Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310106

Identifier: 18310106

GI number: 18310106

Start: 1318764

End: 1319081

Strand: Direct

Name: 18310106

Synonym: CPE1124

Alternate gene names: NA

Gene position: 1318764-1319081 (Clockwise)

Preceding gene: 18310105

Following gene: 18310107

Centisome position: 43.5

GC content: 29.87

Gene sequence:

>318_bases
ATGAATAATAGAATAAGCATTAAGAAACTAGAAGATAAAATAGTTAATGGTAGAAGGCAAAAGGGAGTTACATCAGAGTT
CTATAATTGTTGGGCAGAAATATTAGATCTGTATGGACAAGAATTATATGAAGCTATGGCAATTAAGCTAGAGAATACTA
TTGTCTTTAAGATTAGATATTGCAAAAAGCTAGAAGAACTTAGAAATAAAGAAAACTTTATAGTAGAGTGGCAAGGGCGT
AAATATAGTATCTATTACCCAGACTTTATGGGGTATAACAAGCAGTACATTAAGTTGAAATGTAAGGAAGTATTATAA

Upstream 100 bases:

>100_bases
TATGATAACAGGGGATTATATTTAGATTCTAAAAAAAATGGTTATGATAGAATGTCTAGCACTATATTAGAATTATTATC
TAATTGTGAGGGTGTTGTTA

Downstream 100 bases:

>100_bases
ATGAGTAGCTTTAGCATGGAATTTACTGGTTTAGAAGAGCTTATAAAGACTGTAGAAGAATTGGGAACAGAACAAGATTT
AGAGAAAACCAACAAAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MNNRISIKKLEDKIVNGRRQKGVTSEFYNCWAEILDLYGQELYEAMAIKLENTIVFKIRYCKKLEELRNKENFIVEWQGR
KYSIYYPDFMGYNKQYIKLKCKEVL

Sequences:

>Translated_105_residues
MNNRISIKKLEDKIVNGRRQKGVTSEFYNCWAEILDLYGQELYEAMAIKLENTIVFKIRYCKKLEELRNKENFIVEWQGR
KYSIYYPDFMGYNKQYIKLKCKEVL
>Mature_105_residues
MNNRISIKKLEDKIVNGRRQKGVTSEFYNCWAEILDLYGQELYEAMAIKLENTIVFKIRYCKKLEELRNKENFIVEWQGR
KYSIYYPDFMGYNKQYIKLKCKEVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12778; Mature: 12778

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNRISIKKLEDKIVNGRRQKGVTSEFYNCWAEILDLYGQELYEAMAIKLENTIVFKIRY
CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHH
CKKLEELRNKENFIVEWQGRKYSIYYPDFMGYNKQYIKLKCKEVL
HHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MNNRISIKKLEDKIVNGRRQKGVTSEFYNCWAEILDLYGQELYEAMAIKLENTIVFKIRY
CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHH
CKKLEELRNKENFIVEWQGRKYSIYYPDFMGYNKQYIKLKCKEVL
HHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA