Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310164

Identifier: 18310164

GI number: 18310164

Start: 1378218

End: 1378376

Strand: Reverse

Name: 18310164

Synonym: CPE1182

Alternate gene names: NA

Gene position: 1378376-1378218 (Counterclockwise)

Preceding gene: 18310165

Following gene: 18310163

Centisome position: 45.47

GC content: 23.27

Gene sequence:

>159_bases
ATGAAAAATAGAGAATTACAAAATCATAAATGTAAAAACACAAAATGTATAACTCAAGTAGAAAAATATGTTCCTCAAAG
CTTTACTTTAGTAGATAAAAAGAATAATACATACAATTGTGATTATTGTAACGCAGAAAACACTTTTCAAAAGCATTAA

Upstream 100 bases:

>100_bases
GTAGATGAAGATTCAAGAGCATTTTACTTTAAGCAAGCCAAATGCGGAATGTATGTAAGAATGGCCTTAATGGCAAAACT
TTTAGGGGAGGCGTAATAGG

Downstream 100 bases:

>100_bases
ATTTAGGAGGACATAATTAAGATGAATTTGCTAATTAAAAATGTAAATTTAATAGATGAAAGCAACAACTTTTTTGGTGA
TATATATATAGAAAAAGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 52; Mature: 52

Protein sequence:

>52_residues
MKNRELQNHKCKNTKCITQVEKYVPQSFTLVDKKNNTYNCDYCNAENTFQKH

Sequences:

>Translated_52_residues
MKNRELQNHKCKNTKCITQVEKYVPQSFTLVDKKNNTYNCDYCNAENTFQKH
>Mature_52_residues
MKNRELQNHKCKNTKCITQVEKYVPQSFTLVDKKNNTYNCDYCNAENTFQKH

Specific function: Unknown

COG id: COG1781

COG function: function code F; Aspartate carbamoyltransferase, regulatory subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6242; Mature: 6242

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
7.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNRELQNHKCKNTKCITQVEKYVPQSFTLVDKKNNTYNCDYCNAENTFQKH
CCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKNRELQNHKCKNTKCITQVEKYVPQSFTLVDKKNNTYNCDYCNAENTFQKH
CCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA