| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is mutL [H]
Identifier: 18310138
GI number: 18310138
Start: 1353763
End: 1355787
Strand: Direct
Name: mutL [H]
Synonym: CPE1156
Alternate gene names: 18310138
Gene position: 1353763-1355787 (Clockwise)
Preceding gene: 18310137
Following gene: 18310139
Centisome position: 44.66
GC content: 28.94
Gene sequence:
>2025_bases TTGAATAGAATAAATATTTTAAATGCAGATACAGCAAATAAAATAGCTGCAGGAGAGGTTGTTGAAAGACCCTCTTCTGT GGTTAAAGAACTTGTAGAAAATTCATTAGATGCAGGGGCTAAAAATATAACTATAGAGATTCAAAATGGTGGAGAATCTC TTATAAAAATAATAGATGATGGCTCAGGGGTTCATCCAGAGGATGTTGAAAAAGCTTTTAATCCTCATGCTACAAGTAAA ATAAAAGATACTTATGATATATTCAGCATAAACACTCTTGGATTTAGAGGAGAAGCTTTGCCTAGTATAGCTTCTATAGC AAGGGTTGATTTTAAAAGTAAAACAGAAGACTTTGACATGGGTAAGGAGCTAATAATTAGTGGTGGAGAAAAAGAATCTT TAACAGATTGTTCTATGAATAGAGGAACTCAAATAGAAGTTAGGGATTTATTCTTTAATGTACCTGCTAGAAAGAAGTTT TTAAAGACAACGGCTAGAGAAAGTGCCTTAATAAATGACTTAGTAAACAGAATTTCACTAGCTAACCCAGATGTATCATT TAAATTATTTAATAACAATAAAAAAATTTTAAATACTTATGGCAATGGAAAACTAATAGATGTTATAAGAACTATTTATG GTAAATCCACTGCTGAAAATTTAATATATTTTGAAGAGCATAAGGATACAGCTTCTGTTTATGGATTTATAGGAAATGAT ACCTTAGCAAGAGCCTCTAGAAATAATCAAAGTCTTTTTGTAAATAAAAGATATGTAAAAAATAGAAGCTTAACTGTAGC TGTGGAAAATGCATTTAGGTCCTTTAATGTTACAGGTAAGTTTCCATTCTTCGTATTATTTATAGATACTTATCCAGAGC TTATAGATGTTAACATACATCCAACAAAATCTGAAATTAAATTTAAAGATGAACGTTTTATATTCAAGGTTGTTTTTGAT GCTGTTCATTCAGCTATGAGGGAATATGTAAAAGATACCTTTACTCTTCCAGAAGAAGAGGAGAAAAAATTTGAAGCTTT AAAAGAAGAAGTTATTCAGGAAAGCTTAGATAAGGAAATAAGTACCTTAGAAAAGTTAAAAGAAAATATAAATTATAAGG TAAGCGAGGATAAAAAAAAAGAAGAGATTTATTCTTATAATCCCTCTAAGGATTATGAAGCTAAAACAGAGGTTAATATT CCAGTAGATTTCTTGTCTAAAGAAAATCAGGATGAATCTTTTAGTATTAATAACTCTTTAGAAAATAATGAGTTTAAAGA GGTTTCAGCTAAAAGAGAGATTTCATATGATCCTATACTTATAAAAAATGAACTTAAAGATAAAGTAAGTGAAAGTACTT CTGAATCACTTGAAAGAAGTGACTATAAATGTAATAAGAATGAATATGGAAATTCCATAGAGGAAATAATTTATAGAGAA GCAAAATTCCCTAAGCTAAGAGTTATTGGTCAATTTAATAAAACCTATATATTAGCTGAGTATGATTCTACTTTATATTT AATAGACCAACATGCAGCTCATGAGAAGATTTTATTTGAGAAGTATTCTTCAGATATAGCTAAAAAGAAGGTTGAAATTC AGCCTCTAATGATTCCACTAGTAGTAACTTTGCCTACAGAGGATTATCTTTATTACGATGAAAATAAAGAGATTTTTGAA AAGGCAGGATTTAAAATAAGTGATTTTGGTGATAATTCTATAAGAATTGAAGAAGTACCATACTTTTTAGATAAATTAAA TCCAACAGAGCTAATAACATCTATGATAAATAACTTAAAGAAAATGGGTACTGGAGAAACTGTAGAGGTTAAATATAATA AAATAGCATCTATGTCCTGTAGGGCGGCAGTTAAGGCTAATGATGTTTTAAGCATATTAGAAATGGAAAACTTAATAGAG GATTTAAGATACATAAATGATCCTTTCCACTGTCCACATGGACGTCCAACTATAATTAAATTTACCAGTTATGAATTAGA TAAGAAGTTTAAAAGAATAACTTAA
Upstream 100 bases:
>100_bases TTTTATCTTTAAATCCTATGGAGGCTATGAATAGATTATATGCTCTAGTTAAAGAAGCTAAAAATTTAATTTAGCTTATG GGAAGGAGCTGTTATAAATT
Downstream 100 bases:
>100_bases GGAGAGATACAGTTTAAATGAATAATAATTTACTTATTATTGCTGGGCCAACAGCCGTAGGAAAAAGTGACCTTTCAGTA GATCTAGCAAAGAAGCTAAA
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 674; Mature: 674
Protein sequence:
>674_residues MNRINILNADTANKIAAGEVVERPSSVVKELVENSLDAGAKNITIEIQNGGESLIKIIDDGSGVHPEDVEKAFNPHATSK IKDTYDIFSINTLGFRGEALPSIASIARVDFKSKTEDFDMGKELIISGGEKESLTDCSMNRGTQIEVRDLFFNVPARKKF LKTTARESALINDLVNRISLANPDVSFKLFNNNKKILNTYGNGKLIDVIRTIYGKSTAENLIYFEEHKDTASVYGFIGND TLARASRNNQSLFVNKRYVKNRSLTVAVENAFRSFNVTGKFPFFVLFIDTYPELIDVNIHPTKSEIKFKDERFIFKVVFD AVHSAMREYVKDTFTLPEEEEKKFEALKEEVIQESLDKEISTLEKLKENINYKVSEDKKKEEIYSYNPSKDYEAKTEVNI PVDFLSKENQDESFSINNSLENNEFKEVSAKREISYDPILIKNELKDKVSESTSESLERSDYKCNKNEYGNSIEEIIYRE AKFPKLRVIGQFNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKKVEIQPLMIPLVVTLPTEDYLYYDENKEIFE KAGFKISDFGDNSIRIEEVPYFLDKLNPTELITSMINNLKKMGTGETVEVKYNKIASMSCRAAVKANDVLSILEMENLIE DLRYINDPFHCPHGRPTIIKFTSYELDKKFKRIT
Sequences:
>Translated_674_residues MNRINILNADTANKIAAGEVVERPSSVVKELVENSLDAGAKNITIEIQNGGESLIKIIDDGSGVHPEDVEKAFNPHATSK IKDTYDIFSINTLGFRGEALPSIASIARVDFKSKTEDFDMGKELIISGGEKESLTDCSMNRGTQIEVRDLFFNVPARKKF LKTTARESALINDLVNRISLANPDVSFKLFNNNKKILNTYGNGKLIDVIRTIYGKSTAENLIYFEEHKDTASVYGFIGND TLARASRNNQSLFVNKRYVKNRSLTVAVENAFRSFNVTGKFPFFVLFIDTYPELIDVNIHPTKSEIKFKDERFIFKVVFD AVHSAMREYVKDTFTLPEEEEKKFEALKEEVIQESLDKEISTLEKLKENINYKVSEDKKKEEIYSYNPSKDYEAKTEVNI PVDFLSKENQDESFSINNSLENNEFKEVSAKREISYDPILIKNELKDKVSESTSESLERSDYKCNKNEYGNSIEEIIYRE AKFPKLRVIGQFNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKKVEIQPLMIPLVVTLPTEDYLYYDENKEIFE KAGFKISDFGDNSIRIEEVPYFLDKLNPTELITSMINNLKKMGTGETVEVKYNKIASMSCRAAVKANDVLSILEMENLIE DLRYINDPFHCPHGRPTIIKFTSYELDKKFKRIT >Mature_674_residues MNRINILNADTANKIAAGEVVERPSSVVKELVENSLDAGAKNITIEIQNGGESLIKIIDDGSGVHPEDVEKAFNPHATSK IKDTYDIFSINTLGFRGEALPSIASIARVDFKSKTEDFDMGKELIISGGEKESLTDCSMNRGTQIEVRDLFFNVPARKKF LKTTARESALINDLVNRISLANPDVSFKLFNNNKKILNTYGNGKLIDVIRTIYGKSTAENLIYFEEHKDTASVYGFIGND TLARASRNNQSLFVNKRYVKNRSLTVAVENAFRSFNVTGKFPFFVLFIDTYPELIDVNIHPTKSEIKFKDERFIFKVVFD AVHSAMREYVKDTFTLPEEEEKKFEALKEEVIQESLDKEISTLEKLKENINYKVSEDKKKEEIYSYNPSKDYEAKTEVNI PVDFLSKENQDESFSINNSLENNEFKEVSAKREISYDPILIKNELKDKVSESTSESLERSDYKCNKNEYGNSIEEIIYRE AKFPKLRVIGQFNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKKVEIQPLMIPLVVTLPTEDYLYYDENKEIFE KAGFKISDFGDNSIRIEEVPYFLDKLNPTELITSMINNLKKMGTGETVEVKYNKIASMSCRAAVKANDVLSILEMENLIE DLRYINDPFHCPHGRPTIIKFTSYELDKKFKRIT
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=328, Percent_Identity=35.0609756097561, Blast_Score=197, Evalue=3e-50, Organism=Homo sapiens, GI310128478, Length=342, Percent_Identity=28.3625730994152, Blast_Score=142, Evalue=9e-34, Organism=Homo sapiens, GI4505913, Length=342, Percent_Identity=28.3625730994152, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI4505911, Length=326, Percent_Identity=27.9141104294479, Blast_Score=127, Evalue=4e-29, Organism=Homo sapiens, GI189458898, Length=326, Percent_Identity=27.9141104294479, Blast_Score=126, Evalue=9e-29, Organism=Homo sapiens, GI263191589, Length=234, Percent_Identity=32.0512820512821, Blast_Score=116, Evalue=7e-26, Organism=Homo sapiens, GI189458896, Length=316, Percent_Identity=27.5316455696203, Blast_Score=108, Evalue=2e-23, Organism=Homo sapiens, GI310128480, Length=295, Percent_Identity=25.7627118644068, Blast_Score=104, Evalue=3e-22, Organism=Homo sapiens, GI91992162, Length=384, Percent_Identity=25.2604166666667, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI91992160, Length=384, Percent_Identity=25.2604166666667, Blast_Score=92, Evalue=2e-18, Organism=Escherichia coli, GI1790612, Length=662, Percent_Identity=27.0392749244713, Blast_Score=219, Evalue=4e-58, Organism=Caenorhabditis elegans, GI71991825, Length=322, Percent_Identity=34.472049689441, Blast_Score=179, Evalue=5e-45, Organism=Caenorhabditis elegans, GI17562796, Length=376, Percent_Identity=26.8617021276596, Blast_Score=140, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6323819, Length=576, Percent_Identity=28.4722222222222, Blast_Score=179, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6324247, Length=413, Percent_Identity=28.8135593220339, Blast_Score=134, Evalue=4e-32, Organism=Saccharomyces cerevisiae, GI6323063, Length=371, Percent_Identity=25.6064690026954, Blast_Score=82, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6325093, Length=577, Percent_Identity=21.6637781629116, Blast_Score=80, Evalue=8e-16, Organism=Drosophila melanogaster, GI17136968, Length=312, Percent_Identity=33.3333333333333, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI17136970, Length=359, Percent_Identity=26.1838440111421, Blast_Score=128, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 77206; Mature: 77206
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1 ; PS00583 PFKB_KINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRINILNADTANKIAAGEVVERPSSVVKELVENSLDAGAKNITIEIQNGGESLIKIIDD CCCEEEECCCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEC GSGVHPEDVEKAFNPHATSKIKDTYDIFSINTLGFRGEALPSIASIARVDFKSKTEDFDM CCCCCHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCC GKELIISGGEKESLTDCSMNRGTQIEVRDLFFNVPARKKFLKTTARESALINDLVNRISL CCCEEEECCCCCCCCCCCCCCCCEEEEEHEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC ANPDVSFKLFNNNKKILNTYGNGKLIDVIRTIYGKSTAENLIYFEEHKDTASVYGFIGND CCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEECCC TLARASRNNQSLFVNKRYVKNRSLTVAVENAFRSFNVTGKFPFFVLFIDTYPELIDVNIH HHHHCCCCCCEEEEEEHHHCCCCEEEEEECHHHHCCCCCCCCEEEEEEECCCCEEEEEEC PTKSEIKFKDERFIFKVVFDAVHSAMREYVKDTFTLPEEEEKKFEALKEEVIQESLDKEI CCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH STLEKLKENINYKVSEDKKKEEIYSYNPSKDYEAKTEVNIPVDFLSKENQDESFSINNSL HHHHHHHHCCCEEECCCCCHHHHHCCCCCCCCCCCEEECCCHHHHCCCCCCCCEEECCCC ENNEFKEVSAKREISYDPILIKNELKDKVSESTSESLERSDYKCNKNEYGNSIEEIIYRE CCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHH AKFPKLRVIGQFNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKKVEIQPLMIPL CCCCEEEEEECCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHEEECEEEEEE VVTLPTEDYLYYDENKEIFEKAGFKISDFGDNSIRIEEVPYFLDKLNPTELITSMINNLK EEEECCCCCEEECCCHHHHHHCCCEEEECCCCCEEEEECCHHHHCCCHHHHHHHHHHHHH KMGTGETVEVKYNKIASMSCRAAVKANDVLSILEMENLIEDLRYINDPFHCPHGRPTIIK HCCCCCEEEEEECHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE FTSYELDKKFKRIT EECCHHHHHHHCCC >Mature Secondary Structure MNRINILNADTANKIAAGEVVERPSSVVKELVENSLDAGAKNITIEIQNGGESLIKIIDD CCCEEEECCCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEC GSGVHPEDVEKAFNPHATSKIKDTYDIFSINTLGFRGEALPSIASIARVDFKSKTEDFDM CCCCCHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCC GKELIISGGEKESLTDCSMNRGTQIEVRDLFFNVPARKKFLKTTARESALINDLVNRISL CCCEEEECCCCCCCCCCCCCCCCEEEEEHEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC ANPDVSFKLFNNNKKILNTYGNGKLIDVIRTIYGKSTAENLIYFEEHKDTASVYGFIGND CCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEECCC TLARASRNNQSLFVNKRYVKNRSLTVAVENAFRSFNVTGKFPFFVLFIDTYPELIDVNIH HHHHCCCCCCEEEEEEHHHCCCCEEEEEECHHHHCCCCCCCCEEEEEEECCCCEEEEEEC PTKSEIKFKDERFIFKVVFDAVHSAMREYVKDTFTLPEEEEKKFEALKEEVIQESLDKEI CCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH STLEKLKENINYKVSEDKKKEEIYSYNPSKDYEAKTEVNIPVDFLSKENQDESFSINNSL HHHHHHHHCCCEEECCCCCHHHHHCCCCCCCCCCCEEECCCHHHHCCCCCCCCEEECCCC ENNEFKEVSAKREISYDPILIKNELKDKVSESTSESLERSDYKCNKNEYGNSIEEIIYRE CCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHH AKFPKLRVIGQFNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKKVEIQPLMIPL CCCCEEEEEECCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHEEECEEEEEE VVTLPTEDYLYYDENKEIFEKAGFKISDFGDNSIRIEEVPYFLDKLNPTELITSMINNLK EEEECCCCCEEECCCHHHHHHCCCEEEECCCCCEEEEECCHHHHCCCHHHHHHHHHHHHH KMGTGETVEVKYNKIASMSCRAAVKANDVLSILEMENLIEDLRYINDPFHCPHGRPTIIK HCCCCCEEEEEECHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE FTSYELDKKFKRIT EECCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA