKKRKSSKKYSRSKRPSRRAA
Specific function: Unknown
COG id: COG2389
COG function: function code R; Uncharacterized metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22264; Mature: 22133
Theoretical pI: Translated: 10.84; Mature: 10.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAGKTHDKITVIMTPFIASFFLFINMIFLEDLGSSLAFTILGVSVYMFGGYMFSGDLDI CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCEEEECCCCC KSREFRRWGYLKFIWIPYQKLFEHRSVFTHGFILGPIIRILYVSIIPITISSLLYSFSII CHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE NISTPEMLKLVFNFMSKNKILFGNMALALFLGSGLHTITDMIYSYFKRKFSYKKRKSSKK ECCCHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH YSRSKRPSRRAA HHHHCCCCCCCC >Mature Secondary Structure AAGKTHDKITVIMTPFIASFFLFINMIFLEDLGSSLAFTILGVSVYMFGGYMFSGDLDI CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCEEEECCCCC KSREFRRWGYLKFIWIPYQKLFEHRSVFTHGFILGPIIRILYVSIIPITISSLLYSFSII CHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE NISTPEMLKLVFNFMSKNKILFGNMALALFLGSGLHTITDMIYSYFKRKFSYKKRKSSKK ECCCHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH YSRSKRPSRRAA HHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA