Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310110

Identifier: 18310110

GI number: 18310110

Start: 1320548

End: 1320853

Strand: Direct

Name: 18310110

Synonym: CPE1128

Alternate gene names: NA

Gene position: 1320548-1320853 (Clockwise)

Preceding gene: 18310109

Following gene: 18310111

Centisome position: 43.56

GC content: 26.14

Gene sequence:

>306_bases
ATGCAAGTTACAATTAAAGGTAAAAAATATGAAAGTGGAAAAATATTAAGAAATAAATATAAGGTTTATACAGAAGCTAG
AGACAGAATATCAGAAAAGGAAATTTATGATGATAGTGATTTAGATGAAATGGTAAGAGTAATAGTAGCTATATTCGATA
ATCAATTTACAGAAGATGATGTCAACAATGACATGGATGTATCAGATATTATTTTAAATTTTAGTTCTATGGATTTTGAA
ATAGTAGAAAAGGTCAATAAAAAAGCTGAGAAAATACAAAAGGCTTTTATGAAGGGCAAGAAATAG

Upstream 100 bases:

>100_bases
AAAGTGCAATACAAAATTGGTTTGGGCAAGTACAAGAACCAATAGAAAAATAAGAAGGTAGATTATTCTACCTTCTTTTT
TATTAGAAAGGAGATAACAT

Downstream 100 bases:

>100_bases
AAATTGATGATATATCTATTAATTGCCATTGTTTAGATAAATTTACTACTTATAATTATAAAAATTTTATAAAGCTATCT
AAAAAATATGAGAATGCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MQVTIKGKKYESGKILRNKYKVYTEARDRISEKEIYDDSDLDEMVRVIVAIFDNQFTEDDVNNDMDVSDIILNFSSMDFE
IVEKVNKKAEKIQKAFMKGKK

Sequences:

>Translated_101_residues
MQVTIKGKKYESGKILRNKYKVYTEARDRISEKEIYDDSDLDEMVRVIVAIFDNQFTEDDVNNDMDVSDIILNFSSMDFE
IVEKVNKKAEKIQKAFMKGKK
>Mature_101_residues
MQVTIKGKKYESGKILRNKYKVYTEARDRISEKEIYDDSDLDEMVRVIVAIFDNQFTEDDVNNDMDVSDIILNFSSMDFE
IVEKVNKKAEKIQKAFMKGKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11867; Mature: 11867

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVTIKGKKYESGKILRNKYKVYTEARDRISEKEIYDDSDLDEMVRVIVAIFDNQFTEDD
CEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC
VNNDMDVSDIILNFSSMDFEIVEKVNKKAEKIQKAFMKGKK
CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQVTIKGKKYESGKILRNKYKVYTEARDRISEKEIYDDSDLDEMVRVIVAIFDNQFTEDD
CEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC
VNNDMDVSDIILNFSSMDFEIVEKVNKKAEKIQKAFMKGKK
CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA