| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310084
Identifier: 18310084
GI number: 18310084
Start: 1302601
End: 1303431
Strand: Direct
Name: 18310084
Synonym: CPE1102
Alternate gene names: NA
Gene position: 1302601-1303431 (Clockwise)
Preceding gene: 18310083
Following gene: 18310085
Centisome position: 42.97
GC content: 27.8
Gene sequence:
>831_bases ATGACAAAAGAACAATTAACAGAAGAATTAGAAGGTATATTAGAGAAAAGATGGTGGGCAGATTTAGAATGGGTGAAAAC AGAAGATTTTAGGCTTAGTTTATTGAAAGAAGTTATCACATTAACAGATTATTATAAAGATACAATGTTAACAGAAGATG ATGTATTAAAACTTATTAATTATTCATTTGATATATTTAACATAGCTTTAGAAAATAGTAAAGAATATATCGACGATAAA AAAGTGTTGAAAGTGGCTGCTAATCCATGTTATTGGGATGGAGAAAAAGTTTTTTTTCACGGAGAAGAATATGGATTTAC AAGCATAAAAAATATTGAATTATTTAAAAGCTTAGAATTAGGGGAAAAAATATCTTTATTAGAAGCTATGACAGGATTAG ATCAAGAAGAAAAACCCGAATATTTATGTTTATTTGAATACAAGGAAGACGAATATTTATTGGAAAGAGATTGGAGTGGC GATTTAGAATATTATACTTTAGACGAAGCAATAGATGAGTGGATGGGGAACGATGAAGAGAATATGATAGAAGAAAGTAA ATATGTTGATGAGGATAGTTATTATATACAACTACTATTAGAGTTACAAGGATATCAAGTTGTAATATTAGAACGTTCAA GATTTTTGGATCATTCACATTTAGATGAAATATATAAGTATTTAAAAGAAGGATACAAACTTATTAGAGCTGTAGACCTT GCATATGTTGAAAAAGCTGAAAAGTTAGATAAACAGGATGGATGGTATGACAATGAAAGAAGTATGCAAACATTTGTAAA CAATTGTTTATATACAACATTAGTTAAATAG
Upstream 100 bases:
>100_bases ATACGGAGTTTACAGAAACAATAAGTTTGTTAGTAGCTAAACTGTATAATAGATAAAACTTAAAGAAATACAAATCTAAA AACAAAAGGAGAGAAGTATT
Downstream 100 bases:
>100_bases ATAAAATATAATTTAAATCAAAAGGCTTATACCCAGGTATGAGCCTTATAATAACTAAAAAAGGATGGGATGGAATTTAT GAAGAAATTACAACAATACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MTKEQLTEELEGILEKRWWADLEWVKTEDFRLSLLKEVITLTDYYKDTMLTEDDVLKLINYSFDIFNIALENSKEYIDDK KVLKVAANPCYWDGEKVFFHGEEYGFTSIKNIELFKSLELGEKISLLEAMTGLDQEEKPEYLCLFEYKEDEYLLERDWSG DLEYYTLDEAIDEWMGNDEENMIEESKYVDEDSYYIQLLLELQGYQVVILERSRFLDHSHLDEIYKYLKEGYKLIRAVDL AYVEKAEKLDKQDGWYDNERSMQTFVNNCLYTTLVK
Sequences:
>Translated_276_residues MTKEQLTEELEGILEKRWWADLEWVKTEDFRLSLLKEVITLTDYYKDTMLTEDDVLKLINYSFDIFNIALENSKEYIDDK KVLKVAANPCYWDGEKVFFHGEEYGFTSIKNIELFKSLELGEKISLLEAMTGLDQEEKPEYLCLFEYKEDEYLLERDWSG DLEYYTLDEAIDEWMGNDEENMIEESKYVDEDSYYIQLLLELQGYQVVILERSRFLDHSHLDEIYKYLKEGYKLIRAVDL AYVEKAEKLDKQDGWYDNERSMQTFVNNCLYTTLVK >Mature_275_residues TKEQLTEELEGILEKRWWADLEWVKTEDFRLSLLKEVITLTDYYKDTMLTEDDVLKLINYSFDIFNIALENSKEYIDDKK VLKVAANPCYWDGEKVFFHGEEYGFTSIKNIELFKSLELGEKISLLEAMTGLDQEEKPEYLCLFEYKEDEYLLERDWSGD LEYYTLDEAIDEWMGNDEENMIEESKYVDEDSYYIQLLLELQGYQVVILERSRFLDHSHLDEIYKYLKEGYKLIRAVDLA YVEKAEKLDKQDGWYDNERSMQTFVNNCLYTTLVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33085; Mature: 32953
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKEQLTEELEGILEKRWWADLEWVKTEDFRLSLLKEVITLTDYYKDTMLTEDDVLKLIN CCHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH YSFDIFNIALENSKEYIDDKKVLKVAANPCYWDGEKVFFHGEEYGFTSIKNIELFKSLEL CCHHEEEEEECCCHHHHCHHHHHHHHCCCCEECCCEEEEECCCCCCCCCCHHHHHHHHCC GEKISLLEAMTGLDQEEKPEYLCLFEYKEDEYLLERDWSGDLEYYTLDEAIDEWMGNDEE CHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCEEEHHHHHHHHCCCCHH NMIEESKYVDEDSYYIQLLLELQGYQVVILERSRFLDHSHLDEIYKYLKEGYKLIRAVDL HHHHHHHCCCCCHHHHHEEEECCCCEEEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHH AYVEKAEKLDKQDGWYDNERSMQTFVNNCLYTTLVK HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TKEQLTEELEGILEKRWWADLEWVKTEDFRLSLLKEVITLTDYYKDTMLTEDDVLKLIN CHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH YSFDIFNIALENSKEYIDDKKVLKVAANPCYWDGEKVFFHGEEYGFTSIKNIELFKSLEL CCHHEEEEEECCCHHHHCHHHHHHHHCCCCEECCCEEEEECCCCCCCCCCHHHHHHHHCC GEKISLLEAMTGLDQEEKPEYLCLFEYKEDEYLLERDWSGDLEYYTLDEAIDEWMGNDEE CHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCEEEHHHHHHHHCCCCHH NMIEESKYVDEDSYYIQLLLELQGYQVVILERSRFLDHSHLDEIYKYLKEGYKLIRAVDL HHHHHHHCCCCCHHHHHEEEECCCCEEEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHH AYVEKAEKLDKQDGWYDNERSMQTFVNNCLYTTLVK HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA